BAC Information

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BAC

Clone NameB6Ng01-264A03
Chromosome16 (Build37)
Map Location 32,898,674 - 33,017,174
singlet/doubletdoublet
Overlap geneFyttd1, Lrch3, EG625660, Iqcg
Upstream geneMfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik
Downstream geneRpl35a, Lmln, LOC638791, Osbpl11, Snx4, Zfp148, Slc12a8, 4632417D23Rik, Heg1, Muc13, Itgb5, Umps, Kalrn, LOC100043670
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264A03.bB6Ng01-264A03.g
ACCGA068028GA068029
length1,1261,181
definitionB6Ng01-264A03.b B6Ng01-264A03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,898,674 - 32,899,802)(33,015,996 - 33,017,174)
sequence
gaattctttctgttaatacatgttctttttctatttcttgtcttttcttg
ctggtatcttatcataatttagcttggttatttactaataagcttgtgtt
ggtgcttcttgtaatccagtgatccctagcagagagcattgccagcatgg
caacgcccttcccaagttcatactcatgctcaccctgggttgtaggtctt
cactgcatgatagcccttaaataatagacttaaatattctgctttctgtg
agatctgctggggttttcgttgtttttcttttccttttaggttcagaccc
agttgaacacagaacaactgatagatgatgtggtagcaaagagaacgcgt
cagtaagtttcaatttgtttctttaagatgttgcttctgaatttacaaga
tactagctacttgaattgccacctgtcccagtgtgaaagaaataaaaccc
aaaatgaaattctttctgcagtaggtaaatggaaccttagccctcagatg
ctagataaccactgagccacatctgtagttcccaagtgacccaggcttca
ggtgtcagtttagtctctactgagttactgaactgcctctccattactta
ttccatttgaatggaagagttgccttcttcacctaccttctctcctgcgc
ctcccttcctttcttttttcttcctctgctccttcttttatgtaagtgaa
cctgtttagggaatgactagaataaagtccatagagtttttcaaaagtaa
gtttttgtccattgttcttcccaagtatgaattgtatagtgctttgtttc
taacaaagggatcagaatttgtaatttctttaaaatagctgttacttttt
gtaaaataaaatgtaaaaaaaaaaaaaaggtcacagtctagatacaatga
taagtatagttaagtgtaattttgaggagtgtaggaaatatctgaaccct
gatgctggcagtgacctttagcacaaggagacaaaacctatagaggaaat
ataataagtctgtttgctctccacaaccattaacatcatatgatgtttat
atatatgtatataccacacacacactgtatttatcctgggggcagtcctc
caaccctcagattcaacatgcatccg
gaattcccctgcttctttcttccagctccaggcctggtggcgagggtcag
tggtccggaaggaaattggcaatttcaaaatgcccaagaaagataaagat
gacagcaaagactcgaaaggcaaggagaaggagaagaggagaaagaagta
accagtttctgctgagccttctcaggcctcgagacactgggggtgctgac
ccagcgcccacctcctggctcacagacctagggagttctcactgtctgat
actctagttttcacaccccagtgagggctatcacatggctgtaggacctc
ttcagacgggactgtggggagccaagttgagtagctgtgtgagcatcctt
cttctcgctccagaaagcagctaactggctcatagttaagtcgtaaaaac
tcctgacacatctgactctgactttatgccatatgattaaagtgaaaaac
tattataagcaaaagtgaattctcacctagcatcatgtgcacgcacatgt
agttaataaacattggctctgcctgtcttgcagggcgaccattagtctag
ggttggtggtgttgggggacagcacataaaacacctcttacataagcagt
tccagtgacttttctggggacagatagggatggaagcatctgatacaaga
tggaaatggcatgtagatacacagtcctccaggggtaaagaatggggcac
gggttctccagaggctagtttagagatacacttgtcaaaggagacacaac
tatgtccatcatctggattttaagacgtaaagaaaccaaccaaaccaacc
aaccaaccaaccaaccaaccaaccaaccagtgtatatgtgggcccaggct
tggaaacgtgtgcatgccacagtgtgcagggggtggagtcagaggacagg
ttccaagaattgtttcctttctaatgtatctctttgtactatttggtctc
agaatatcaactcaagtcattggacttggcagcaagccccttttcctgct
gagcattttcattgggccctcaactgtggttttttttttttcccctgaga
agaaattgtaccttaatgttgtcctcacatattctatgatataaaagttg
acttttgatgcagggcttcatggtggcaagttggttctattcactacgta
gactaagtggcttgaagccctcagtgttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32898674_32899802
seq2: B6Ng01-264A03.b_44_1169

