BAC Information

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BAC

Clone NameB6Ng01-265F08
Chromosome16 (Build37)
Map Location 58,156,751 - 58,157,617
singlet/doubletsinglet
Overlap geneLOC100043477
Upstream geneNit2, Tbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480, LOC629342
Downstream geneDcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265F08.bB6Ng01-265F08.g
ACCGA069012GA069013
length1,1931,094
definitionB6Ng01-265F08.b B6Ng01-265F08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
accatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtttgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgtctctataccagtaccatgcagtttttaccacaattg
atctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttgctatcctaggttttttgttattccagat
gaatttgcaaattgctccttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttcttcagagatttgaagtttttatcat
acagatctttcacttcccttagttagagtcactccgagatattttatatt
attgtgactattgagaagggtgttgtttccctaatttctttctcagcctg
tttatctttgtgtagagaatgcattgacttgttgagttaattttaatatt
cagctacttcaccgaagctgtttatcaagttaggagttctctgtgattta
aggttaacttattatactatcaattcatctgcaaagtgatatgactcctc
tttcaattggaatccccttggatctcccttttgtgtacgaatg
gaattcacagaggtaaaacatttacacatgacttccacatgctcaagtct
gataaaacaagaacatgaagagaggaaggggatgtgaaatcccaccccta
tcttaggagctattgacaattaatggctactcagagcaggagagtcagtt
tttgataggggtgtgacccctggtatgtggaccacactctagtagatagc
gacttacccaagcgtagataggcagtactaattggacttgaaagttaaaa
aggaagagctggtgaaatggctcagcagttaagagcactgactgctcttc
tgaaggtcctgagttcaaattctagcaaccacatgatggctcacagtcat
ccgtaatgagatctgccactctcttctagtgtgtctgaaaacagctataa
tgtacttacatataataataaataagtctttttaaaaaaaaagttgctgg
gcagtggtggcacatacctttaatcctagcacttggaaggcaaaggcagg
cagatttctgagttcaaggccagcctggtctacagagtgagttccaggac
agccagggctacacagagaaaccctgtctcgaaaaaaaaaaaaaaaagtt
aaaaaaggaaaaaaaaaaggaatgggagattggataaggagagagtttca
gagaggagaattaatatcatcaaaatttattaattgaaatatcaaagaaa
caatagaataatttattttaaaaaaaaaagattataaagccaatggaaaa
actccacgattccaggtattcactattactgaaaccaggtctaagtgtac
aatagatcctgaccttagcagatgttttcttctttgttaactctgattgt
ttgggtagagcccagggaaaagacttcgagagtacaaggatgggaggaaa
gagcacacataggtttgttgctgcctagaggacacctaggagctcagtca
gagagacagaggaatgtggctggactggcccagctcatgcttcacccagt
ccaagtgcatttatacaaggtgctcacttatctcttttagttttagctgg
agacactttgtattatcaagctggagaataaaatatttgctcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58156751_58157617
seq2: B6Ng01-265F08.g_308_1160

seq1  AAGTTAAAAAGGAAGAGCTGGTGAAATGGCTCAGCAGTTAAGAGCACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAAAAGGAAGAGCTGGTGAAATGGCTCAGCAGTTAAGAGCACTGA  50

seq1  CTGCTCTTCTGAAGGTCCTGAGTTCAAATTCTAGCAACCACATGATGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTTCTGAAGGTCCTGAGTTCAAATTCTAGCAACCACATGATGGCT  100

seq1  CACAGTCATCCGTAATGAGATCTGCCACTCTCTTCTAGTGTGTCTGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCATCCGTAATGAGATCTGCCACTCTCTTCTAGTGTGTCTGAAAA  150

seq1  CAGCTATAATGTACTTACATATAATAATAAATAAGTCTTTTTAAAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTATAATGTACTTACATATAATAATAAATAAGTCTTTTTAAAAAAAA  200

seq1  AGTTGCTGGGCAGTGGTGGCACATACCTTTAATCCTAGCACTTGGAAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTGGGCAGTGGTGGCACATACCTTTAATCCTAGCACTTGGAAGGC  250

seq1  AAAGGCAGGCAGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAGGCAGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAG  300

seq1  TTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAAAAAAA  350

seq1  AAAAAAGTTAAAAAAGGAAAAAAAAAAGGAATGGGAGATTGGATAAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTTAAAAAAGGAAAAAAAAAAGGAATGGGAGATTGGATAAGGAG  400

seq1  AGAGTTTCAGAGAGGAGAATTAATATCATCAAAATTTATTAATTGAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTCAGAGAGGAGAATTAATATCATCAAAATTTATTAATTGAAATA  450

seq1  TCAAAGAAACAATAGAATAATTTATTTTAAAAAAAAAAGATTATAAAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAACAATAGAATAATTTATTTTAAAAAAAAAAGATTATAAAGCC  500

seq1  AATGGAAAAACTCCACGATTCCAGGTATTCACTATTACTGAAACCAGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAAAACTCCACGATTCCAGGTATTCACTATTACTGAAACCAGGTC  550

seq1  TAAGTGTACAATAGATCCTGACCTTAGCAGATGTTTTCTTCTTTGTTAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTACAATAGATCCTGACCTTAGCAGATGTTTTCTTCTTTGTTAAC  600

seq1  TCTGATTGTTTGGGTAGAGCCCAGGGAAAAGACTTCGAGAGTACAAGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTGTTTGGGTAGAGCCCAGGGAAAAGACTTCGAGAGTACAAGGAT  650

seq1  GGGAGGAAAGAGCACACATAGGTTTGTTGCTGCCTAGAGGACAACCTAGG  700
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGGAGGAAAGAGCACACATAGGTTTGTTGCTGCCTAGAGGAC-ACCTAGG  699

seq1  AGCTCAGTCAGGAGAGACAGAGGAATGTGGCTGGACTGGCCCAGCTCATG  750
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGTCA-GAGAGACAGAGGAATGTGGCTGGACTGGCCCAGCTCATG  748

seq1  CCTTCACCCAGTCCAAGTGCAATTTTATACAAAGTGCCTCAACTTATCTC  800
       ||||||||||||||||||||  ||||||||| ||| ||| |||||||||
seq2  -CTTCACCCAGTCCAAGTGCA--TTTATACAAGGTG-CTC-ACTTATCTC  793

seq1  TTTTTAGTTTTTAAGGCTGAGAACAACTTTGTATTATCCAAGCTTGAGAA  850
       ||||||||||    |||| ||   |||||||||||| |||||| |||||
seq2  -TTTTAGTTTT---AGCTG-GAGACACTTTGTATTAT-CAAGCTGGAGAA  837

seq1  TAAAATATTTTGCTCAT  867
      ||||||| |||||||||
seq2  TAAAATA-TTTGCTCAT  853