BAC Information

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BAC

Clone NameB6Ng01-266C10
Chromosome16 (Build37)
Map Location 15,873,512 - 16,004,227
singlet/doubletdoublet
Overlap geneCebpd, 2310008H04Rik
Upstream geneEfcab1, LOC100042737, LOC665653, LOC385748, LOC100042743, LOC547302, EG632352, Ube2v2, LOC665682, Mcm4, Prkdc, 2410018G20Rik
Downstream geneLOC100043266, LOC224010, D16Ertd727e, Pkp2, EG433003, Yars2, Dnm1l, LOC665743, Fgd4, Olfr19, 4933404G15Rik, Spag6, EG665562, EG436405, Vpreb1, Top3b, Ppm1f, LOC100042783, EG623519, Mapk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266C10.bB6Ng01-266C10.g
ACCGA069619GA069620
length1,1531,167
definitionB6Ng01-266C10.b B6Ng01-266C10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,003,061 - 16,004,227)(15,873,512 - 15,874,679)
sequence
gaattcacttatgtttcatgattgtaactagtgactagcttgaaaagctg
aatattagggaaacaatgtctgagtcatggacagcctctccaaatggcta
tctgattttccctctccttttctctgctgagtttttactgcttatcagaa
acaggattttcagtgggtagcctgcccacttccagagccctctccctaag
ccacttctgttcttgtcacattccttgtttgttctgaaatcttaatctgt
cttttctagtgtttatccttaacctgcttcttagcttgcatgctaagatt
tcccttcagcttgttctaatgtgtttttggttgatctgccactgtttgag
ccagttgatgaaccacctctaaattcctagtatttctgccctattctgtc
tgaaatgtcttgactttccgtttagacatctcttattcttttttgtgatg
tctcttagttttcagctgagtgggcttcaaacattatagttttttcttag
ttttgttttaacttgtgtttctcatattgtatttgccatattcttcttgg
cagtttggttctacttcctttgttgtagatttctaacttctttagaacag
aaagtataaatattctacagaaaacagattttctgcgatagaattgctat
aattttgattgatatatatgatattacagacatgctagtgaatgcttgta
atcacaagctcttggggtctgaggcaggatagttaagagttccagggtag
ccggggctaatctgtttatcaagatctatcattgaaacaaacaaataaaa
ccctttattcttagaaggaagaggagaaaaaaagaggagaagcaggagga
gtagtattatcattagcattatattagccagcctgagttaataaattctg
ggagattcttatctattagtcataagatgttactttcaacactaagtggt
catggaattgctgttctggctgctcaagataagtaattagtgtctggacc
agtacactacatctctcacagtacacttgttcttcagtatttttcatagt
ctctgcaaacacagcttcttttcaggagtgatctttacaatgggaaatca
ttttctataatcatataaacaagggagctggtcagatgtgatggacattt
gcc
gaattcttgagactatttagagctaaacgctttcaagtggtgatggacgt
gggaaatgaactcagtaactgatcagaaactggtttagaggcaatctagt
atgattggtaatttaaacacgtttgtcctcatctatccttagtggggaag
aaaactgagaactagtaaatgttgggacctccgagtctctccatagtcca
cacaaacactgatctcagacagggatggtttgttgaatacacaccccaat
actgaacgatcagtctttggggctgaaactataaccctgaaaaatgttca
gggcaggcttataaaggaaaatatcacaatgaactcatgtacaggtgtaa
gaagtgctgcctggtggtcagatctggctcaagctattttgggtagctag
atagaacagttctaattgacttctggctgctgctgtaaatattttccttt
gggcttggcagcaggatattccttgggatctccttctcatttgccactcc
cagaaaatacctgttttgttcccaccaatcaaaaccctgtcaccttgtga
ccctaggttgtttggcttttccttgcctccttcctacactactcatgtta
gcacagtctagaggccaatcccaggttccaatgtcatatgataacatggg
tgtctctttataaagttgatttcaggagtagatgactattgatttgtgca
tcactgtcagaatagttgtctgctggtgtaattctgctcccatgtccttt
agtatctgaaaatgcatggaattggcccaactcagagctggccaggccac
gtcagagaagcacccctgtgcatcagcagttcaagttgcctcacagcaga
gaaggggaactcatcttgatgaactgaaggggagatttccactcctgggt
gctttgttggccaggtccactctcatgatattcacagttgtgctgcctgg
ctaactgaccagttgtctagagagtttgggatgctcaaaagaatacctgg
ggcgggataagaagccttagaagatatttactgttagcattcctagcttt
gtatatcaggacatgagctgagagctataactggtattactaccacaccc
acgattgcaaaagaaatattggccagaatcttaagaagcatctcaggtca
tggccatacgtacttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_16003061_16004227
seq2: B6Ng01-266C10.b_50_1202 (reverse)

