BAC Information

Click to search

BAC

Clone NameB6Ng01-265I01
Chromosome16 (Build37)
Map Location 32,494,174 - 32,618,002
singlet/doubletdoublet
Overlap geneZdhhc19, LOC385820, Tfrc
Upstream geneGm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta
Downstream geneTnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791, Osbpl11, Snx4, Zfp148, Slc12a8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265I01.bB6Ng01-265I01.g
ACCGA069135GA069136
length1,1401,131
definitionB6Ng01-265I01.b B6Ng01-265I01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,494,174 - 32,495,310)(32,616,860 - 32,618,002)
sequence
gaattctcacactccaacacacctctgtgcattcccctctcactcataca
cacactcttcacatactcatcacacataccacatgcagtctcctctcact
cacatacacacagacacacacacacactctttctcctcacactctctcca
cttacctcacacacacacctcatgtgcacctcactagctctccacttgct
ctcttgcctttctcttgcctgagtcttttattgatactccaaaagcaggt
aggaaaaaaaaaagacattgtacaatcattgccaaatcaaattcaaaaga
ataaccacgtcccacaagaattacaattgttccccaaagtttcaagtttc
ccctattcgcaggcctgtggccaaaataataataattgcaaacttatcgt
tatttaaactttaacttttgacttactatacttcagagctcagagccctg
aggtcagctacttgcattttcttgtgaagctctaatgataaacgacatgg
gcaaagctgccaggcagtggccagaagagtcaggttaacccttagctcag
tagtttcgctagttttctgcttctgcacattgcacacaatgaccctccca
agagtcccggtgttttgccttagttttcctagtatataattttatgtatt
ctatacttgcttatccaggaaccacccttaaatgttgtacaaaacttatt
tcacaattgcaataattttttcctttctcggggtcccaatgttggctcta
tttcattttctaataatttcttcaaactttctttgcaagtcaagcattaa
tctgaaactaccattgtgcagttattgcattgtttccaagatgagaacac
acagcatacacctgggccattaggactgtgctgtgctgtgccccatgcct
caatttttgattgtttaagaatcattacatcacgcaacatctagtttcac
agaattcaccagagcagaaggagaaagaagtaagaaagtcagatataata
tatactttgcaccaccaaggcaactgaaaagcagtcaccccacaagtgaa
attctaatcagctgttgcccagggctaagttagaaagaaatagaaacact
gtttgttacaaaagagctgccctcagcttactggagatgt
gaattctacatctcattctgcttttacattgcctcaactatatctaggga
aaggataaacaaacagatcaggcatgtaagcacttattccatatttccac
atctgaatctaaagcatctgaaaacacagaaactgtgattgtgtgtacat
gtggcttatacagaggtcaaaaaacaacctatgtatctcaggtgctgtgt
tgtttgtcaacttgacagaatccagagtcattagaaagaaacttaaattg
agggaatgtcccttgttggcatggctgtagggcattctcttgatctgtga
ctaataaggagactttcagatgggagcatactcatgcttaagagcaactg
caacaggagtggtcttgaataaggagagcaacaagatttagggcaggagg
ttctcaacctgtggatctctgactctttgggtctgaacccttttcatagg
ggacccttggaaagcagaatttacagcaagacattaaatagcaacaaagg
taatttcatggttagagatcaccacagtgacaaactatattaaaggggag
attgagaaccaactgatttagggtcttacaaaacaaaatgggaccttaaa
attcatccaaaggtaataaaggtccaagaacaataatctcataaccagta
atttataccgggatatctaatttccttcgtgagacactggaaagtcaatt
tcactatttttacttacagaaacttctgtaggtttactgaatgccacata
accctcgggagactccactgggtctaagttaccatttgactgcactatgg
tcaccatgttttgaccaatgctaaaagataaaaaataaagttaaagccgt
ccttaaaagaaaaatccaagttagtatacatagcatttgacttgcattga
ttagcttaggaaaagtaatctctaaatttttaccttgattttcattttgc
aagtttcatctactgaccatctcaagcagttacctctataaaatgagcta
ctactattacaacatacctgcttttcactgatcttcacatagtgtcatct
cgccagacttgctgattaaatcatggaactgatttcaatataatagccag
actttcactttcgagatccagcctcacgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32494174_32495310
seq2: B6Ng01-265I01.b_46_1185

seq1  GAATTCTCACACTCCAACACACCTCTGTGCATTCCCCTCTCACTCATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACACTCCAACACACCTCTGTGCATTCCCCTCTCACTCATACA  50

seq1  CACACTCTTCACATACTCATCACACATACCACATGCAGTCTCCTCTCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCTTCACATACTCATCACACATACCACATGCAGTCTCCTCTCACT  100

seq1  CACATACACACAGACACACACACACACTCTTTCTCCTCACACTCTCTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACACACAGACACACACACACACTCTTTCTCCTCACACTCTCTCCA  150

seq1  CTTACCTCACACACACACCTCATGTGCACCTCACTAGCTCTCCACTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTCACACACACACCTCATGTGCACCTCACTAGCTCTCCACTTGCT  200