seq1  GAATTCTTTCTGTTAATACATGTTCTTTTTCTATTTCTTGTCTTTTCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTGTTAATACATGTTCTTTTTCTATTTCTTGTCTTTTCTTG  50

seq1  CTGGTATCTTATCATAATTTAGCTTGGTTATTTACTAATAAGCTTGTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATCTTATCATAATTTAGCTTGGTTATTTACTAATAAGCTTGTGTT  100

seq1  GGTGCTTCTTGTAATCCAGTGATCCCTAGCAGAGAGCATTGCCAGCATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTTCTTGTAATCCAGTGATCCCTAGCAGAGAGCATTGCCAGCATGG  150

seq1  CAACGCCCTTCCCAAGTTCATACTCATGCTCACCCTGGGTTGTAGGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGCCCTTCCCAAGTTCATACTCATGCTCACCCTGGGTTGTAGGTCTT  200

seq1  CACTGCATGATAGCCCTTAAATAATAGACTTAAATATTCTGCTTTCTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCATGATAGCCCTTAAATAATAGACTTAAATATTCTGCTTTCTGTG  250

seq1  AGATCTGCTGGGGTTTTCGTTGTTTTTCTTTTCCTTTTAGGTTCAGACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGCTGGGGTTTTCGTTGTTTTTCTTTTCCTTTTAGGTTCAGACCC  300

seq1  AGTTGAACACAGAACAACTGATAGATGATGTGGTAGCAAAGAGAACGCGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAACACAGAACAACTGATAGATGATGTGGTAGCAAAGAGAACGCGT  350

seq1  CAGTAAGTTTCAATTTGTTTCTTTAAGATGTTGCTTCTGAATTTACAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGTTTCAATTTGTTTCTTTAAGATGTTGCTTCTGAATTTACAAGA  400

seq1  TACTAGCTACTTGAATTGCCACCTGTCCCAGTGTGAAAGAAATAAAACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGCTACTTGAATTGCCACCTGTCCCAGTGTGAAAGAAATAAAACCC  450

seq1  AAAATGAAATTCTTTCTGCAGTAGGTAAATGGAACCTTAGCCCTCAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAATTCTTTCTGCAGTAGGTAAATGGAACCTTAGCCCTCAGATG  500

seq1  CTAGATAACCACTGAGCCACATCTGTAGTTCCCAAGTGACCCAGGCTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATAACCACTGAGCCACATCTGTAGTTCCCAAGTGACCCAGGCTTCA  550

seq1  GGTGTCAGTTTAGTCTCTACTGAGTTACTGAACTGCCTCTCCATTACTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCAGTTTAGTCTCTACTGAGTTACTGAACTGCCTCTCCATTACTTA  600

seq1  TTCCATTTGAATGGAAGAGTTGCCTTCTTCACCTACCTTCTCTCCTGCGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTGAATGGAAGAGTTGCCTTCTTCACCTACCTTCTCTCCTGCGC  650

seq1  CTCCCTTCCTTTCTTTTTTCTTCCTCTGCTCCTTCTTTTATGTAAGTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTCCTTTCTTTTTTCTTCCTCTGCTCCTTCTTTTATGTAAGTGAA  700

seq1  CCTGTTTAGGGAATGACTAGAATAAAGTCCATAGAGTTTTTCAAAAGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTAGGGAATGACTAGAATAAAGTCCATAGAGTTTTTCAAAAGTAA  750

seq1  GTTTTTGTCCATTGTTCTTCCCAAGTATGAATTGTATAGTGCTTTGTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTCCATTGTTCTTCCCAAGTATGAATTGTATAGTGCTTTGTTTC  800

