BAC Information

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BAC

Clone NameB6Ng01-264O10
Chromosome16 (Build37)
Map Location 57,429,202 - 57,526,695
singlet/doubletdoublet
Overlap gene2610528E23Rik, 4631422O05Rik
Upstream geneAbi3bp, Tfg, Gpr128, Tmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23, Tmem30c
Downstream geneCol8a1, LOC435480, LOC629342, LOC100043477, Dcbld2, St3gal6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264O10.bB6Ng01-264O10.g
ACCGA068688GA068689
length8691,122
definitionB6Ng01-264O10.b B6Ng01-264O10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,429,202 - 57,430,069)(57,525,567 - 57,526,695)
sequence
cagagcactaaccgacattacttaaaatagaaccagggagcagggcaccg
tcttctcctggcatctgcggacccaccaggactttccccaccacactcaa
ggcacctgtgcttcagttaccatggatgccacccctcccccgtccccatg
agtcaacatcttcaggtccccatacttttcactatttagcttcctggggc
agggttagcaagcaatggtcagtaggtcaaatcagcccccaacctgtaga
gtcaacagtaagaatggcttttacattttggaataagttgaacatttgga
agactcatgaagaacggggctaactttttgtgctaacaaagttttatgaa
ggcatagccaggcacgttgattcagattatgtcagtggagtttggtgagg
gactcattgatgtagggctagcacagactgtaagatattctgactgactg
ttcacagaaaaggtttggtgatgctgccctaaaaggccttcccatggaag
cgaagcaaatgcctgtgctacactgtcctcccttcctcttggcttcactg
ttccagttccccaggcttgggaaggaaagcttagctgaaggctggcagcc
gagtaagacggcaagaagagaagggcacggggaccagacggtgagggtct
tctttagatattgagtctttacgttgacgctggaccttctaggctcacaa
cctatttttttctcttgctggggtttcaacttctttgcctttggggggaa
aaatcctatactcactcactagatcattatgataaatatgtgaaatctta
tcactatctcctctcttactgtcagtcccaagtcaacccaagatctaagg
gggggggggggaagaattt
gaattctctaagttctctaactgttgccgaatttagaaagccagtgctct
aatggggacatttctgaaacaaggggatggttaaagtggcctagtttggg
aacataggtgtaaacagaggtgaaaagaatgcagaacaacttttgggacc
cttcagcatcttctcgtgagtcccttccttatctgactcagcatcaagca
cagaatgaaaagagaaagggcttagagctaagtttgggtgtggtgtggaa
cctccaaaatacacttactttttatatctgtgtgtgtacacgtgaaagtg
aacacgcacagggttgtggacaccatggatgtctgattcggaacctttta
gcaggaagaagtggggcatcaaacagctttagaaccactcagttgtatcc
taattatgtgttaggcactatctcccaagggtaacaatatgatgaaaaat
cactttggagcagaaatgtgaactcacagctggggcagcatttgttttag
gtgaagcagccgttcctaatggcaagagagaagaggacagtgggtttaat
gggaagagtttcctttgtacaaaaagcaataatatggctagcagtgggct
gttaaaagaaaaaaattaacatttgatccatcttgtcattcttctgatag
gttaaaaagcacacacgcgcgagcacacacacacacacacacacacacac
aacccaggctgcacacttcagtcagctcttagggtctacagttgctatca
ggtcagtacacttagatgactttgctgcgtatttttaccacatttttatt
gcatttgcattcagctgcccattggattctcaggttgcctgcaaagtagg
tgctgagagtcttggtctgcaacccttttcctgttctttcactagagtga
gcccttcagactcagagttcatttatcattgtcaacagagctgtcgtcat
ccaacaagaagtgaatgagaaattttacttctttaggccagaagtcttat
tgagagctgagattttattaagaaaaagggctgattatttaatagttaag
gctcagtttccgatcagctacgtattgctctttatagtaatcatagtcta
ggctatcaaatccatggaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_57429202_57430069
seq2: B6Ng01-264O10.b_54_922

seq1  CAGAGCACTAACCGACATTACTTAAAATAGAACCAGGGAGCAGGGCACCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCACTAACCGACATTACTTAAAATAGAACCAGGGAGCAGGGCACCG  50

seq1  TCTTCTCCTGGCATCTGCGGACCCACCAGGACTTTCCCCACCACACTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCCTGGCATCTGCGGACCCACCAGGACTTTCCCCACCACACTCAA  100

seq1  GGCACCTGTGCTTCAGTTACCATGGATGCCACCCCTCCCCCGTCCCCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCTGTGCTTCAGTTACCATGGATGCCACCCCTCCCCCGTCCCCATG  150

