BAC Information

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BAC

Clone NameB6Ng01-265E17
Chromosome16 (Build37)
Map Location 70,025,999 - 70,027,186
singlet/doubletsinglet
Overlap genenone
Upstream geneSpeer2
Downstream geneEG664930, Gbe1, D16Ertd519e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265E17.bB6Ng01-265E17.g
ACCGA068982GA068983
length8911,188
definitionB6Ng01-265E17.b B6Ng01-265E17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttagaattgtatcccctttgacctccttttgttgtctcattact
ctaactagaacttggagtactatattcaatagggtgggccttgtcttgtc
actgattataatgggattgcattgagcttctctccatttagtttgatgtt
gtctctcagtttgctgtatgttccttttcttatatatagggttgaagttt
gagttcctgatctctctagtacttttaacatgaacgggtgctgtattttg
ttaaatgctttttcagcatgtaatgaaatggtcatgtgtttttttttttt
ttgagtttgtttatatgtttgtttatatagtggattacattgatggattt
ccatatattgaacaatccctgcattcctggatgaagcctacttgatcatg
gtgattgatagttttgatgtgttcttggatttggcttgcaagaattttat
tgagtatatttgcattgatattcgtttgggaaattggtctgaaattctct
ttctttgttgggtcttttgatggtttaggtatcagtataactgtagcctc
atagaaagaattgagtggtttttccttctgtttctgtgttatgaaagagc
ttgagatgtattagtattagatcttctttgaaggtctgaaaccacctggt
ccttgacatttttggttgggagacttctagtgactgcttctatttccttg
gcggttatggggtggtttagatggtttatctcatcctgattttaacttta
ttacctgggtatctgtccagaaaaaattcattccatttctttcaaatttc
cagttttgttggaatatattcttattgcaaaggatctgaattatttcttt
tttgatttttctcagatattgttagatattcactcatattc

gaattctccctccttttgtgtatgtttctgtctttctttcatcatcttaa
taaagactgacattcaaacatacttctgtatatgcttgaatatcaataaa
atgtgaagaagcattggaaatgaatatatatatattgtaaccagaaaatg
taaatcagaaatcttgaaccatttatttgagtcatttcatagagaagata
tcttttcttcagtgaatttgatgaggcttgtagctaagtataaattcata
aggttcttcatgttgttttagtaaaagtctaagagaatagcaaaaaaaaa
aacatgtgaaaatgaaattataaaaactagaaactttaccccgtgtaaag
ttatattgaagaccgattttaaaaaataaaaccaggaatcatttgacctg
attgcttatcaaactattgagaaggtgtactgtcttcacttagcttacca
tatcatttctatttcacagtcagagtaaagatctttgagtatacagcatc
aataaagggtgatacctatgtgtaatattttgataggctctaagagcatc
agagtcaaacagcctgagcatgaattcaagataacccatagacagggcta
caggtttctataattggaggtcttatctgggtcaaaagaatgtatgttgc
ctttatcttatatcacttaagctggatgcatgatttccagaaagatagtg
ctgacggaagcaggttcaccctatgctacatgataggacacatttctcct
aaaagtgtctttgtctctttgacatgtgataataatgaaatcataaatgt
tttcctttggtagaggctaaagaacagtcttgaaaattgatttaagatgt
ttttataccaatactgtacaaagcagatcccataaattaatagaaggaga
atttaaagtcatgtcttacacacatacacaattatttttaaagtgtgagc
gcccgactcgccagcaagaacgacgccacaataggatccttctgcaacac
gtttattggggagagcattgactgcaatagcgaaagaccctgagcccaga
aatgctgctgcttatatatgccttagaagtgacatgttcataccttgatt
gctttgcctacagtaacttcataaatagcgttggtccagcatgactcagc
aaaactcttatgccatgcgcacacttgattgtttaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_70025999_70027186
seq2: B6Ng01-265E17.g_67_1254 (reverse)

seq1  GGGTAAACAACCAA-TGTGCGCATGTGCATAAGAGTTTTTTGCTGAGTCA  49
      |||||||||| ||| |||||||||| |||||||||  |||||||||||||
seq2  GGGTAAACAATCAAGTGTGCGCATG-GCATAAGAG--TTTTGCTGAGTCA  47

seq1  CTGCCTGGCCCAACGCATATTAATG-AGGTACTGGTAGCAAAACCAATC-  97
       || |||| ||||||| |||| ||| || |||| ||||  ||| ||||| 
seq2  -TG-CTGGACCAACGC-TATTTATGAAGTTACT-GTAGGCAAAGCAATCA  93

seq1  AGGTATGGACATGTCACTTCT-AGGCATATATAAGCAGCACCATTTCTGG  146
      ||||||| ||||||||||||| |||||||||||||||||| |||||||||
seq2  AGGTATGAACATGTCACTTCTAAGGCATATATAAGCAGCAGCATTTCTGG  143