seq1  TAACAAAGGGATCAGAATTTGTAATTTCTTTAAAATAGCTGTTACTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAGGGATCAGAATTTGTAATTTCTTTAAAATAGCTGTTACTTTTT  850

seq1  GTAAAATAAAATGT--AAAAAAAAAAAAGGTCACAGTCTAGATACAATGA  898
      ||||||||||||||  ||||||||||||||||||||||||||||||||||
seq2  GTAAAATAAAATGTAAAAAAAAAAAAAAGGTCACAGTCTAGATACAATGA  900

seq1  TAAGTATAGTTAAGTGTAATTTTGAGGAGTGTAGGAAATTATCTGAA-CC  947
      |||||||||||||||||||||||||||||||||||||| |||||||| ||
seq2  TAAGTATAGTTAAGTGTAATTTTGAGGAGTGTAGGAAA-TATCTGAACCC  949

seq1  TGATGCTGGCAGTGACCTTTAGCAC-AGGAGACAAAAACTATAAGAAGAA  996
      ||||||||||||||||||||||||| ||||||||||| |||| ||| |||
seq2  TGATGCTGGCAGTGACCTTTAGCACAAGGAGACAAAACCTAT-AGAGGAA  998

seq1  AATAATAATAAGTCTGTTTGCTTCTCCAACAAACATTAACATCATAATGA  1046
      |   ||||||||||||||||| ||||| |||| |||||||||||| ||||
seq2  A--TATAATAAGTCTGTTTGC-TCTCC-ACAACCATTAACATCAT-ATGA  1043

seq1  TGTTTATATATATGTATATA-CACACACACACTGTTTATTTATCCTGGGG  1095
      |||||||||||||||||||| |||||||||||||  ||||||||||||||
seq2  TGTTTATATATATGTATATACCACACACACACTG--TATTTATCCTGGGG  1091

seq1  GAAGGTCT-CATACCTCAGATTCAACATGCATCCG  1129
      | ||  || ||  ||||||||||||||||||||||
seq2  GCAGTCCTCCAACCCTCAGATTCAACATGCATCCG  1126

seq1: chr16_33015996_33017174
seq2: B6Ng01-264A03.g_66_1246 (reverse)

seq1  CACAACA-TGAGG--TTCAAGGCCAC-TAGACTACGTAGTGAATTTGAAA  46
      ||||||| |||||  ||||| ||||| ||| ||||||||||||  |  ||
seq2  CACAACACTGAGGGCTTCAA-GCCACTTAGTCTACGTAGTGAA--TAGAA  47

seq1  CCAACCTGGGCCA-CATGAGACCCTGCATCAAAAAGTTTAAATTTTATAT  95
      ||||| |  |||| |||||  |||||||||||||   | || ||||||| 
seq2  CCAACTT--GCCACCATGAAGCCCTGCATCAAAA--GTCAACTTTTATA-  92

seq1  TCATGAAATATGTGA-GAC-ACATTAAGGTAACATTTC-TCTCAGGGG-A  141
      ||||  ||||||||| ||| |||||||||||  ||||| ||||||||| |
seq2  TCATAGAATATGTGAGGACAACATTAAGGTACAATTTCTTCTCAGGGGAA  142

seq1  AAAAAAAAAACCACAGTTGAGGG-CCAATGAAATGGCTCAGCAGGAAAAG  190
      ||||||||||||||||||||||| |||||||||  |||||||||||||||
seq2  AAAAAAAAAACCACAGTTGAGGGCCCAATGAAAATGCTCAGCAGGAAAAG  192

seq1  GGGCTTGCTGCCAAGTCCAATGACTTGAGTTTGATA-TCTGAGACCCAAA  239
      ||||||||||||||||||||||||||||| |||||| ||||||| |||||
seq2  GGGCTTGCTGCCAAGTCCAATGACTTGAG-TTGATATTCTGAGA-CCAAA  240

seq1  TAGTACAAAGAGATACATTAG-AAGGAAACAATTCTTGGAACCTGTCCTC  288
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TAGTACAAAGAGATACATTAGAAAGGAAACAATTCTTGGAACCTGTCCTC  290

