BAC Information

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BAC

Clone NameB6Ng01-264D12
Chromosome16 (Build37)
Map Location 90,181,979 - 90,307,107
singlet/doubletdoublet
Overlap geneLOC100040440, Sod1, Sfrs15
Upstream geneLOC100040288, EG622935, EG622981, EG622998, EG623011, EG623026, LOC100040346, EG623049, LOC100040415, EG640636, LOC640652, LOC640654, LOC100040425, LOC100040374, LOC640656, LOC100040445, LOC100040456, Krtap21-1, Krtap6-2, 5430433J05Rik, Tiam1, LOC100040496, LOC640694
Downstream geneLOC545175, Hunk, 2610039C10Rik, Mrap, 4921511H13Rik, 4931408A02Rik, LOC665863, 1110004E09Rik, 4930534H18Rik, Synj1, 1810007M14Rik, 4932438H23Rik, H3f3a-ps2, Olig2, Olig1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264D12.bB6Ng01-264D12.g
ACCGA068178GA068179
length492776
definitionB6Ng01-264D12.b B6Ng01-264D12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,181,979 - 90,182,476)(90,306,335 - 90,307,107)
sequence
ttccgaagactctctgttaaaccaggcagagtctgcccatggattgaggc
caggtggagttggcacacttggttggcagtgtaaatcccttatctgggcg
cctccttttccttttattttaccatggccagtggaaacctgccaccaact
gccaagcctcgtcgttgtcccaacatgctccaggtgcggggagcagaggt
tctccaccctttctgcaggtgttaggtaacagtgcctctccctacccact
ctaccgtgtctctggaatgagggctctcctgtaaaacagctctctcctgc
aggttttcatcctctctgaatcgaattgctaaacaaacccagtaacagaa
gcaagtctaaggtcaagcaagccacagcaatgctgtaaccatgggaagaa
atcacaagagttcaatggccactggattcacaccagcagagccaagaaag
cgtcctctgatggtgatggtgatggtgatggtgatggtgatg
gaattccctgtaatcccgccctggttaccctccatgcctctccctcataa
gttcaaagggaactgccctacctgattggtcgctctttattgtggttatt
tggtatatctttctttcttcctttccttctttctttctttctttcttatt
tatttatttttggtttttcgagacagggtttctctgtgtagccctgactg
tcctataactcactctgtagaccaggctagcctcgaattcagagatcctc
ctgcctctgtctcccaagtgctggctgggattaaaggcgtgcgccaccgc
tacctggcaattcgactatttctaaacatcatataaatagtgttataaac
ttgtttttctgagactcttgttgttgttgttgttgatgatgatgatgatg
ttcaagttcagggcctagagagcctcctatagggaggtctgagcgtgcta
tctactcattggccttcattctgttttgtgagctcagtttcacgtattct
ttggtccgtgaatgtgtgcatgggttccttatttgtgtattgtctctagc
acatgtgatgctaaggccaagggctgagcttatttagtagagcacgcgtt
taacctatgtgaggctgtgaagggccttgctaggtaagacaagcaggcga
gcagagtgacaccgttaggggccgccccagaaagggtctcagatctagca
agatgcacaatccttttgaggcagaatgcccacagtatatgctcctggat
tcgaactacccactgatggttgtact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_90181979_90182476
seq2: B6Ng01-264D12.b_45_542

seq1  GAATTCTTCCGAAGACTCTCTGTTAAACCAGGCAGAGTCTGCCCATGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCGAAGACTCTCTGTTAAACCAGGCAGAGTCTGCCCATGGAT  50

seq1  TGAGGCCAGGTGGAGTTGGCACACTTGGTTGGCAGTGTAAATCCCTTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCAGGTGGAGTTGGCACACTTGGTTGGCAGTGTAAATCCCTTATC  100

seq1  TGGGCGCCTCCTTTTCCTTTTATTTTACCATGGCCAGTGGAAACCTGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCGCCTCCTTTTCCTTTTATTTTACCATGGCCAGTGGAAACCTGCCA  150

seq1  CCAACTGCCAAGCCTCGTCGTTGTCCCAACATGCTCCAGGTGCGGGGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGCCAAGCCTCGTCGTTGTCCCAACATGCTCCAGGTGCGGGGAGC  200

seq1  AGAGGTTCTCCACCCTTTCTGCAGGTGTTAGGTAACAGTGCCTCTCCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTCTCCACCCTTTCTGCAGGTGTTAGGTAACAGTGCCTCTCCCTA  250

seq1  CCCACTCTACCGTGTCTCTGGAATGAGGGCTCTCCTGTAAAACAGCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCTACCGTGTCTCTGGAATGAGGGCTCTCCTGTAAAACAGCTCTC  300

