BAC Information

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BAC

Clone NameB6Ng01-266B22
Chromosome16 (Build37)
Map Location 22,641,262 - 22,642,436
singlet/doubletsinglet
Overlap genenone
Upstream geneVps8, 2510009E07Rik, Ehhadh, LOC100043489, LOC546659, Map3k13, LOC624037, Tmem41a, Liph, Senp2, EG239760, Igf2bp2, EG545152, EG666421, Sfrs10, LOC100043507, Etv5, Dgkg, LOC671242
Downstream geneLOC666459, Crygs, Tbccd1, Dnajb11, Ahsg, Fetub, Hrg, Kng2, LOC624311, LOC666486, LOC666489, Kng1, LOC666493, Eif4a2, Rfc4, Adipoq, LOC100043541, EG625835, BC106179, St6gal1, Rtp1, Masp1, LOC100043018, Rtp4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266B22.bB6Ng01-266B22.g
ACCGA069597GA069598
length1,170680
definitionB6Ng01-266B22.b B6Ng01-266B22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctggaagctagtgggacaggtagaccggaataatgatgtcatga
gcaccaagaatggaaaaggaagacacacttgatgttgtcctttgacctct
aagctgtggtacctgtaaaccagtgctcacaaacacaaacctgaaaaaaa
gataatagaggtttcttagcaattgcctggtacacgagagtcagcgatgg
cgaccctctacctgattttatcagatatggggaaacacaagattcccgga
tgctctgagcactctcataaatgatcaagggctttggaatgaaaagatag
gattttaaaggagatgggcagtagatttcagtttaaggaaaagaatggga
ggaaaggagtacactttcaaggtcaagacatacgagataaagctgtaaaa
agtatagaatttcccctccgtgcttacaggaagcggatggataaagcaga
gaccgctcgccttagtgagcagccgctcacaggttaggagggggactgga
ggagggcagcagacctaggagagacgaacagtgactcatctggctaaaag
catttaatgaattgccacccagctgcagggactggcctttgtgggccagt
cactttgaagtaggcaaaaatagccaacagaaaccagccccacacgagaa
gaaaggggaaaataattttatttgattggctgacattgttttgatcagaa
tgtgaagtcacatgctgacttgggctagtcagaaagacaccctgtcgctg
acggagtcagagcagtttccattgctccagcctttaccaggtatgactta
ctctgcagtcagaccactctcaaacccaccctccacaattaaaggactct
tccagtggaaatgccgctctgcacattcactaagcttggtaaatcccctt
cttccaaaatctcagtagaggatcagaatccacgtctcacagcttggtgt
gatggttcaactctgcttttttcctgtcactctgttctgtccctgagatc
ctggcttcctcactggctggcatcagctacagtcttcagagctgctctgc
gtaggagccctcacagtagctgctagttcgattatttttcgtacgcagga
ccagttggctagtcagttggtactggttccttttcatggtgtcaagggtc
tcagcatccagagacactga
tctgtctgcctgtgtccctgtctctctctctgcccacgccccgctccccc
agcagtccccgtccccgtgcacgcgcgcgcgcgcacacacacacacatac
aaaatgtattttgatgatatcccgattatccactttacccatccccatac
tgaattcctttctaataaatgttcctcctttcacatatttgttgttctta
tttactgtttttgctccctttggtatgtttcggttttgttttgttctgga
gggtggaggtgggtggtatttaattctatctttgttggatctttctgtgg
tttaggtatcagagtaatagtggcttcttaaaatgagttgggtagagtac
cttctacttctattttgtgaaatagtttgtgcagaattggaattagatct
tctttgaaggtctgatagaactctgcagtaaacccatctggtcctgggct
ttttttggttgggagactattaataactgcttctatttctttaggtgata
tgggactgtttagatggtcaacttgatcctgattcaactttggtacctgg
tatctgtccagaaatttgtccatttcgtccaggttttccagttttgttga
ttatacccttttgtagaaggatctgatggtgttttggatttcttcaggat
ctgtttgttatgtctcccttttctatttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_22641262_22642436
seq2: B6Ng01-266B22.b_41_1210

seq1  GAATTCCTGGAAGCTAGTGGGACAGGTAGACCGGAATAATGATGTCATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGAAGCTAGTGGGACAGGTAGACCGGAATAATGATGTCATGA  50

seq1  GCACCAAGAATGGAAAAGGAAGACACACTTGATGTTGTCCTTTGACCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAAGAATGGAAAAGGAAGACACACTTGATGTTGTCCTTTGACCTCT  100

seq1  AAGCTGTGGTACCTGTAAACCAGTGCTCACAAACACAAACCTGAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTGGTACCTGTAAACCAGTGCTCACAAACACAAACCTGAAAAAAA  150

seq1  GATAATAGAGGTTTCTTAGCAATTGCCTGGTACACGAGAGTCAGCGATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATAGAGGTTTCTTAGCAATTGCCTGGTACACGAGAGTCAGCGATGG  200

