BAC Information

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BAC

Clone NameB6Ng01-265K09
Chromosome16 (Build37)
Map Location 59,142,736 - 59,143,296
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043477, Dcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194
Downstream geneOlfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884, Arl6, Epha6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265K09.bB6Ng01-265K09.g
ACCGA069242GA069243
length1,215976
definitionB6Ng01-265K09.b B6Ng01-265K09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactggttttaccacattccccatcatcctgaagcagctggtctg
atagaaagatggaatggccttttgaagacgcagttacagcgccaattagg
tggtaacagcttggaaggctggggtagagttcttcagaaggcagtatatg
ctttgaattagcgcttgatatatggcacagtttcacccatagccaggatt
catgggtccaggaatcaaggggtggaaaagggagtagttccatttactat
cattcctagtgaccctctaggaaaatcctccagatacatccatttgtcca
agaatttcataaatccattgtttttaatatctgagtagtactccattgtg
taaatgtacaacattttctgtacccattcttctattgagggacatctggt
ttatttccaccttctggctattataaataaggctgctatgaacataatgg
agcatgtgttcttattaccagttggaacttcttctgggtatatgcccaga
agaggtattgctggatcatccggtagtattatgtccaattttctgaggaa
cctccaggctgacttccagagtggttgtacaagcttgcaatcccaccagc
agtggagaagtgtcctgtcttagttagggttttactgctgtgaacagaca
ccatgactaaggcaagtcttataaaaaacaacatttaattggggctggct
tacaggttcagaggttcagtccattatcattaaggtgggacatggcagta
tccaggcaggcatggcacaaggggagctgagagttctatgtcttcatcca
aaggctgctagtggaagactgacttctaggcaactagagtgaggatctta
tacccacacccagagtgacacacacattccaaccaggtcacacctattcc
aacaaggccacaccttcagatggtgccactccctggttcaaggatataca
aaccatcacatgtccctctttctcacatcctcgccaggatctgctgttac
ctgaattttgatctagccacctccggactggtggtgaggtgaatcctctg
ggtgtttgatttgcatttcctgatgataaggatgtgaacaattttcaggg
tgcctctcagccattgcatcctcagtgagaatctttgtagctctgaccca
attttgagggtatcgaattccggatcacctctggaccttggaatatgatt
tatgtgacccaatga
gaattcatttttctgattccaaactatttttgtggtctcttgcttattca
acaatgaggctaagcacttgtttggttagagttattatggaatattttaa
tttatgaggttattataaagggtgttgtcttgatttcttctggtatattt
gtcaatagtagataggaaggctactgatcttatttattttttagttaatc
atgtatctgaaaaagtataaaagcaaaattctaggcctttaggcccagga
ttgagaatgtgacctctgtgactcaatgctccaaggtatgctaatcataa
aacagatagcaacattcctccacccacccgcttcctgggttcaaagagtg
ttcattcaaagaatgtgctattgttaggggctcttagaaactgtcttgag
agataacccgaacaattaccaggtattccttgtgactcttgtgactttgc
acttccttgggactcttaactggtatatttggtattttccaacaacgcac
tccccacttccttgagttgtggtttcttcctttaaatactgccttaccta
gctactcagggtgccacggtcctttgtgatgtatgaccatgggcccgaga
gtgctcttgaataaaagttctcttgcagtttgtagcaagaccgtttcttg
tgagtgatttggggtgtcgtctctcctgagtcagaacgtgggggagtcct
catgttgtgggtctttcataaccagacatgttactgaaggtatttattaa
ctataggagttccacagagggttttaggatcattttttactatcatatca
tttgcaaataatgatactttgagggtttcctttccaagttttattcccta
cagttctcttattcctctctgttggcattaaaaaactggcctttacagtc
agggaactgtattgtcgcaggtcacctctgaatccagagatgacagtgat
atcacccatagtgacttctaagccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_59142736_59143296
seq2: B6Ng01-265K09.g_68_628 (reverse)

seq1  CCCTGAGTAGCTAGGTAAGGCAGTATTTAAAGGAAGAAACCACAACTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGTAGCTAGGTAAGGCAGTATTTAAAGGAAGAAACCACAACTCAA  50

seq1  GGAAGTGGGGAGTGCGTTGTTGGAAAATACCAAATATACCAGTTAAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGGGGAGTGCGTTGTTGGAAAATACCAAATATACCAGTTAAGAGT  100

seq1  CCCAAGGAAGTGCAAAGTCACAAGAGTCACAAGGAATACCTGGTAATTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGAAGTGCAAAGTCACAAGAGTCACAAGGAATACCTGGTAATTGT  150

seq1  TCGGGTTATCTCTCAAGACAGTTTCTAAGAGCCCCTAACAATAGCACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGTTATCTCTCAAGACAGTTTCTAAGAGCCCCTAACAATAGCACATT  200

seq1  CTTTGAATGAACACTCTTTGAACCCAGGAAGCGGGTGGGTGGAGGAATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAATGAACACTCTTTGAACCCAGGAAGCGGGTGGGTGGAGGAATGT  250

seq1  TGCTATCTGTTTTATGATTAGCATACCTTGGAGCATTGAGTCACAGAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCTGTTTTATGATTAGCATACCTTGGAGCATTGAGTCACAGAGGT  300

seq1  CACATTCTCAATCCTGGGCCTAAAGGCCTAGAATTTTGCTTTTATACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCTCAATCCTGGGCCTAAAGGCCTAGAATTTTGCTTTTATACTTT  350

seq1  TTCAGATACATGATTAACTAAAAAATAAATAAGATCAGTAGCCTTCCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATACATGATTAACTAAAAAATAAATAAGATCAGTAGCCTTCCTAT  400

seq1  CTACTATTGACAAATATACCAGAAGAAATCAAGACAACACCCTTTATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATTGACAAATATACCAGAAGAAATCAAGACAACACCCTTTATAAT  450

seq1  AACCTCATAAATTAAAATATTCCATAATAACTCTAACCAAACAAGTGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCATAAATTAAAATATTCCATAATAACTCTAACCAAACAAGTGCTT  500

seq1  AGCCTCATTGTTGAATAAGCAAGAGACCACAAAAATAGTTTGGAATCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCATTGTTGAATAAGCAAGAGACCACAAAAATAGTTTGGAATCAGA  550

seq1  AAAATGAATTC  561
      |||||||||||
seq2  AAAATGAATTC  561