seq1  AGTCAACATCTTCAGGTCCCCATACTTTTCACTATTTAGCTTCCTGGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAACATCTTCAGGTCCCCATACTTTTCACTATTTAGCTTCCTGGGGC  200

seq1  AGGGTTAGCAAGCAATGGTCAGTAGGTCAAATCAGCCCCCAACCTGTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTAGCAAGCAATGGTCAGTAGGTCAAATCAGCCCCCAACCTGTAGA  250

seq1  GTCAACAGTAAGAATGGCTTTTACATTTTGGAATAAGTTGAACATTTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACAGTAAGAATGGCTTTTACATTTTGGAATAAGTTGAACATTTGGA  300

seq1  AGACTCATGAAGAACGGGGCTAACTTTTTGTGCTAACAAAGTTTTATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCATGAAGAACGGGGCTAACTTTTTGTGCTAACAAAGTTTTATGAA  350

seq1  GGCATAGCCAGGCACGTTGATTCAGATTATGTCAGTGGAGTTTGGTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGCCAGGCACGTTGATTCAGATTATGTCAGTGGAGTTTGGTGAGG  400

seq1  GACTCATTGATGTAGGGCTAGCACAGACTGTAAGATATTCTGACTGACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCATTGATGTAGGGCTAGCACAGACTGTAAGATATTCTGACTGACTG  450

seq1  TTCACAGAAAAGGTTTGGTGATGCTGCCCTAAAAGGCCTTCCCATGGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGAAAAGGTTTGGTGATGCTGCCCTAAAAGGCCTTCCCATGGAAG  500

seq1  CGAAGCAAATGCCTGTGCTACACTGTCCTCCCTTCCTCTTGGCTTCACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGCAAATGCCTGTGCTACACTGTCCTCCCTTCCTCTTGGCTTCACTG  550

seq1  TTCCAGTTCCCCAGGCTTGGGAAGGAAAGCTTAGCTGAAGGCTGGCAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTTCCCCAGGCTTGGGAAGGAAAGCTTAGCTGAAGGCTGGCAGCC  600

seq1  GAGTAAGACGGCAAGAAGAGAAGGGCACGGGGACCAGACGGTGAGGGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGACGGCAAGAAGAGAAGGGCACGGGGACCAGACGGTGAGGGTCT  650

seq1  TCTTTAGATATTGAGTCTTTACGTTGACGCTGGACCTTCTAGGCTCACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGATATTGAGTCTTTACGTTGACGCTGGACCTTCTAGGCTCACAA  700

seq1  CCTATTTTTTTCTCTTGCTGGGGTTTCAACTTCTTTGCCTTTGGGGGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTTTTTCTCTTGCTGGGGTTTCAACTTCTTTGCCTTTGGGGGGAA  750

seq1  AAATCCTATACTCACTCACTAGATCATTATGATAAATATGTGAAATCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTATACTCACTCACTAGATCATTATGATAAATATGTGAAATCTTA  800

seq1  TCACTATCTCCTCTCTTACTGTCAGTCCCAAGTCAACCCAAGATCTAA-G  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCACTATCTCCTCTCTTACTGTCAGTCCCAAGTCAACCCAAGATCTAAGG  850

seq1  GGGGGGGGGGGAAGAATTT  868
      |||||||||||||||||||
seq2  GGGGGGGGGGGAAGAATTT  869

seq1: chr16_57525567_57526695
seq2: B6Ng01-264O10.g_67_1188 (reverse)

seq1  AAATTCCATGGATTTTGGATAGCTAAGACTATTTAATACTATAAAGAGCA  50
      |||||||||||||||  ||||||  |||||| | | ||||||||||||||
seq2  AAATTCCATGGATTT--GATAGCCTAGACTA-TGATTACTATAAAGAGCA  47

seq1  ATTAACGTAAGCTGATCCGAAACTGAAGCCTTTAACTATTAAATAATCAG  100
      ||  |||| |||||||| ||||||| |||| |||||||||||||||||||
seq2  AT--ACGT-AGCTGATCGGAAACTG-AGCC-TTAACTATTAAATAATCAG  92

seq1  CCC-TTTTCTTAATTAAAATCTCAGCTCTCAAT-AGACTTCTTGCCTAAA  148
      ||| ||||||||| ||||||||||||||||||| |||||||| |||||||
seq2  CCCTTTTTCTTAA-TAAAATCTCAGCTCTCAATAAGACTTCTGGCCTAAA  141

