BAC Information

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BAC

Clone NameB6Ng01-264N10
Chromosome16 (Build37)
Map Location 32,226,412 - 32,397,083
singlet/doubletdoublet
Overlap geneFbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7
Upstream genePpp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6
Downstream geneTm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791, Osbpl11, Snx4, Zfp148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264N10.bB6Ng01-264N10.g
ACCGA068642GA068643
length1,0901,128
definitionB6Ng01-264N10.b B6Ng01-264N10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,226,412 - 32,227,498)(32,395,959 - 32,397,083)
sequence
gaattcaggacctctggaagaccagttagtgctcttaaccactgagcgat
ctctccagccccacttcaaactatcttgctcatctattttaacttttttt
tttgtcctgaaaggtggttttctggttcaaaggcaaattacctgaaaacc
tgtaaaaataccagtatgaatttttgaacccatcctcccaattggcagca
tttacctggccatcttttaaaagcattgcccagtacatggtatcgtggta
tcttgtgatcaatgtatacatggcaaaacttacttgaatcaattagtctg
tttatctatctggtcgaggctgacctcaaacttgttacgtagctgaagat
ggccatgaattcggtcttcctgcctccacctcttaagtgctggatcacag
gtttaccggcaaagccaatgagcaaagtaagttcatcatagctttttaaa
aacgtttttctttcttgaaccaggctctcactatggagtctcagccagcc
tggaactcagagatctgcctgcttctgcctccggattgctgagatcaaag
gtgtgcaacaccacagccaggctttttacgtttatctggtatgtgcatgc
atgttcatgctgtggtgcacatgtgtgacggtcagggataacttggagtc
agttttctccttccattgtatggattctggggaataaactcaaatcctca
ggctcaatgccaagagctcttacccccgagccatctctgcccctaccagc
agcccctttagtgggtctccattcaccatctacctcaactacaaattagt
tccaactactttttgaatagtttttcttgacacatgtctaaactgaaatc
actactacctagctgttactcccttttgcctccctgtcataatgaagagc
cagctctattattctcagcacaccatggcaacatgtcttgctcttggtgt
acaaatcatgtccactgacctttttatttttttggcatgtgtataggtag
atgtcatgtgtgtgtgcatgtgtgtgtttggctaagattttttgtcaact
tggacaatagctagaagtctttgggagacaagaacctcac
gaattcactcctgcaagttgtcctctgacctccacacaagtgctgtctca
cacacacacacacacacacacacacacacacacacacacacacacacaca
cacataaatgtaacttttaaaattttatgaaacatctccatgcatacttg
ccataaacaggtttgcaaaggccagcatctggtcagtttcctcaccccgc
tcagcttttgagagcaacagagtgctggcgctggtaagcatcctttctca
tctgtgctggcctcagaatttggctcttacagatgtgacccagacttcac
agtgcatttgcaggcaggagcaaaggaatgttggaagtcagattatgaat
agggctggggtgggagagttaatgccacagaaggcttcctcgggatgaaa
ggcctaggaaaaataggacagatgtttcattctcagggatactgagagtt
gagccaggagaagaggaagctaacagaaggtggaggaagggaaaggggaa
atgacaggcccagcaggccagctgttttccagtcttcttcagaatgacta
attctccttcactgatagctgacagaatagcgcacattcccttaatagga
ggaaaaaggaagtttcaggaggttgaaagagaccccatcagtgacctgag
aggaagtctggatgttttgtttttacttccttagtatagaaatattgcta
acttgagcctactcaagctaggcttcgatcccagtgcactgaaactgctt
ttggttttagtgactgaccagtaaacacttaactgccccttgtagcatga
gatgtggttagatctggattactgagcatgcccccactggttccccgggg
tctcctccctcattagcagacccttcatgacagggcgatcctaggcttgg
gcccctccaaggaactggacttcctctcagcactgagctccacctaatac
cactatttctcaagatctgattccaatcccccttccttctttcttttctg
gtgtcagttttcctgggaattagaagtaccacagggagaaataagatcga
ttgcaatcatgtctgatgcattcaacaggtgccacattgtcagaaactga
gtcactcatgtttcctccaccccagatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32226412_32227498
seq2: B6Ng01-264N10.b_51_1140

seq1  GAATTCAGGACCTCTGGAAGACCAGTTAGTGCTCTTAACCACTGAGCGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACCTCTGGAAGACCAGTTAGTGCTCTTAACCACTGAGCGAT  50

seq1  CTCTCCAGCCCCACTTCAAACTATCTTGCTCATCTATTTTAACTTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGCCCCACTTCAAACTATCTTGCTCATCTATTTTAACTTTTTTT  100

seq1  TTTGTCCTGAAAGGTGGTTTTCTGGTTCAAAGGCAAATTACCTGAAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCTGAAAGGTGGTTTTCTGGTTCAAAGGCAAATTACCTGAAAACC  150

seq1  TGTAAAAATACCAGTATGAATTTTTGAACCCATCCTCCCAATTGGCAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAATACCAGTATGAATTTTTGAACCCATCCTCCCAATTGGCAGCA  200

