BAC Information

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BAC

Clone NameB6Ng01-265K17
Chromosome16 (Build37)
Map Location 35,587,273 - 35,756,318
singlet/doubletdoublet
Overlap geneSema5b, Dirc2
Upstream geneRopn1, Ccdc14, Mylk, Ptplb, Adcy5, Sec22a, Pdia5, EG546663
Downstream geneHspbap1, Parp14, LOC667133, LOC100043217, Dtx3l, Parp9, Kpna1, Wdr5b, 2310056P07Rik, Ccdc58, Csta, Stfa2l1, EG433016, EG627962, EG408196, 2010005H15Rik, Stfa1, EG209324, LOC100038854, BC100530, LOC639105, Stfa2, Stfa3, Casr, EG667232, Cd86, Ildr1, LOC667246, Slc15a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265K17.bB6Ng01-265K17.g
ACCGA069258GA069259
length1,1781,069
definitionB6Ng01-265K17.b B6Ng01-265K17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,755,139 - 35,756,318)(35,587,273 - 35,588,347)
sequence
tcctgccttgttgaggtacaagggactggaagaaagcattccagtcaagg
ctgagagtctacgtggaataggttaagcaacccttggcaacaatgaaaca
aaaagcctgcttctagtttctctgtttgtataactgtgctatatccgtcc
aaaattgcttgagtgatgagcttttcagaggctcctcattcttacactta
tataagctattacagcatcatatatttgaataaaagcaccctgcgtagaa
gagtcctgggcagtggcaataggttatctggaccacacagcacagccagt
gccccactgcctcttggctgcctctacaattataagcagaatccttaaga
ggaagataaaccttgtgcgcaatataaaatataaagctctgtctgctgtc
tcattgggtgcccagaataactgaaaacaagtactgtcctgcagttttag
ggtatttatggccatgtgtgtatttcccattaattacaccatttcctgtg
gctaaactgccatttccaagcctgtatattgctggtagaagcagtaatga
gcagtatgtatgcatcccttgttaccaggaagcacaactctctgtggcat
tccttctgccaaattgcattaatcatattcagattatataagaatattat
aaagtttgccccattcataacacagagtattctcagtgtggcgtttatgt
gcctgatctggatcttaaatttatttccctgtgatgtttgttctgcataa
tcatcgttttgtttactttcagtttccttcaagccgagaagaaatttgaa
aatcaaacacttaaccatctaccctctactaatttttttttttctgaaaa
ggaaaacatttcattaattgtttagctctgttttctctgtggcatggttt
tctaatgttgaatttgggactatttgaaagaatttggggctacctgtacc
atggcttacttgagtcacctgagtgatgtggctgccacagacataagtat
agtagttcagtataagaacagaagaacggcattccaaacatgggcagaat
gcagcgccattatatcggttcattatgtatcacactgcaggggtgaatac
cctcagctgtcatgtggtattttcagtacgtgcctctctttccaatcggt
cctggacaaaataacatgcctagcatct
gaattctcacattctcctggaaagggccacaaagtttgggggtgtttttg
tagtgggtggagcgaattccgctgagagatttttctgacttgccctgagt
cagactggtttctgccccttccagtctgtttctggaggaggctgcagagg
tgtctccacaatagaatgaggcattgggggtatctagcgcttatagccac
ctgagagctgtgtagcctggcaggatgctccagtgtaaacactcctgccc
tttcagtgcctctggtaagacctgggcagggattttcctgttgcttcacc
tgggtctccagaggaacagaatgccctaacatctctctcctgctgctggc
atttagcccattgctgggttaattcaagcaatactaataacctgtttgca
gggaggagacctcttgcagacccttaaatcctgctctctggggcactgat
aacagactaagaatcctgtctggcccccctgcagccatcaaacagtgtgc
tcaagtctgtgtggctggatgctgcaaaaacacggaaagaaacagcattt
gtgtttatcccctgatactggcatccaggaggagggccgaagcgatggtt
tcagtgtttagaagggctccctctctcctaccgcctgcccccatggcttc
cctttcctgagtcttctgtctctttcctcctctgttagatgtagggcgtc
agtctcccgcagatcgtccaatgccagcccatctggatctatcagatcag
gctccccattcctttttggctgcctctgtgagggcctgggcccagtggag
acctctccgggcctctgtgcggtctccaaggagcctggaagcaatgcagt
gagagaaagcagtctccccgcccctcccccaccacgctcctcttgcccac
gtctcccacccactcagctccttgaaggtctggcctgttccccctttgcc
ctccaaactcatgttttatgcagacatcgccattctcatgggaagtgcgg
caaagtttggggaaagaattgggaaagatgttccgacgctttgagagggt
ggagcgattgcggttatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_35755139_35756318
seq2: B6Ng01-265K17.b_58_1235 (reverse)

