BAC Information

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BAC

Clone NameB6Ng01-265G05
Chromosome16 (Build37)
Map Location 25,005,931 - 25,006,643
singlet/doubletsinglet
Overlap genenone
Upstream geneEG433009, LOC666580, LOC100043564, 1110054M08Rik, Lpp, A730098P11Rik
Downstream gene5430420C16Rik, Trp63, LOC100043571, Leprel1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265G05.bB6Ng01-265G05.g
ACCGA069054GA069055
length1,2061,069
definitionB6Ng01-265G05.b B6Ng01-265G05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgaaaatgaaggcacaacatacccaaatttatgggacaccat
gaaagtagtgctaagaggaaagttcatggaactaagtaactccataaaga
aattagaaaagttctcatacaagcaatttaaaagtacacctaaaatcact
agggaaaaaaaaaaacagataaaccaaagaggagtagaatgcaggaaata
atccaaatcaggactgaagcaaccaattagacccaaagaaaatttaaaga
atcaataaaactaagaggtggttctttaagaaaatcaacaagatagacaa
acacttagccaaactaaccaaaagacagaggggcaatatccaaattaact
aaatcagaaatgaaaaggaagacataatataaacaacaagaaatttgaag
aatcattaggtcttacttcaaatgtgtggatgatttcctaggcagatacc
acttactaaagttaaatcaagatcaggtgaactatttaaacagccctata
acccctaaggaaatagaagcagtcattaaaagtctcccaaccagtcctgg
aaggatggttcagtggttaagaccaccagcttcctcttccaaagatcctg
agttcaaatcccagcacccacatggtggctcacaaccatctgtaacgaga
tctgactccctcttttggagtgtctgaagatagctacagtgcacttacat
ataataaataagtaaatcttaaaaaataaaataaaaaatctcccaagcaa
aacccagggccagatggttttcaggcagattgctaccagacatttaaaga
agagctaacaccaatattcctccaactagtccataaagtcaccctgatac
ctaaaccacacaaagactcaacaaagaaagagaatttctagactaatctc
ccttatgaacattgatgcaaaaaatacccaataaaatactcacaaaacga
atcaagaacccatcaaaatatcatccactatgatcaaatagaggtggggg
acatctgagacatgccagagatctgggatagggagactcaagaacatggg
gagtgatgttagctgaacacatagcatgcagttatgacttgagagcacct
ctatagcagtcaggaaccagtggaatgaaggactctatccacctacaaac
ttgactaatactgcctcagaaatgcgaatgtcatgttagaaggagaaact
cggatc
gaattcatccaagagataggaactgaggaagtctcaagctgaaatgaaga
tgcatttggaaaactcaatagcccaactagaaaacttgaagccttttagg
aagaatggatcaagtagaaggcaaattatcaggttaaaagataaaatagt
gtagctgagatctcacaaatggttctcaacctgtgggccatgaccccttt
gggagttgaatgtgcacagtgggtacatatcatatatttacttacattac
aatttataacagtagcaaaattacagttatgaagtaacatgaaaaataat
tttatggttgaggtcaccacaacagaagaaacatcactaggaagggttag
aaccactgatctataccaaataagcaaggaacaaaaaaataaataaataa
aacaaagaaacacataaacaaaaaataaacacaggaaagaaagactgaag
aaatgtggagcaccattaaaaaaaaatacccttcaaattgtaggcatata
tgaaagaaaagaatcctgagttaatggcatagaccagattttcaacaaga
tcatagaagaaaacttccccaaactaaggaaagacatacctacacaaata
tacaaaacacagagcacaagatagataccaccagaaaagaaaatgcccat
gaaatattataattaaaatactaagtatatataaaaaagaaagagtattg
aaaattcaagccacatgtaaaagaaaacctatcagaataacatcttgctc
ctcaatggaaattttgaaagccagaagaagtaagtcccaaaagagtatga
gggtcaacatagactaatatacccagaaaaactattccctataattgaag
aagaaggaaatttaccacagtataatcagacatatctatctgctacctac
aatagcacatcttatatttaaagaaaggcaccacctttagaataaatgtt
agacaaaaaaaattgcaatcaaatggggaccataagtttcaccaacataa
ctgtcaaactgagtgtcaggtgagctacaagcttcaccctacacagagac
tatagcaactgaggagctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_25005931_25006643
seq2: B6Ng01-265G05.g_429_1134