seq1  GGCAAATATTCCCATCACATTCCTGACAAGCT-CCTGGTTTATATGATTT  49
      ||||||| |  |||||||||  ||||| |||| ||| |||||||||||| 
seq2  GGCAAATGT--CCATCACAT--CTGACCAGCTCCCTTGTTTATATGATT-  45

seq1  ATTAGAAAATGGAATTTCCCCATGTAAAGATCAACTCCTGAAAAGAAGCT  99
        |||||||||  |||||||  |||||||||| |||||||||||||||||
seq2  -ATAGAAAATG--ATTTCCCATTGTAAAGATC-ACTCCTGAAAAGAAGCT  91

seq1  GTGTTTGCAGAGACTATGAAAAATTAACTG-AGAACAAGTGTACTGTGGA  148
      ||||||||||||||||||||||||  |||| |||||||||||||||| ||
seq2  GTGTTTGCAGAGACTATGAAAAAT--ACTGAAGAACAAGTGTACTGT-GA  138

seq1  GAGATTGTAGTGTTACTGGTCCAGACACTAATTACCTTATCTTGAGCAGC  198
      |||| ||||||| ||||||||||||||||||||| |||||||||||||||
seq2  GAGA-TGTAGTG-TACTGGTCCAGACACTAATTA-CTTATCTTGAGCAGC  185

seq1  CAGAACAGCAATTCCATGACCACCTTAGTGTTGAAAGTAACATCTTATGA  248
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAGAACAGCAATTCCATGACCA-CTTAGTGTTGAAAGTAACATCTTATGA  234

seq1  CTAATAGATAAGAATCTCCCAGAATTTATTAACTCAGGCTGGCTAATATA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAGATAAGAATCTCCCAGAATTTATTAACTCAGGCTGGCTAATATA  284

seq1  ATGCTAATGATAATACTACTCCTCCTGCTTCTCCTCTTTTTTTCTCCTCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAATGATAATACTACTCCTCCTGCTTCTCCTCTTTTTTTCTCCTCT  334

seq1  TCCTTCTAAGAATAAAGGGTTTTATTTGTTTGTTTCAATGATAGATCTTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTAAGAATAAAGGGTTTTATTTGTTTGTTTCAATGATAGATCTTG  384

seq1  ATAAACAGATTAGCCCCGGCTACCCTGGAACTCTTAACTATCCTGCCTCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAGATTAGCCCCGGCTACCCTGGAACTCTTAACTATCCTGCCTCA  434

seq1  GACCCCAAGAGCTTGTGATTACAAGCATTCACTAGCATGTCTGTAATATC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCAAGAGCTTGTGATTACAAGCATTCACTAGCATGTCTGTAATATC  484

seq1  ATATATATCAATCAAAATTATAGCAATTCTATCGCAGAAAATCTGTTTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATCAATCAAAATTATAGCAATTCTATCGCAGAAAATCTGTTTTC  534

seq1  TGTAGAATATTTATACTTTCTGTTCTAAAGAAGTTAGAAATCTACAACAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAATATTTATACTTTCTGTTCTAAAGAAGTTAGAAATCTACAACAA  584

seq1  AGGAAGTAGAACCAAACTGCCAAGAAGAATATGGCAAATACAATATGAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTAGAACCAAACTGCCAAGAAGAATATGGCAAATACAATATGAGA  634