seq1  AGATGCTTTTGGGCATGGTATTTGTCCCAGGAACAGATT-GAAAGAGAAG  49
      ||||||   | |||||| |||||   ||||| || |||| ||||||| ||
seq2  AGATGC---TAGGCATGTTATTTTGTCCAGG-ACCGATTGGAAAGAG-AG  45

seq1  GCACGGTAACTAGAAATA-CACATGACAGCTGAGTGTATTCACACCTGCA  98
      |||||   |||  ||||| ||||||||||||||| |||||||| ||||||
seq2  GCACG--TACTGAAAATACCACATGACAGCTGAGGGTATTCACCCCTGCA  93

seq1  GTGTGAATACATAATGAA-CGATATAATGGCGCTGCA-TCTGCCCATGTT  146
      ||||| |||||||||||| |||||||||||||||||| ||||||||||||
seq2  GTGTG-ATACATAATGAACCGATATAATGGCGCTGCATTCTGCCCATGTT  142

seq1  TGGAATGCCGTTCTTCTGT--CTATACTGAACTACTATTACCTTATGTCT  194
      |||||||||||||||||||   ||||||||||||||||   |||||||||
seq2  TGGAATGCCGTTCTTCTGTTCTTATACTGAACTACTAT--ACTTATGTCT  190

seq1  GTGGCAGCCACATCACTCAGGTGACTCAAGTAAGCCATGGTACAGGTAGC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGCCACATCACTCAGGTGACTCAAGTAAGCCATGGTACAGGTAGC  240

seq1  CCCAAATTCTTTCAAATAGTCCCAAATTCAACATTAG-AAACCATGCCAC  293
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCCAAATTCTTTCAAATAGTCCCAAATTCAACATTAGAAAACCATGCCAC  290

seq1  AGAGAAAACAGAGCTAAACAATTAATGAAATGTTTTCCTTTTCAG-AAAA  342
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGAGAAAACAGAGCTAAACAATTAATGAAATGTTTTCCTTTTCAGAAAAA  340

seq1  AAAAAATTAGTAGAGGGTAGATGGTTAAGTGTTTGATTTTCAAATTTCTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTAGTAGAGGGTAGATGGTTAAGTGTTTGATTTTCAAATTTCTT  390

seq1  CTCGGCTTGAAGGAAACTGAAAGTAAACAAAACGATGATTATGCAGAACA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGCTTGAAGGAAACTGAAAGTAAACAAAACGATGATTATGCAGAACA  440

seq1  AACATCACAGGGAAATAAATTTAAGATCCAGATCAGGCACATAAACGCCA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCACAGGGAAATAAATTTAAGATCCAGATCAGGCACATAAACGCCA  490

seq1  CACTGAGAATACTCTGTGTTATGAATGGGGCAAACTTTATAATATTCTTA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGAATACTCTGTGTTATGAATGGGGCAAACTTTATAATATTCTTA  540

seq1  TATAATCTGAATATGATTAATGCAATTTGGCAGAAGGAATGCCACAGAGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCTGAATATGATTAATGCAATTTGGCAGAAGGAATGCCACAGAGA  590