seq1  TACCAAATAAGCAAGGAACAAAAAAATAAATAAATAAAACAAAGAAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAATAAGCAAGGAACAAAAAAATAAATAAATAAAACAAAGAAACAC  50

seq1  ATAAACAAAAAATAAACACAGGAAAGAAAGACTGAAGAAATGTGGAGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAAAAAATAAACACAGGAAAGAAAGACTGAAGAAATGTGGAGCAC  100

seq1  CATTAAAAAAAAATACCCTTCAAATTGTAGGCATATATGAAAGAAAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAAAAAAATACCCTTCAAATTGTAGGCATATATGAAAGAAAAGAA  150

seq1  TCCTGAGTTAATGGCATAGACCAGATTTTCAACAAGATCATAGAAGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGTTAATGGCATAGACCAGATTTTCAACAAGATCATAGAAGAAAA  200

seq1  CTTCCCCAAACTAAGGAAAGACATACCTACACAAATATACAAAACACAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCAAACTAAGGAAAGACATACCTACACAAATATACAAAACACAGA  250

seq1  GCACAAGATAGATACCACCAGAAAAGAAAATGCCCATGAAATATTATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAGATAGATACCACCAGAAAAGAAAATGCCCATGAAATATTATAAT  300

seq1  TAAAATACTAAGTATATATAAAAAAGAAAGAGTATTGAAAATTCAAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATACTAAGTATATATAAAAAAGAAAGAGTATTGAAAATTCAAGCCA  350

seq1  CATGTAAAAGAAAACCTATCAGAATAACATCTTGCTCCTCAATGGAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAAAAGAAAACCTATCAGAATAACATCTTGCTCCTCAATGGAAATT  400

seq1  TTGAAAGCCAGAAGAAGTAAGTCCCAAAAGAGTATGAGGGTCAACATAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGCCAGAAGAAGTAAGTCCCAAAAGAGTATGAGGGTCAACATAGA  450

seq1  CTAATATACCCAGAAAAACTATTCCCTATAATTGAAGAAGAAGGAAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATACCCAGAAAAACTATTCCCTATAATTGAAGAAGAAGGAAATTT  500

seq1  ACCACAGTATAATCAGACATATCTATCTGCTACCTACAATAGCACATCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGTATAATCAGACATATCTATCTGCTACCTACAATAGCACATCTT  550

seq1  ATATTTAAAGAAAGGCACCACC-TTAGAATAAATGTTAGAC-AAAAAAAT  598
      |||||||||||||||||||||| |||||||||||||||||| ||||||||
seq2  ATATTTAAAGAAAGGCACCACCTTTAGAATAAATGTTAGACAAAAAAAAT  600

seq1  TGCAATCAAATGGGGACCATAAGGTTTCACCAACATAACTGTCAAAACTG  648
      |||||||||||||||||||||| |||||||||||||||||||| ||||||
seq2  TGCAATCAAATGGGGACCATAA-GTTTCACCAACATAACTGTC-AAACTG  648

seq1  AGTGTCAGGGTGAGCCTACAAGGCTTCAACCCTACACAGAGAACTATAAG  698
      ||||||| |||||| |||||| ||||| ||||||||||||| ||||| ||
seq2  AGTGTCA-GGTGAG-CTACAA-GCTTC-ACCCTACACAGAG-ACTAT-AG  692

seq1  CAACTGAGGAAGCTG  713
      ||||||||| |||||
seq2  CAACTGAGG-AGCTG  706