seq1  AACACAAGTTAAAACAAAACTAAGAAAAAACTATAATGTTTGAAGCCCAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAGTTAAAACAAAACTAAGAAAAAACTATAATGTTTGAAGCCCAC  684

seq1  TCAGCTGAAAACTAAGAGACATCACAAAAAAGAATAAGAGATGTCTAAAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGAAAACTAAGAGACATCACAAAAAAGAATAAGAGATGTCTAAAC  734

seq1  GGAAAGTCAAGACATTTCAGACAGAATAGGGCAGAAATACTAGGAATTTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTCAAGACATTTCAGACAGAATAGGGCAGAAATACTAGGAATTTA  784

seq1  GAGGTGGTTCATCAACTGGCTCAAACAGTGGCAGATCAACCAAAAACACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGGTTCATCAACTGGCTCAAACAGTGGCAGATCAACCAAAAACACA  834

seq1  TTAGAACAAGCTGAAGGGAAATCTTAGCATGCAAGCTAAGAAGCAGGTTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACAAGCTGAAGGGAAATCTTAGCATGCAAGCTAAGAAGCAGGTTA  884

seq1  AGGATAAACACTAGAAAAGACAGATTAAGATTTCAGAACAAACAAGGAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAACACTAGAAAAGACAGATTAAGATTTCAGAACAAACAAGGAAT  934

seq1  GTGACAAGAACAGAAGTGGCTTAGGGAGAGGGCTCTGGAAGTGGGCAGGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAAGAACAGAAGTGGCTTAGGGAGAGGGCTCTGGAAGTGGGCAGGC  984

seq1  TACCCACTGAAAATCCTGTTTCTGATAAGCAGTAAAAACTCAGCAGAGAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACTGAAAATCCTGTTTCTGATAAGCAGTAAAAACTCAGCAGAGAA  1034

seq1  AAGGAGAGGGAAAATCAGATAGCCATTTGGAGAGGCTGTCCATGACTCAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAGGGAAAATCAGATAGCCATTTGGAGAGGCTGTCCATGACTCAG  1084

seq1  ACATTGTTTCCCTAATATTCAGCTTTTCAAGCTAGTCACTAGTTACAATC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTTTCCCTAATATTCAGCTTTTCAAGCTAGTCACTAGTTACAATC  1134

seq1  ATGAAACATAAGTGAATTC  1167
      |||||||||||||||||||
seq2  ATGAAACATAAGTGAATTC  1153

seq1: chr16_15873512_15874679
seq2: B6Ng01-266C10.g_68_1234

seq1  GAATTCTTGAGACTATTTAGAGCTAAACGCTTTCAAGTGGTGATGGACGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAGACTATTTAGAGCTAAACGCTTTCAAGTGGTGATGGACGT  50

seq1  GGGAAATGAACTCAGTAACTGATCAGAAACTGGTTTAGAGGCAATCTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATGAACTCAGTAACTGATCAGAAACTGGTTTAGAGGCAATCTAGT  100

seq1  ATGATTGGTAATTTAAACACGTTTGTCCTCATCTATCCTTAGTGGGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGGTAATTTAAACACGTTTGTCCTCATCTATCCTTAGTGGGGAAG  150

seq1  AAAACTGAGAACTAGTAAATGTTGGGACCTCCGAGTCTCTCCATAGTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGAGAACTAGTAAATGTTGGGACCTCCGAGTCTCTCCATAGTCCA  200

seq1  CACAAACACTGATCTCAGACAGGGATGGTTTGTTGAATACACACCCCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACACTGATCTCAGACAGGGATGGTTTGTTGAATACACACCCCAAT  250

seq1  ACTGAACGATCAGTCTTTGGGGCTGAAACTATAACCCTGAAAAATGTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACGATCAGTCTTTGGGGCTGAAACTATAACCCTGAAAAATGTTCA  300

seq1  GGGCAGGCTTATAAAGGAAAATATCACAATGAACTCATGTACAGGTGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGGCTTATAAAGGAAAATATCACAATGAACTCATGTACAGGTGTAA  350