seq1  GTTGTGCTTCCTGGTAACAAGGGATGCATACATACTGCTCATTACTGCTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGCTTCCTGGTAACAAGGGATGCATACATACTGCTCATTACTGCTT  640

seq1  CTACCAGCAATATACAGGCTTGGAAATGGCAGTTTAGCCACAGGAAATGG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAGCAATATACAGGCTTGGAAATGGCAGTTTAGCCACAGGAAATGG  690

seq1  TGTAATTAATGGGAAATACACACATGGCCATAAATACCCTAAAACTGCAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTAATGGGAAATACACACATGGCCATAAATACCCTAAAACTGCAG  740

seq1  GACAGTACTTGTTTTCAGTTATTCTGGGCACCCAATGAGACAGCAGACAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTACTTGTTTTCAGTTATTCTGGGCACCCAATGAGACAGCAGACAG  790

seq1  AGCTTTATATTTTATATTGCGCACAAGGTTTATCTTCCTCTTAAGGATTC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTATATTTTATATTGCGCACAAGGTTTATCTTCCTCTTAAGGATTC  840

seq1  TGCTTATAATTGTAGAGGCAGCCAAGAGGCAGTGGGGCACTGGCTGTGCT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATAATTGTAGAGGCAGCCAAGAGGCAGTGGGGCACTGGCTGTGCT  890

seq1  GTGTGGTCCAGATAACCTATTGCCACTGCCCAGGACTCTTCTACGCAGGG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTCCAGATAACCTATTGCCACTGCCCAGGACTCTTCTACGCAGGG  940

seq1  TGCTTTTATTCAAATATATGATGCTGTAATAGCTTATATAAGTGTAAGAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTATTCAAATATATGATGCTGTAATAGCTTATATAAGTGTAAGAA  990

seq1  TGAGGAGCCTCTGAAAAGCTCATCACTCAAGCAATTTTGGACGGATATAG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGCCTCTGAAAAGCTCATCACTCAAGCAATTTTGGACGGATATAG  1040

seq1  CACAGTTATACAAACAGAGAAACTAGAAGCAGGCTTTTTGTTTCATTGTT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTATACAAACAGAGAAACTAGAAGCAGGCTTTTTGTTTCATTGTT  1090

seq1  GCCAAGGGTTGCTTAACCTATTCCACGTAGACTCTCAGCCTTGACTGGAA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGGGTTGCTTAACCTATTCCACGTAGACTCTCAGCCTTGACTGGAA  1140

seq1  TGCTTTCTTCCAGTCCCTTGTACCTCAACAAGGCAGGA  1180
      ||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCTTCCAGTCCCTTGTACCTCAACAAGGCAGGA  1178

seq1: chr16_35587273_35588347
seq2: B6Ng01-265K17.g_69_1137

seq1  GAATTCTCACATTCTCCTGGAAAGGGCCACAAAGTTTGGGGGTGTTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACATTCTCCTGGAAAGGGCCACAAAGTTTGGGGGTGTTTTTG  50

seq1  TAGTGGGTGGAGCGAATTCCGCTGAGAGATTTTTCTGACTTGCCCTGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGGTGGAGCGAATTCCGCTGAGAGATTTTTCTGACTTGCCCTGAGT  100

seq1  CAGACTGGTTTCTGCCCCTTCCAGTCTGTTTCTGGAGGAGGCTGCAGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGGTTTCTGCCCCTTCCAGTCTGTTTCTGGAGGAGGCTGCAGAGG  150

seq1  TGTCTCCACAATAGAATGAGGCATTGGGGGTATCTAGCGCTTATAGCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCACAATAGAATGAGGCATTGGGGGTATCTAGCGCTTATAGCCAC  200

seq1  CTGAGAGCTGTGTAGCCTGGCAGGATGCTCCAGTGTAAACACTCCTGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGCTGTGTAGCCTGGCAGGATGCTCCAGTGTAAACACTCCTGCCC  250

seq1  TTTCAGTGCCTCTGGTAAGACCTGGGCAGGGATTTTCCTGTTGCTTCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTGCCTCTGGTAAGACCTGGGCAGGGATTTTCCTGTTGCTTCACC  300