seq1  GAAGTAAAATTTCTCATTCAC-TCTTGTTGGATGACGACAGCTCTTGTTG  197
      ||||||||||||||||||||| |||||||||||||||||||||| |||||
seq2  GAAGTAAAATTTCTCATTCACTTCTTGTTGGATGACGACAGCTC-TGTTG  190

seq1  ACAATGATAAATGAACTCTGAGTCTGAAGGGCTCACTCTAGTGAAAGAAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGATAAATGAACTCTGAGTCTGAAGGGCTCACTCTAGTGAAAGAAC  240

seq1  AGGAAAAGGGTTGCAGACCAAGACTCTCAGCACCTACTTTGCAGGCAACC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGGGTTGCAGACCAAGACTCTCAGCACCTACTTTGCAGGCAACC  290

seq1  TGAGAATCCAATGGGCAGCTGAATGCAAATGCAATAAAAATGTGGTAAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATCCAATGGGCAGCTGAATGCAAATGCAATAAAAATGTGGTAAAA  340

seq1  ATACGCAGCAAAGTCATCTAAGTGTACTGACCTGATAGCAACTGTAGACC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGCAGCAAAGTCATCTAAGTGTACTGACCTGATAGCAACTGTAGACC  390

seq1  CTAAGAGCTGACTGAAGTGTGCAGCCTGGGTTGTGTGTGTGTGTGTGTGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGCTGACTGAAGTGTGCAGCCTGGGTTGTGTGTGTGTGTGTGTGT  440

seq1  GTGTGTGTGCTCGCGCGTGTGTGCTTTTTAACCTATCAGAAGAATGACAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGCTCGCGCGTGTGTGCTTTTTAACCTATCAGAAGAATGACAA  490

seq1  GATGGATCAAATGTTAATTTTTTTCTTTTAACAGCCCACTGCTAGCCATA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATCAAATGTTAATTTTTTTCTTTTAACAGCCCACTGCTAGCCATA  540

seq1  TTATTGCTTTTTGTACAAAGGAAACTCTTCCCATTAAACCCACTGTCCTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCTTTTTGTACAAAGGAAACTCTTCCCATTAAACCCACTGTCCTC  590

seq1  TTCTCTCTTGCCATTAGGAACGGCTGCTTCACCTAAAACAAATGCTGCCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTTGCCATTAGGAACGGCTGCTTCACCTAAAACAAATGCTGCCC  640

seq1  CAGCTGTGAGTTCACATTTCTGCTCCAAAGTGATTTTTCATCATATTGTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTGAGTTCACATTTCTGCTCCAAAGTGATTTTTCATCATATTGTT  690

seq1  ACCCTTGGGAGATAGTGCCTAACACATAATTAGGATACAACTGAGTGGTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTGGGAGATAGTGCCTAACACATAATTAGGATACAACTGAGTGGTT  740

seq1  CTAAAGCTGTTTGATGCCCCACTTCTTCCTGCTAAAAGGTTCCGAATCAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCTGTTTGATGCCCCACTTCTTCCTGCTAAAAGGTTCCGAATCAG  790

seq1  ACATCCATGGTGTCCACAACCCTGTGCGTGTTCACTTTCACGTGTACACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCATGGTGTCCACAACCCTGTGCGTGTTCACTTTCACGTGTACACA  840

seq1  CACAGATATAAAAAGTAAGTGTATTTTGGAGGTTCCACACCACACCCAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATATAAAAAGTAAGTGTATTTTGGAGGTTCCACACCACACCCAAA  890

seq1  CTTAGCTCTAAGCCCTTTCTCTTTTCATTCTGTGCTTGATGCTGAGTCAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTCTAAGCCCTTTCTCTTTTCATTCTGTGCTTGATGCTGAGTCAG  940

seq1  ATAAGGAAGGGACTCACGAGAAGATGCTGAAGGGTCCCAAAAGTTGTTCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGAAGGGACTCACGAGAAGATGCTGAAGGGTCCCAAAAGTTGTTCT  990

seq1  GCATTCTTTTCACCTCTGTTTACACCTATGTTCCCAAACTAGGCCACTTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTTTTCACCTCTGTTTACACCTATGTTCCCAAACTAGGCCACTTT  1040

seq1  AACCATCCCCTTGTTTCAGAAATGTCCCCATTAGAGCACTGGCTTTCTAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCCCCTTGTTTCAGAAATGTCCCCATTAGAGCACTGGCTTTCTAA  1090

seq1  ATTCGGCAACAGTTAGAGAACTTAGAGAATTC  1129
      ||||||||||||||||||||||||||||||||
seq2  ATTCGGCAACAGTTAGAGAACTTAGAGAATTC  1122