seq1  TTTACCTGGCCATCTTTTAAAAGCATTGCCCAGTACATGGTATCGTGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTGGCCATCTTTTAAAAGCATTGCCCAGTACATGGTATCGTGGTA  250

seq1  TCTTGTGATCAATGTATACATGGCAAAACTTACTTGAATCAATTAGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGATCAATGTATACATGGCAAAACTTACTTGAATCAATTAGTCTG  300

seq1  TTTATCTATCTGGTCGAGGCTGACCTCAAACTTGTTACGTAGCTGAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTATCTGGTCGAGGCTGACCTCAAACTTGTTACGTAGCTGAAGAT  350

seq1  GGCCATGAATTCGGTCTTCCTGCCTCCACCTCTTAAGTGCTGGATCACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGAATTCGGTCTTCCTGCCTCCACCTCTTAAGTGCTGGATCACAG  400

seq1  GTTTACCGGCAAAGCCAATGAGCAAAGTAAGTTCATCATAGCTTTTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCGGCAAAGCCAATGAGCAAAGTAAGTTCATCATAGCTTTTTAAA  450

seq1  AACGTTTTTCTTTCTTGAACCAGGCTCTCACTATGGAGTCTCAGCCAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTTTTCTTTCTTGAACCAGGCTCTCACTATGGAGTCTCAGCCAGCC  500

seq1  TGGAACTCAGAGATCTGCCTGCTTCTGCCTCCGGATTGCTGAGATCAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTCAGAGATCTGCCTGCTTCTGCCTCCGGATTGCTGAGATCAAAG  550

seq1  GTGTGCAACACCACAGCCAGGCTTTTTACGTTTATCTGGTATGTGCATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCAACACCACAGCCAGGCTTTTTACGTTTATCTGGTATGTGCATGC  600

seq1  ATGTTCATGCTGTGGTGCACATGTGTGACGGTCAGGGATAACTTGGAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCATGCTGTGGTGCACATGTGTGACGGTCAGGGATAACTTGGAGTC  650

seq1  AGTTTTCTCCTTCCATTGTATGGATTCTGGGGAATAAACTCAAATCCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCTCCTTCCATTGTATGGATTCTGGGGAATAAACTCAAATCCTCA  700

seq1  GGCTCAATGCCAAGAGCTCTTACCCCCGAGCCATCTCTGCCCCTACCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAATGCCAAGAGCTCTTACCCCCGAGCCATCTCTGCCCCTACCAGC  750

seq1  AGCCCCTTTAGTGGGTCTCCATTCACCATCTACCTCAACTACAAATTAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTTTAGTGGGTCTCCATTCACCATCTACCTCAACTACAAATTAGT  800

seq1  TCCAACTACTTTTTGAATAGTTTTTCTTGACACATGTCTAAACTGAAATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTACTTTTTGAATAGTTTTTCTTGACACATGTCTAAACTGAAATC  850

seq1  ACTACTACCTAGCTGTTACTCCCTTTTGCCTCCCTGTCATAATGAAGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTACCTAGCTGTTACTCCCTTTTGCCTCCCTGTCATAATGAAGAGC  900

seq1  CAGCTCTATTATTCTCAGCACACCATGGCAACAATGTCTTGCTCTTGGTG  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAGCTCTATTATTCTCAGCACACCATGGCAAC-ATGTCTTGCTCTTGGTG  949

seq1  TACAAATCATGTCCACTGACCTTTTTATTTTTTTGGCATGTGTATAGGTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATCATGTCCACTGACCTTTTTATTTTTTTGGCATGTGTATAGGTA  999

seq1  GATGTTCATGTGTGTGTGCATGTGTGTTGTTTGGCT-AGA-TTTTTGTCA  1048
      |||| ||||||||||||||||||||| ||||||||| ||| |||||||||
seq2  GATG-TCATGTGTGTGTGCATGTGTG-TGTTTGGCTAAGATTTTTTGTCA  1047

seq1  ACTT-GACATAAGCTAG-AGTCTTT-GGAGACAAGAA-CTCAC  1087
      |||| ||||  |||||| ||||||| ||||||||||| |||||
seq2  ACTTGGACAATAGCTAGAAGTCTTTGGGAGACAAGAACCTCAC  1090

seq1: chr16_32395959_32397083
seq2: B6Ng01-264N10.g_69_1196 (reverse)

seq1  GATCTGGGGT-GAGGAAACATGAGTGACTCAAGTTTCTGAC-ATGTGGGC  48
      |||||||||| ||||||||||||||||||| |||||||||| |||| |||
seq2  GATCTGGGGTGGAGGAAACATGAGTGACTC-AGTTTCTGACAATGT-GGC  48

seq1  ACCTTGTTGAATGCATCAGACATGATTGCCAAATCGATCTTA-TTCTCCC  97
      ||| |||||||||||||||||||||||||  ||||||||||| |||||||
seq2  ACC-TGTTGAATGCATCAGACATGATTGC--AATCGATCTTATTTCTCCC  95