seq1  GAAGTGCTGCCTGGTGGTCAGATCTGGCTCAAGCTATTTTGGGTAGCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGCTGCCTGGTGGTCAGATCTGGCTCAAGCTATTTTGGGTAGCTAG  400

seq1  ATAGAACAGTTCTAATTGACTTCTGGCTGCTGCTGTAAATATTTTCCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACAGTTCTAATTGACTTCTGGCTGCTGCTGTAAATATTTTCCTTT  450

seq1  GGGCTTGGCAGCAGGATATTCCTTGGGATCTCCTTCTCATTTGCCACTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGGCAGCAGGATATTCCTTGGGATCTCCTTCTCATTTGCCACTCC  500

seq1  CAGAAAATACCTGTTTTGTTCCCACCAATCAAAACCCTGTCACCTTGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATACCTGTTTTGTTCCCACCAATCAAAACCCTGTCACCTTGTGA  550

seq1  CCCTAGGTTGTTTGGCTTTTCCTTGCCTCCTTCCTACACTACTCATGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGTTGTTTGGCTTTTCCTTGCCTCCTTCCTACACTACTCATGTTA  600

seq1  GCACAGTCTAGAGGCCAATCCCAGGTTCCAATGTCATATGATAACATGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTCTAGAGGCCAATCCCAGGTTCCAATGTCATATGATAACATGGG  650

seq1  TGTCTCTTTATAAAGTTGATTTCAGGAGTAGATGACTATTGATTTGTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTTATAAAGTTGATTTCAGGAGTAGATGACTATTGATTTGTGCA  700

seq1  TCACTGTCAGAATAGTTGTCTGCTGGTGTAATTCTGCTCCCATGTCCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTCAGAATAGTTGTCTGCTGGTGTAATTCTGCTCCCATGTCCTTT  750

seq1  AGTATCTGAAAATGCATGGAATTGGCCCAACTCAGAGCTGGCCAGGCCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTGAAAATGCATGGAATTGGCCCAACTCAGAGCTGGCCAGGCCAC  800

seq1  GTCAGAGAAGCACCCCTGTGCATCAGCAGTTCAAGTTGCCTCACAGCAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGAAGCACCCCTGTGCATCAGCAGTTCAAGTTGCCTCACAGCAGA  850

seq1  GAAGGGGAACTCATCTTGATGAACTGAAGGGGAGATTTCCACTCCTGGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGAACTCATCTTGATGAACTGAAGGGGAGATTTCCACTCCTGGGT  900

seq1  GCTTTGTTGGCCAGGTCCACTCTCATGATATTCACAGTTGTGCTGCCTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTTGGCCAGGTCCACTCTCATGATATTCACAGTTGTGCTGCCTGG  950

seq1  CTAACTGACCAGTTGTCTAGAGAGTTTGGGATGCTCAAAAGAATACCTGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTGACCAGTTGTCTAGAGAGTTTGGGATGCTCAAAAGAATACCTGG  1000

seq1  GCGGGGAT-AGAAGCCTTAGAAGATATTTACTG-TAGCATTCCTAG-TTT  1047
      |  ||||| |||||||||||||||||||||||| |||||||||||| |||
seq2  GGCGGGATAAGAAGCCTTAGAAGATATTTACTGTTAGCATTCCTAGCTTT  1050

seq1  GTATATCAGGAACATGAAGCTGAGAGCTTAATTAACTGGTATTACTAACA  1097
      |||||||||| ||||| |||||||||||    ||||||||||||||| ||
seq2  GTATATCAGG-ACATG-AGCTGAGAGCT---ATAACTGGTATTACTACCA  1095

seq1  CAACCACAGATGGAAAAG-AATATTGCCCAGAATCTT-AGAAGCATTCTC  1145
      || ||||   || ||||| ||||||| |||||||||| ||||||| ||||
seq2  CACCCACGATTGCAAAAGAAATATTGGCCAGAATCTTAAGAAGCA-TCTC  1144

seq1  AGGTCAGTGGCATACTTACTTGG  1168
      ||||||  | ||||| |||||||
seq2  AGGTCATGGCCATACGTACTTGG  1167