seq1  CTCTTGCCTTTCTCTTGCCTGAGTCTTTTATTGATACTCCAAAAGCAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCCTTTCTCTTGCCTGAGTCTTTTATTGATACTCCAAAAGCAGGT  250

seq1  AGGAAAAAAAAAAGACATTGTACAATCATTGCCAAATCAAATTCAAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAAAAAAGACATTGTACAATCATTGCCAAATCAAATTCAAAAGA  300

seq1  ATAACCACGTCCCACAAGAATTACAATTGTTCCCCAAAGTTTCAAGTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCACGTCCCACAAGAATTACAATTGTTCCCCAAAGTTTCAAGTTTC  350

seq1  CCCTATTCGCAGGCCTGTGGCCAAAATAATAATAATTGCAAACTTATCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATTCGCAGGCCTGTGGCCAAAATAATAATAATTGCAAACTTATCGT  400

seq1  TATTTAAACTTTAACTTTTGACTTACTATACTTCAGAGCTCAGAGCCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAACTTTAACTTTTGACTTACTATACTTCAGAGCTCAGAGCCCTG  450

seq1  AGGTCAGCTACTTGCATTTTCTTGTGAAGCTCTAATGATAAACGACATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGCTACTTGCATTTTCTTGTGAAGCTCTAATGATAAACGACATGG  500

seq1  GCAAAGCTGCCAGGCAGTGGCCAGAAGAGTCAGGTTAACCCTTAGCTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCTGCCAGGCAGTGGCCAGAAGAGTCAGGTTAACCCTTAGCTCAG  550

seq1  TAGTTTCGCTAGTTTTCTGCTTCTGCACATTGCACACAATGACCCTCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCGCTAGTTTTCTGCTTCTGCACATTGCACACAATGACCCTCCCA  600

seq1  AGAGTCCCGGTGTTTTGCCTTAGTTTTCCTAGTATATAATTTTATGTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCCGGTGTTTTGCCTTAGTTTTCCTAGTATATAATTTTATGTATT  650

seq1  CTATACTTGCTTATCCAGGAACCACCCTTAAATGTTGTACAAAACTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACTTGCTTATCCAGGAACCACCCTTAAATGTTGTACAAAACTTATT  700

seq1  TCACAATTGCAATAATTTTTTCCTTTCTCGGGGTCCCAATGTTGGCTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATTGCAATAATTTTTTCCTTTCTCGGGGTCCCAATGTTGGCTCTA  750

seq1  TTTCATTTTCTAATAATTTCTTCAAACTTTCTTTGCAAGTCAAGCATTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTTCTAATAATTTCTTCAAACTTTCTTTGCAAGTCAAGCATTAA  800

seq1  TCTGAAACTACCATTGTGCAGTTATTGCATTGTTTCCAAGATGAGAACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAACTACCATTGTGCAGTTATTGCATTGTTTCCAAGATGAGAACAC  850

seq1  ACAGCATACACCTGGGCCATTAGGACTGTGCTGTGCTGTGCCCCATGCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATACACCTGGGCCATTAGGACTGTGCTGTGCTGTGCCCCATGCCT  900

seq1  CAATTTTTGATTGTTTAAGAATCATTACATCAGGGAACATCTAGTTTCAC  950
      |||||||||||||||||||||||||||||||| | |||||||||||||||
seq2  CAATTTTTGATTGTTTAAGAATCATTACATCACGCAACATCTAGTTTCAC  950

seq1  AGAATTCACCAGAGCAGAAGGAGAAAGAAGTAAGAAAGTCAGATATAATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGAATTCACCAGAGCAGAAGGAGAAAGAAGTAAGAAAGTCAGATATAAT-  999

seq1  ATATAACTTTGCA-CACCAAGGCCAACTGAAAAGCAGTCA-CCCACAAGT  1048
      |||| |||||||| |||||||| ||||||||||||||||| |||||||||
seq2  ATAT-ACTTTGCACCACCAAGG-CAACTGAAAAGCAGTCACCCCACAAGT  1047

seq1  GAAA-TCTATACAGCTGTTGCCCAGGGCTAAGGTTAG-AAGAAATAGAAA  1096
      |||| ||||  |||||||||||||||||||| ||||| ||||||||||||
seq2  GAAATTCTAATCAGCTGTTGCCCAGGGCTAA-GTTAGAAAGAAATAGAAA  1096

seq1  CAACTG-TTGTTAC-AAAGAGCTG-CCTCAGGCTACT-GAGATGT  1137
      | |||| ||||||| ||||||||| ||||||  |||| |||||||
seq2  C-ACTGTTTGTTACAAAAGAGCTGCCCTCAGCTTACTGGAGATGT  1140

seq1: chr16_32616860_32618002
seq2: B6Ng01-265I01.g_66_1196 (reverse)

seq1  CCTCGTGAGGCTGGATCTCAAAAAGATGAAAGTCTTGCCTATTATATTGA  50
      ||||||||||||||||||| |||   |||||||| || ||||||||||| 
seq2  CCTCGTGAGGCTGGATCTCGAAA--GTGAAAGTC-TGGCTATTATATTG-  46