seq1  TGTGGTAACTTCTAATT-CCAGGAAAACTGACACCAG-AAAGAAAGA--G  143
      |||||| |||||||||| ||||||||||||||||||| |||||||||  |
seq2  TGTGGT-ACTTCTAATTCCCAGGAAAACTGACACCAGAAAAGAAAGAAGG  144

seq1  GAGGGGGATTGGAATCAGATC-TGAGAAATAGTGGTA-TAGGTGGAGCTC  191
       |||||||||||||||||||| ||||||||||||||| ||||||||||||
seq2  AAGGGGGATTGGAATCAGATCTTGAGAAATAGTGGTATTAGGTGGAGCTC  194

seq1  AGTGCTGAGAGGGAGTCCAGTTCCTTGGAGGGGCCAAAGCCTAGGATCGC  241
      |||||||||||| |||||||||||||||||||||| ||||||||||||||
seq2  AGTGCTGAGAGGAAGTCCAGTTCCTTGGAGGGGCCCAAGCCTAGGATCGC  244

seq1  CCTGTCATGAAGGGTCTGCTAATGAGGGAGGAGACCCCGGGGAACCAGTG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCATGAAGGGTCTGCTAATGAGGGAGGAGACCCCGGGGAACCAGTG  294

seq1  GGGGCATGCTCAGTAATCCAGATCTAACCACATCTCATGCTACAAGGGGC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATGCTCAGTAATCCAGATCTAACCACATCTCATGCTACAAGGGGC  344

seq1  AGTTAAGTGTTTACTGGTCAGTCACTAAAACCAAAAGCAGTTTCAGTGCA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGTGTTTACTGGTCAGTCACTAAAACCAAAAGCAGTTTCAGTGCA  394

seq1  CTGGGATCGAAGCCTAGCTTGAGTAGGCTCAAGTTAGCAATATTTCTATA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATCGAAGCCTAGCTTGAGTAGGCTCAAGTTAGCAATATTTCTATA  444

seq1  CTAAGGAAGTAAAAACAAAACATCCAGACTTCCTCTCAGGTCACTGATGG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGAAGTAAAAACAAAACATCCAGACTTCCTCTCAGGTCACTGATGG  494

seq1  GGTCTCTTTCAACCTCCTGAAACTTCCTTTTTCCTCCTATTAAGGGAATG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTTTCAACCTCCTGAAACTTCCTTTTTCCTCCTATTAAGGGAATG  544

seq1  TGCGCTATTCTGTCAGCTATCAGTGAAGGAGAATTAGTCATTCTGAAGAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCTATTCTGTCAGCTATCAGTGAAGGAGAATTAGTCATTCTGAAGAA  594

seq1  GACTGGAAAACAGCTGGCCTGCTGGGCCTGTCATTTCCCCTTTCCCTTCC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGAAAACAGCTGGCCTGCTGGGCCTGTCATTTCCCCTTTCCCTTCC  644

seq1  TCCACCTTCTGTTAGCTTCCTCTTCTCCTGGCTCAACTCTCAGTATCCCT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTTCTGTTAGCTTCCTCTTCTCCTGGCTCAACTCTCAGTATCCCT  694

seq1  GAGAATGAAACATCTGTCCTATTTTTCCTAGGCCTTTCATCCCGAGGAAG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGAAACATCTGTCCTATTTTTCCTAGGCCTTTCATCCCGAGGAAG  744

seq1  CCTTCTGTGGCATTAACTCTCCCACCCCAGCCCTATTCATAATCTGACTT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGTGGCATTAACTCTCCCACCCCAGCCCTATTCATAATCTGACTT  794

seq1  CCAACATTCCTTTGCTCCTGCCTGCAAATGCACTGTGAAGTCTGGGTCAC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATTCCTTTGCTCCTGCCTGCAAATGCACTGTGAAGTCTGGGTCAC  844

seq1  ATCTGTAAGAGCCAAATTCTGAGGCCAGCACAGATGAGAAAGGATGCTTA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAAGAGCCAAATTCTGAGGCCAGCACAGATGAGAAAGGATGCTTA  894

seq1  CCAGCGCCAGCACTCTGTTGCTCTCAAAAGCTGAGCGGGGTGAGGAAACT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCGCCAGCACTCTGTTGCTCTCAAAAGCTGAGCGGGGTGAGGAAACT  944

seq1  GACCAGATGCTGGCCTTTGCAAACCTGTTTATGGCAAGTATGCATGGAGA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGATGCTGGCCTTTGCAAACCTGTTTATGGCAAGTATGCATGGAGA  994

seq1  TGTTTCATAAAATTTTAAAAGTTACATTTATGTGTGTGTGTGTGTGTGTG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCATAAAATTTTAAAAGTTACATTTATGTGTGTGTGTGTGTGTGTG  1044

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGACAGCACTTGTG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGACAGCACTTGTG  1094

seq1  TGGAGGTCAGAGGACAACTTGCAGGAGTGAATTC  1125
      ||||||||||||||||||||||||||||||||||
seq2  TGGAGGTCAGAGGACAACTTGCAGGAGTGAATTC  1128