seq1  CGACCCTCTACCTGATTTTATCAGATATGGGGAAACACAAGATTCCCGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCCTCTACCTGATTTTATCAGATATGGGGAAACACAAGATTCCCGGA  250

seq1  TGCTCTGAGCACTCTCATAAATGATCAAGGGCTTTGGAATGAAAAGATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGAGCACTCTCATAAATGATCAAGGGCTTTGGAATGAAAAGATAG  300

seq1  GATTTTAAAGGAGATGGGCAGTAGATTTCAGTTTAAGGAAAAGAATGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTAAAGGAGATGGGCAGTAGATTTCAGTTTAAGGAAAAGAATGGGA  350

seq1  GGAAAGGAGTACACTTTCAAGGTCAAGACATACGAGATAAAGCTGTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGAGTACACTTTCAAGGTCAAGACATACGAGATAAAGCTGTAAAA  400

seq1  AGTATAGAATTTCCCCTCCGTGCTTACAGGAAGCGGATGGATAAAGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAGAATTTCCCCTCCGTGCTTACAGGAAGCGGATGGATAAAGCAGA  450

seq1  GACCGCTCGCCTTAGTGAGCAGCCGCTCACAGGTTAGGAGGGGGACTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCGCTCGCCTTAGTGAGCAGCCGCTCACAGGTTAGGAGGGGGACTGGA  500

seq1  GGAGGGCAGCAGACCTAGGAGAGACGAACAGTGACTCATCTGGCTAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGCAGCAGACCTAGGAGAGACGAACAGTGACTCATCTGGCTAAAAG  550

seq1  CATTTAATGAATTGCCACCCAGCTGCAGGGACTGGCCTTTGTGGGCCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATGAATTGCCACCCAGCTGCAGGGACTGGCCTTTGTGGGCCAGT  600

seq1  CACTTTGAAGTAGGCAAAAATAGCCAACAGAAACCAGCCCCACACGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGAAGTAGGCAAAAATAGCCAACAGAAACCAGCCCCACACGAGAA  650

seq1  GAAAGGGGAAAATAATTTTATTTGATTGGCTGACATTGTTTTGATCAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGGAAAATAATTTTATTTGATTGGCTGACATTGTTTTGATCAGAA  700

seq1  TGTGAAGTCACATGCTGACTTGGGCTAGTCAGAAAGACACCCTGTCGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGTCACATGCTGACTTGGGCTAGTCAGAAAGACACCCTGTCGCTG  750

seq1  ACGGAGTCAGAGCAGTTTCCATTGCTCCAGCCTTTACCAGGTATGACTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAGTCAGAGCAGTTTCCATTGCTCCAGCCTTTACCAGGTATGACTTA  800

seq1  CTCTGCAGTCAGACCACTCTCAAACCCACCCTCCACAATTAAAGGACTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAGTCAGACCACTCTCAAACCCACCCTCCACAATTAAAGGACTCT  850

seq1  TCCAGTGGAAATGCCGCTCTGCACATTCACTAAGCTTGGTAAATCCCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGGAAATGCCGCTCTGCACATTCACTAAGCTTGGTAAATCCCCTT  900

seq1  CTTCCAAAATCTCAGTAGAGGATCAGAATCCACGTCTCACAG-TTGGTGT  949
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTTCCAAAATCTCAGTAGAGGATCAGAATCCACGTCTCACAGCTTGGTGT  950

seq1  GATGGTTCACCTCTGCTTTTTTCCTGTCACTCTGTTCTGTCCCTGAGATC  999
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTCAACTCTGCTTTTTTCCTGTCACTCTGTTCTGTCCCTGAGATC  1000

seq1  CTGGGCTTCCTCACTGGCTGGCATCAGCTTCCAGTCTTCAGAGCTGCTCT  1049
      || ||||||||||||||||||||||||| | |||||||||||||||||||
seq2  CT-GGCTTCCTCACTGGCTGGCATCAGC-TACAGTCTTCAGAGCTGCTCT  1048

seq1  GCGTAGGAGCCCTTCACAGAAGCTGCTAGTTTCGATTA-TTTTCTAACGC  1098
      |||||||||||| |||||| ||||||||| |||||||| |||||  ||||
seq2  GCGTAGGAGCCC-TCACAGTAGCTGCTAG-TTCGATTATTTTTCGTACGC  1096

seq1  AAGAACCAAGTTGGCT-GTCAGTTTGTACCTGTTTCCTTTTTCAT-GTGT  1146
      | ||  | |||||||| ||||||| ||| ||| |||| ||||||| ||||
seq2  AGGA--CCAGTTGGCTAGTCAGTTGGTA-CTGGTTCC-TTTTCATGGTGT  1142

seq1  TCAGGGTCTTCAGCATCCAGAGACACTGA  1175
        |||||| ||||||||||||||||||||
seq2  CAAGGGTC-TCAGCATCCAGAGACACTGA  1170