seq1  TCCTGCAGGTTTTCATCCTCTCTGAATCGAATTGCTAAACAAACCCAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCAGGTTTTCATCCTCTCTGAATCGAATTGCTAAACAAACCCAGTA  350

seq1  ACAGAAGCAAGTCTAAGGTCAAGCAAGCCACAGCAATGCTGTAACCATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGCAAGTCTAAGGTCAAGCAAGCCACAGCAATGCTGTAACCATGG  400

seq1  GAAGAAATCACAAGAGTTCAATGGCCACTGGATTCACACCAGCAGAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAATCACAAGAGTTCAATGGCCACTGGATTCACACCAGCAGAGCCA  450

seq1  AGAAAGCGTCCTCTGATGGTGATGGTGATGGTGATGGTGATGGTGATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCGTCCTCTGATGGTGATGGTGATGGTGATGGTGATGGTGATG  498

seq1: chr16_90306335_90307107
seq2: B6Ng01-264D12.g_68_843 (reverse)

seq1  AGTACAACCATCAGTGGGTAATTCGTATCCAGGAGCA-AAACTGTGGGCA  49
      |||||||||||||||||||| |||| ||||||||||| | ||||||||||
seq2  AGTACAACCATCAGTGGGTAGTTCGAATCCAGGAGCATATACTGTGGGCA  50

seq1  TTCTGCCTCAAAAGGATTGTGCATCTTGCTAGATCTGAGACCCTTTCTGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCTCAAAAGGATTGTGCATCTTGCTAGATCTGAGACCCTTTCTGG  100

seq1  GGCGGCCCCTAACGGTGTC-CTCTGCTCGCCTGCTTGTCTTACCTAGCAA  148
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGCGGCCCCTAACGGTGTCACTCTGCTCGCCTGCTTGTCTTACCTAGCAA  150

seq1  GGCCCTTCACAGCCTCACATAGGTTGAACGCGTGCTCTACT-ACTAAGCT  197
      ||||||||||||||||||||||||| ||||||||||||||| | ||||||
seq2  GGCCCTTCACAGCCTCACATAGGTTAAACGCGTGCTCTACTAAATAAGCT  200

seq1  CAGCCCTTGGCCTTAGCATCACATGTGCTAGAGACAATACACAAATAAGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTTGGCCTTAGCATCACATGTGCTAGAGACAATACACAAATAAGG  250

seq1  AACCCATGCACACATTCACGGACCAAAGAATACGTGAAACTGAGCTCACA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATGCACACATTCACGGACCAAAGAATACGTGAAACTGAGCTCACA  300

seq1  AAACAGAATGAAGGCCAATGAGTAGATAGCACGCTCAGACCTCCCTATAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAATGAAGGCCAATGAGTAGATAGCACGCTCAGACCTCCCTATAG  350

seq1  GAGGCTCTCTAGGCCCTGAACTTGAACATCATCATCATCATCAACAACAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCTCTAGGCCCTGAACTTGAACATCATCATCATCATCAACAACAA  400

seq1  CAACAACAAGAGTCTCAGAAAAACAAGTTTATAACACTATTTATATGATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAAGAGTCTCAGAAAAACAAGTTTATAACACTATTTATATGATG  450

seq1  TTTAGAAATAGTCGAATTGCCAGGTAGCGGTGGCGCACGCCTTTAATCCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAATAGTCGAATTGCCAGGTAGCGGTGGCGCACGCCTTTAATCCC  500

seq1  AGCCAGCACTTGGGAGACAGAGGCAGGAGGATCTCTGAATTCGAGGCTAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCACTTGGGAGACAGAGGCAGGAGGATCTCTGAATTCGAGGCTAG  550

seq1  CCTGGTCTACAGAGTGAGTTATAGGACAGTCAGGGCTACACAGAGAAACC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCTACAGAGTGAGTTATAGGACAGTCAGGGCTACACAGAGAAACC  600

seq1  CTGTCTCGAAAAACCAAAAATAAATAAATAAGAAAGAAAGAAAGAAAGAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCGAAAAACCAAAAATAAATAAATAAGAAAGAAAGAAAGAAAGAA  650

seq1  GGAAAGGAAGAAAGAAAGATATACCAAATAACCACAATAAAGAGCGACCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGAAGAAAGAAAGATATACCAAATAACCACAATAAAGAGCGACCA  700

seq1  ATCAGGTAGGGCAGTTCCCTTTGAACTTATGAGGGAGAGGCATGGAGGGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGTAGGGCAGTTCCCTTTGAACTTATGAGGGAGAGGCATGGAGGGT  750

seq1  AACCAGGGCGGGATTACAGGGAATTC  773
      ||||||||||||||||||||||||||
seq2  AACCAGGGCGGGATTACAGGGAATTC  776