seq1  TGACTCCACCCCCTGCACACTGTGGCATGCACACGTTTCCAAGCCTGGGC  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCACCCCCTGCACACTGTGGCATGCACACGTTTCCAAGCCTGGGC  340

seq1  CCACATATACACTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATATACACTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTT  390

seq1  GGTTGGTTTCTTTACGTCTTAAAATCCAGATGATGGACATAGTTGTGTCT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTTTCTTTACGTCTTAAAATCCAGATGATGGACATAGTTGTGTCT  440

seq1  CCTTTGACAAGTGTATCTCTAAACTAGCCTCTGGAGAACCCGTGCCCCAT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGACAAGTGTATCTCTAAACTAGCCTCTGGAGAACCCGTGCCCCAT  490

seq1  TCTTTACCCCTGGAGGACTGTGTATCTACATGCCATTTCCATCTTGTATC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACCCCTGGAGGACTGTGTATCTACATGCCATTTCCATCTTGTATC  540

seq1  AGATGCTTCCATCCCTATCTGTCCCCAGAAAAGTCACTGGAACTGCTTAT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTTCCATCCCTATCTGTCCCCAGAAAAGTCACTGGAACTGCTTAT  590

seq1  GTAAGAGGTGTTTTATGTGCTGTCCCCCAACACCACCAACCCTAGACTAA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGGTGTTTTATGTGCTGTCCCCCAACACCACCAACCCTAGACTAA  640

seq1  TGGTCGCCCTGCAAGACAGGCAGAGCCAATGTTTATTAACTACATGTGCG  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCGCCCTGCAAGACAGGCAGAGCCAATGTTTATTAACTACATGTGCG  690

seq1  TGCACATGATGCTAGGTGAGAATTCACTTTTGCTTATAATAGTTTTTCAC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATGATGCTAGGTGAGAATTCACTTTTGCTTATAATAGTTTTTCAC  740

seq1  TTTAATCATATGGCATAAAGTCAGAGTCAGATGTGTCAGGAGTTTTTACG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCATATGGCATAAAGTCAGAGTCAGATGTGTCAGGAGTTTTTACG  790

seq1  ACTTAACTATGAGCCAGTTAGCTGCTTTCTGGAGCGAGAAGAAGGATGCT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACTATGAGCCAGTTAGCTGCTTTCTGGAGCGAGAAGAAGGATGCT  840

seq1  CACACAGCTACTCAACTTGGCTCCCCACAGTCCCGTCTGAAGAGGTCCTA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGCTACTCAACTTGGCTCCCCACAGTCCCGTCTGAAGAGGTCCTA  890

seq1  CAGCCATGTGATAGCCCTCACTGGGGTGTGAAAACTAGAGTATCAGACAG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATGTGATAGCCCTCACTGGGGTGTGAAAACTAGAGTATCAGACAG  940

seq1  TGAGAACTCCCTAGGTCTGTGAGCCAGGAGGTGGGCGCTGGGTCAGCACC  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACTCCCTAGGTCTGTGAGCCAGGAGGTGGGCGCTGGGTCAGCACC  990

seq1  CCCAGTGTCTCGAGGCCTGAGAAGGCTCAGCAGAAACTGGTTACTTCTTT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGTCTCGAGGCCTGAGAAGGCTCAGCAGAAACTGGTTACTTCTTT  1040

seq1  CTCCTCTTCTCCTTCTCCTTGCCTTTCGAGTCTTTGCTGTCATCTTTATC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTCTCCTTCTCCTTGCCTTTCGAGTCTTTGCTGTCATCTTTATC  1090

seq1  TTTCTTGGGCATTTTGAAATTGCCAATTTCCTTCCGGACCACTGACCCTC  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGGGCATTTTGAAATTGCCAATTTCCTTCCGGACCACTGACCCTC  1140

seq1  GCCACCAGGCCTGGAGCTGGAAGAAAGAAGCAGGGGAATTC  1179
      |||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCAGGCCTGGAGCTGGAAGAAAGAAGCAGGGGAATTC  1181