seq1  GCTCAGGGTCTTTCGCCTATGCAGTCAATGCTCT-CCCAATAAACGTG-T  194
      ||||||||||||||||   ||||||||||||||| ||||||||||||| |
seq2  GCTCAGGGTCTTTCGCTATTGCAGTCAATGCTCTCCCCAATAAACGTGTT  193

seq1  GCAGAAGGATCCTATTGTGGCGTCGTTCTTGCTGGCGAGTCGGGCGCTCA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGGATCCTATTGTGGCGTCGTTCTTGCTGGCGAGTCGGGCGCTCA  243

seq1  CACTTTAAAAATAATTGTGTATGTGTGTAAGACATGACTTT-AATTCTCC  293
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CACTTTAAAAATAATTGTGTATGTGTGTAAGACATGACTTTAAATTCTCC  293

seq1  TTCTATTAATTTATGGGATCTGCTTTGTACAGTATTGGTATAAAAACATC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTAATTTATGGGATCTGCTTTGTACAGTATTGGTATAAAAACATC  343

seq1  TTAAATCAATTTTCAAGACTGTTCTTTAGCCTCTACCAAAGGAAAACATT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCAATTTTCAAGACTGTTCTTTAGCCTCTACCAAAGGAAAACATT  393

seq1  TATGATTTCATTATTATCACATGTCAAAGAGACAAAGACACTTTTAGGAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTTCATTATTATCACATGTCAAAGAGACAAAGACACTTTTAGGAG  443

seq1  AAATGTGTCCTATCATGTAGCATAGGGTGAACCTGCTTCCGTCAGCACTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTCCTATCATGTAGCATAGGGTGAACCTGCTTCCGTCAGCACTA  493

seq1  TCTTTCTGGAAATCATGCATCCAGCTTAAGTGATATAAGATAAAGGCAAC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGGAAATCATGCATCCAGCTTAAGTGATATAAGATAAAGGCAAC  543

seq1  ATACATTCTTTTGACCCAGATAAGACCTCCAATTATAGAAACCTGTAGCC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTCTTTTGACCCAGATAAGACCTCCAATTATAGAAACCTGTAGCC  593

seq1  CTGTCTATGGGTTATCTTGAATTCATGCTCAGGCTGTTTGACTCTGATGC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTATGGGTTATCTTGAATTCATGCTCAGGCTGTTTGACTCTGATGC  643

seq1  TCTTAGAGCCTATCAAAATATTACACATAGGTATCACCCTTTATTGATGC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAGCCTATCAAAATATTACACATAGGTATCACCCTTTATTGATGC  693

seq1  TGTATACTCAAAGATCTTTACTCTGACTGTGAAATAGAAATGATATGGTA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACTCAAAGATCTTTACTCTGACTGTGAAATAGAAATGATATGGTA  743

seq1  AGCTAAGTGAAGACAGTACACCTTCTCAATAGTTTGATAAGCAATCAGGT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGTGAAGACAGTACACCTTCTCAATAGTTTGATAAGCAATCAGGT  793

seq1  CAAATGATTCCTGGTTTTATTTTTTAAAATCGGTCTTCAATATAACTTTA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGATTCCTGGTTTTATTTTTTAAAATCGGTCTTCAATATAACTTTA  843

seq1  CACGGGGTAAAGTTTCTAGTTTTTATAATTTCATTTTCACATGTTTTTTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGGGTAAAGTTTCTAGTTTTTATAATTTCATTTTCACATGTTTTTTT  893

seq1  TTTTGCTATTCTCTTAGACTTTTACTAAAACAACATGAAGAACCTTATGA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTATTCTCTTAGACTTTTACTAAAACAACATGAAGAACCTTATGA  943

seq1  ATTTATACTTAGCTACAAGCCTCATCAAATTCACTGAAGAAAAGATATCT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATACTTAGCTACAAGCCTCATCAAATTCACTGAAGAAAAGATATCT  993

seq1  TCTCTATGAAATGACTCAAATAAATGGTTCAAGATTTCTGATTTACATTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATGAAATGACTCAAATAAATGGTTCAAGATTTCTGATTTACATTT  1043

seq1  TCTGGTTACAATATATATATATTCATTTCCAATGCTTCTTCACATTTTAT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTACAATATATATATATTCATTTCCAATGCTTCTTCACATTTTAT  1093

seq1  TGATATTCAAGCATATACAGAAGTATGTTTGAATGTCAGTCTTTATTAAG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTCAAGCATATACAGAAGTATGTTTGAATGTCAGTCTTTATTAAG  1143

seq1  ATGATGAAAGAAAGACAGAAACATACACAAAAGGAGGGAGAATTC  1188
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAAAGAAAGACAGAAACATACACAAAAGGAGGGAGAATTC  1188


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