seq1  AAATCAGTTCCATGAATTTAAATTCAGCAAAGTCTGGCGAGATGAACACT  100
      |||||||||||||| ||||||  ||||| ||||||||||||||| |||||
seq2  AAATCAGTTCCATG-ATTTAA--TCAGC-AAGTCTGGCGAGATG-ACACT  91

seq1  ATGTGAAGATTCAAGTGAAAAGCAGGTATGTTGTAATAGTAGTAGCTCAT  150
      ||||||||||   |||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAGAT--CAGTGAAAAGCAGGTATGTTGTAATAGTAGTAGCTCAT  139

seq1  TTTATAGAGGTAACTGCTTTGAGATGGTCAGTAGATGAAACTTGCAAAAT  200
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTTATAGAGGTAACTGC-TTGAGATGGTCAGTAGATGAAACTTGCAAAAT  188

seq1  GAAAATCAAGGTAAAAATTTAGAGATTACTTTTCCTAAGCTAATCAATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCAAGGTAAAAATTTAGAGATTACTTTTCCTAAGCTAATCAATGC  238

seq1  AAGTCAAATGCTATGTATACTAACTTGGATTTTTCTTTTAAGGACGGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAATGCTATGTATACTAACTTGGATTTTTCTTTTAAGGACGGCTT  288

seq1  TAACTTTATTTTTTATCTTTTAGCATTGGTCAAAACATGGTGACCATAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTATTTTTTATCTTTTAGCATTGGTCAAAACATGGTGACCATAGT  338

seq1  GCAGTCAAATGGTAACTTAGACCCAGTGGAGTCTCCCGAGGGTTATGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAAATGGTAACTTAGACCCAGTGGAGTCTCCCGAGGGTTATGTGG  388

seq1  CATTCAGTAAACCTACAGAAGTTTCTGTAAGTAAAAATAGTGAAATTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGTAAACCTACAGAAGTTTCTGTAAGTAAAAATAGTGAAATTGAC  438

seq1  TTTCCAGTGTCTCACGAAGGAAATTAGATATCCCGGTATAAATTACTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGTGTCTCACGAAGGAAATTAGATATCCCGGTATAAATTACTGGT  488

seq1  TATGAGATTATTGTTCTTGGACCTTTATTACCTTTGGATGAATTTTAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGATTATTGTTCTTGGACCTTTATTACCTTTGGATGAATTTTAAGG  538

seq1  TCCCATTTTGTTTTGTAAGACCCTAAATCAGTTGGTTCTCAATCTCCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTTGTTTTGTAAGACCCTAAATCAGTTGGTTCTCAATCTCCCCT  588

seq1  TTAATATAGTTTGTCACTGTGGTGATCTCTAACCATGAAATTACCTTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATAGTTTGTCACTGTGGTGATCTCTAACCATGAAATTACCTTTGT  638

seq1  TGCTATTTAATGTCTTGCTGTAAATTCTGCTTTCCAAGGGTCCCCTATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTTAATGTCTTGCTGTAAATTCTGCTTTCCAAGGGTCCCCTATGA  688

seq1  AAAGGGTTCAGACCCAAAGAGTCAGAGATCCACAGGTTGAGAACCTCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTTCAGACCCAAAGAGTCAGAGATCCACAGGTTGAGAACCTCCTG  738

seq1  CCCTAAATCTTGTTGCTCTCCTTATTCAAGACCACTCCTGTTGCAGTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAATCTTGTTGCTCTCCTTATTCAAGACCACTCCTGTTGCAGTTGC  788

seq1  TCTTAAGCATGAGTATGCTCCCATCTGAAAGTCTCCTTATTAGTCACAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGCATGAGTATGCTCCCATCTGAAAGTCTCCTTATTAGTCACAGA  838

seq1  TCAAGAGAATGCCCTACAGCCATGCCAACAAGGGACATTCCCTCAATTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGAATGCCCTACAGCCATGCCAACAAGGGACATTCCCTCAATTTA  888

seq1  AGTTTCTTTCTAATGACTCTGGATTCTGTCAAGTTGACAAACAACACAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTTTCTAATGACTCTGGATTCTGTCAAGTTGACAAACAACACAGC  938

seq1  ACCTGAGATACATAGGTTGTTTTTTGACCTCTGTATAAGCCACATGTACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGATACATAGGTTGTTTTTTGACCTCTGTATAAGCCACATGTACA  988

seq1  CACAATCACAGTTTCTGTGTTTTCAGATGCTTTAGATTCAGATGTGGAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATCACAGTTTCTGTGTTTTCAGATGCTTTAGATTCAGATGTGGAAA  1038

seq1  TATGGAATAAGTGCTTACATGCCTGATCTGTTTGTTTATCCTTTCCCTAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAATAAGTGCTTACATGCCTGATCTGTTTGTTTATCCTTTCCCTAG  1088

seq1  ATATAGTTGAGGCAATGTAAAAGCAGAATGAGATGTAGAATTC  1143
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTGAGGCAATGTAAAAGCAGAATGAGATGTAGAATTC  1131