seq1  TGGGTCTCCAGAGGAACAGAATGCCCTAACATCTCTCTCCTGCTGCTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTCCAGAGGAACAGAATGCCCTAACATCTCTCTCCTGCTGCTGGC  350

seq1  ATTTAGCCCATTGCTGGGTTAATTCAAGCAATACTAATAACCTGTTTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCCCATTGCTGGGTTAATTCAAGCAATACTAATAACCTGTTTGCA  400

seq1  GGGAGGAGACCTCTTGCAGACCCTTAAATCCTGCTCTCTGGGGCACTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAGACCTCTTGCAGACCCTTAAATCCTGCTCTCTGGGGCACTGAT  450

seq1  AACAGACTAAGAATCCTGTCTGGCCCCCCTGCAGCCATCAAACAGTGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACTAAGAATCCTGTCTGGCCCCCCTGCAGCCATCAAACAGTGTGC  500

seq1  TCAAGTCTGTGTGGCTGGATGCTGCAAAAACACGGAAAGAAACAGCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTCTGTGTGGCTGGATGCTGCAAAAACACGGAAAGAAACAGCATTT  550

seq1  GTGTTTATCCCCTGATACTGGCATCCAGGAGGAGGGCCGAAGCGATGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTATCCCCTGATACTGGCATCCAGGAGGAGGGCCGAAGCGATGGTT  600

seq1  TCAGTGTTTAGAAGGGCTCCCTCTCTCCTACCGCCTGCCCCCATGGCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTTTAGAAGGGCTCCCTCTCTCCTACCGCCTGCCCCCATGGCTTC  650

seq1  CCTTTCCTGAGTCTTCTGTCTCTTTCCTCCTCTGTTAGATGTAGGGCGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCTGAGTCTTCTGTCTCTTTCCTCCTCTGTTAGATGTAGGGCGTC  700

seq1  AGTCTCCCGCAGATCGTCCAATGCCAGCCCATCTGGATCTATCAGATCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCCGCAGATCGTCCAATGCCAGCCCATCTGGATCTATCAGATCAG  750

seq1  GCTCCCCATTCCTTTTTGGCTGCCTCTGTGAGGGCCTGGGCCCAGTGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCATTCCTTTTTGGCTGCCTCTGTGAGGGCCTGGGCCCAGTGGAG  800

seq1  ACCTCTCCGGGCCTCTGTGCGGTCTCCAAGGAGCCTGGAAGCAATGCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCCGGGCCTCTGTGCGGTCTCCAAGGAGCCTGGAAGCAATGCAGT  850

seq1  GAGAGAAAGCAGTCTCCCCGCCCCTCCCCCACCACGCTCCTCTTGCCCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAAGCAGTCTCCCCGCCCCTCCCCCACCACGCTCCTCTTGCCCAC  900

seq1  GTCTCCCACCCACTCAGCTCCTTG-AGGTCTGGCCTGTTCCCCCTTTGCC  949
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTCTCCCACCCACTCAGCTCCTTGAAGGTCTGGCCTGTTCCCCCTTTGCC  950

seq1  CTCCAAAACTCATGTTTTATGCAAGAACATCGCCATTCTCATGGAAAGTG  999
      |||| ||||||||||||||||||   |||||||||||||||||| |||||
seq2  CTCC-AAACTCATGTTTTATGCA--GACATCGCCATTCTCATGGGAAGTG  997

seq1  CGGCAAAGTTT-GGGAAAGAATTGGGAAAGAATGTCCGACCGCTTTTGAA  1048
      ||||||||||| |||||||||||||||||||   ||||| ||||||   |
seq2  CGGCAAAGTTTGGGGAAAGAATTGGGAAAGATGTTCCGA-CGCTTT--GA  1044

seq1  GAGGGTGGAGCGAATGCGGGGTTATAG  1075
      ||||||||||||| |||  ||||||||
seq2  GAGGGTGGAGCGATTGC--GGTTATAG  1069