BAC Information

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BAC

Clone NameB6Ng01-266C05
Chromosome16 (Build37)
Map Location 86,469,416 - 86,470,295
singlet/doubletsinglet
Overlap genenone
Upstream geneCyyr1, LOC100039994, LOC622000, Adamts1, Adamts5, LOC100040025, LOC100039780
Downstream geneN6amt1, Zfp294, ORF5, LOC100040088, Usp16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266C05.bB6Ng01-266C05.g
ACCGA069609GA069610
length1,0161,180
definitionB6Ng01-266C05.b B6Ng01-266C05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccagatatggcagtctctagatcgtccatcctttggtctcagct
ccaaactttgtctctgtaactccttccatgggtgttttgttcccaattct
aagaagggggaaagtgtccacactttggtcttcgttcttcttgagtttca
tgtgttttgcaaattgtatcttatatcttgggtattctaagtttctgggc
taatatccacttttcagtgagtacatatcaggtgagttcttttgtgattg
ggttacctcactcaggatgatgccctccaggtccatccatttgcctagga
atttcataaattcattctttttaatagctgagcagtactccattgtgtaa
atgtaccacatttcctgtgtccattcttctgttgagggcatctgggttct
ttccagcttctggctattataaataaggctgctatgaacataatggagca
tgtgtccttattaccagttggaacatcttctggatatatgcccaggagag
gtattgcgggatcctccggtagtatcatgtccaattttctgaggaaccgc
cagactgatttccagagtggttgtacaagcttgcaatcccaccaacaatg
gaggaatgttcctctttctccacatcctcaccagcacctgctgtcacctg
agtttttgatcttagccattctgactggttggtgtgaggtggaatctcag
ggtagttttgatttgcatttccctgatgattaaggatgctgaacgttttt
tcaggttcttctcagccatttgttattcctcatgtgagaattctttgttt
agctctgagccccatttttaatggggttatttgattttctggagtctacc
ttcttgtgttctttatatatattggatattattcccctatctgatttagg
ataggtaaagatcctttcccaatctgttggttgcctttttgtcttattga
tggtgtcttttgccttacttgccaaagcaatctacagattcaatgcaatc
cccatcaaatttccaa
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtgcc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgaaggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagcatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattag
tctacttgtctgtctctataccagtaccatgcagtttttatcacaatttc
tctgtagtaaagctttaggtcaggtatggtgattccaccagagcttcttt
tatccttgagaagaatttttgctatcctaggttttttgttattccagatg
aatttgcaaattgcttcttctaattcgttgaagtattgatttggaatttt
gatggggattgcattgaatctgtagattccttttggcaaggtagccattt
ttaatatatggattctgcagtaataattgaggcaattaccctaaatgatc
agtcatatgtaaaaagttacattcatgtctgcaataaaatcctgtgaatc
gctcatgcttagcatgctcaagatatcctaccttgatcctcagtaacatg
ccctcaaatgtggtatattctctgtttcatttatgtacagcttgaaggag
atttgtgggggaggagtgggttgacagagtgcagtgtgtgacataatgtg
tgagtccagtgtgaaaatatctattaaaaatcagtaaaacacatggcttt
aaagatgtatcgctgccagggcgtactggcctggattcaccacttgggag
gcaaagcaggtgggaattctgagagtttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_86469416_86470295
seq2: B6Ng01-266C05.g_385_1246

seq1  CAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGATTTGACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGATTTGACCT  50

seq1  TAGTACAAGGAGATAAGCATGGATCGATTCGCATTCTTCTACATGATAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACAAGGAGATAAGCATGGATCGATTCGCATTCTTCTACATGATAAC  100

seq1  AACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTCTTCCACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTCTTCCACTG  150

seq1  GATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGTGTGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGTGTGGGT  200

seq1  TCATTTCTGGGTCTTCAATTCTATTCCATTAGTCTACTTGTCTGTCTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTGGGTCTTCAATTCTATTCCATTAGTCTACTTGTCTGTCTCTA  250

seq1  TACCAGTACCATGCAGTTTTTATCACAATTTCTCTGTAGTAAAGCTTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGTACCATGCAGTTTTTATCACAATTTCTCTGTAGTAAAGCTTTAG  300

seq1  GTCAGGTATGGTGATTCCACCAGAGCTTCTTTTATCCTTGAGAAGAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGTATGGTGATTCCACCAGAGCTTCTTTTATCCTTGAGAAGAATTT  350

seq1  TTGCTATCCTAGGTTTTTTGTTATTCCAGATGAATTTGCAAATTGCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATCCTAGGTTTTTTGTTATTCCAGATGAATTTGCAAATTGCTTCT  400

seq1  TCTAATTCGTTGAAGTATTGATTTGGAATTTTGATGGGGATTGCATTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTCGTTGAAGTATTGATTTGGAATTTTGATGGGGATTGCATTGAA  450

seq1  TCTGTAGATTCCTTTTGGCAAGGTAGCCATTTTTAATATATGGATTCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGATTCCTTTTGGCAAGGTAGCCATTTTTAATATATGGATTCTGC  500

seq1  AGTAATAATTGAGGCAATTACCCTAAATGATCAGTCATATGTAAAAAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATAATTGAGGCAATTACCCTAAATGATCAGTCATATGTAAAAAGTT  550

seq1  ACATTCATGTCTGCAATAAAATCCTGTGAATCGCTCATGCTTAGCATGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCATGTCTGCAATAAAATCCTGTGAATCGCTCATGCTTAGCATGCT  600

seq1  CAAGATATCCTACCTTTGATCCTCAGTAACATGCCCTCAAATGTGGTATA  650
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAAGATATCCTACC-TTGATCCTCAGTAACATGCCCTCAAATGTGGTATA  649

seq1  TTCTCTGTTTTCATTTATGTAACAGCTTGAAAGAGATTTGT-GGGGAGGA  699
      ||||||| |||||||||||| |||||||||| ||||||||| ||||||||
seq2  TTCTCTG-TTTCATTTATGT-ACAGCTTGAAGGAGATTTGTGGGGGAGGA  697

seq1  GTGGGTTGACAAGAGTGGCAGTGTGTGACCATTATGTGTTGAGTCCAAGT  749
      |||||||||| ||||| ||||||||||| ||| ||||| ||||||| |||
seq2  GTGGGTTGAC-AGAGT-GCAGTGTGTGA-CATAATGTG-TGAGTCC-AGT  742

seq1  GTGAAAATATCTAATAAAAAAAATCAGTAAAACAGCATGGTTTAAAAAGA  799
      ||||||||||||| |   |||||||||||||||| ||||| || |||   
seq2  GTGAAAATATCTATT---AAAAATCAGTAAAACA-CATGGCTTTAAA--G  786

seq1  ATGTATACAGCCTGGCAGGGGTGGTACTTGCCTTGAATTCTACCACTTGG  849
      ||||||     ||| |||||   ||||| ||| || |||| |||||||||
seq2  ATGTAT---CGCTGCCAGGG--CGTACTGGCC-TGGATTC-ACCACTTGG  829

seq1  GAGGCAGAGGCAGGT-GGATTTCT--GAGTTTGA  880
      |||||| | |||||| ||| ||||  ||||||||
seq2  GAGGCA-AAGCAGGTGGGAATTCTGAGAGTTTGA  862