BAC Information

Click to search

BAC

Clone NameB6Ng01-266F24
Chromosome16 (Build37)
Map Location 35,837,041 - 35,956,608
singlet/doubletdoublet
Overlap geneParp14, LOC667133, LOC100043217, Dtx3l, Parp9
Upstream geneMylk, Ptplb, Adcy5, Sec22a, Pdia5, Sema5b, EG546663, Dirc2, Hspbap1
Downstream geneKpna1, Wdr5b, 2310056P07Rik, Ccdc58, Csta, Stfa2l1, EG433016, EG627962, EG408196, 2010005H15Rik, Stfa1, EG209324, LOC100038854, BC100530, LOC639105, Stfa2, Stfa3, Casr, EG667232, Cd86, Ildr1, LOC667246, Slc15a2, LOC667023, Eaf2, Iqcb1, LOC628101, Golgb1, Hcls1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266F24.bB6Ng01-266F24.g
ACCGA069787GA069788
length1,188627
definitionB6Ng01-266F24.b B6Ng01-266F24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,955,408 - 35,956,608)(35,837,041 - 35,837,668)
sequence
gaattccacccacggcatttgagcactgtgatctcttccagttatatacc
ctcgatcatctccctagctcagggagtcagacaagcatcagtgtgccact
cacctgccgctcccaggtcaacaaagagacagttcagtgagagagatgga
gactaaaagaagagaacagtatccctttaatattatgacgatccactggg
tagcttctcccagagaagtgccgagagctaggaagactcagacttccatc
aacttttttctttttcatttttttaagatcaggtctcactacacagctct
ggctggtctaaaactcactatatagagtaggtggcctcaatgtctgagag
ctctgcctgcctctgcctcacagggtctgggattatgtgaggaagtctgc
cttagtgggatagcttttctgagctggggacaaaatggggggctcccctt
accaacagggcttccccttccctgaccttctctcgggacccgaattccac
gccctctacctgagggaggtcaagtagtccttgacagacctacaagttca
acttcctcttttccagataagaacccagccagccacctgagatttctgga
ctgcctctccatgcaaagaaggcattcaccgaactttaaaccccagccaa
ttactttcacttttctataaactcctttcttactctccaaaatccatata
tagccctggttcactctgaataaaatgtacgtgtacaagcctaccctaaa
taaaggtatgtatacaagtcaggattgtctaagagagctgtttcattgaa
gatggacagagaaaggcctttggctaaaagagctatataacactaagacc
atcagagtgctcccccccctccactcattcccaattgtactggaatcctg
caaaattccacccataaatgccctgagagggagaaggcagaggacacaga
accacagctggaccccaaacgcataccacagctggcactcaatgtggggc
acagccaactgacctatacaacagaattttaaaaagtagccgcatgccag
gctaatttcatcactttcaatattgcattgaattgctaatatagaacagg
gagattgttctggtggaaactgccaaagatgagcataagaaatatgcgaa
tcatctagattacgaactagagaggtacaagacatggc
gaattcaggacctctggaaaagcagtcagtgctctcaaccactgagccat
ctctccagccccaattcccacacatttttatatgatttagttgtgttttg
ttgttgttgttgttgagttttttttggtttggtttggtttggttttggtt
tttttgagacagggtttctctgtatagtcctggctgtcctggaactcact
ctgtagagcaggctggccttgaactcagaaattcacctgcctctgcctcc
caagttctggggttaaaggtgtgtgccactaccacccggcacatgattta
gtatttgtatatcatgtctcctttttattatttacccaactgtttctcag
cttcaactgtgttgggaaaaaaaaaaaaaagaacaattttatattcattc
atcttaaattttgtcatttaactcagtttttcaaacttccaaaatttttg
ttttgaaattcccagttttttaatttaaaattttaaaagagcagtttctc
aaaaacaccacttaattatttcagacttggtggtatagttcagtggaagg
atgaatgcttagtgtatatgagaccttaggttcaatttccagcaccatgg
aaaaaaagaaaggcaggagggagaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_35955408_35956608
seq2: B6Ng01-266F24.b_49_1236 (reverse)

seq1  GCCATGTCTTGT-CCTCTCTTAGTTCTGTAATCCTAGATTGGATCTCCAA  49
      |||||||||||| |||||| |||||| ||||| ||||||  ||| ||  |
seq2  GCCATGTCTTGTACCTCTC-TAGTTC-GTAAT-CTAGAT--GAT-TCGCA  44

seq1  TTATTCTCTATGCTTCATCTTTCCAAGGTTTTCCCACAG-ACAATCTCCC  98
      |  |||| ||||| ||||||||   ||  |||||  ||| ||||||||||
seq2  TATTTCT-TATGC-TCATCTTTGGCAG--TTTCCACCAGAACAATCTCCC  90

seq1  TG-TCTATA-TAGCAATTCAATGCAATATTGAAAAGTTGATGGAAAATTA  146
      || |||||| ||||||||||||||||||||||||   |||||  ||||||
seq2  TGTTCTATATTAGCAATTCAATGCAATATTGAAA--GTGATG--AAATTA  136

seq1  GCCTGGCATGCGGCCTACTTTTTTAAAATTCCTGTTGTATAGGTCAGTTG  196
      ||||||||||||| |||| ||||||||||| |||||||||||||||||||
seq2  GCCTGGCATGCGG-CTAC-TTTTTAAAATT-CTGTTGTATAGGTCAGTTG  183

seq1  GCTGTGCCCCACATTGAGTGCCAGCTGTGGTATGCGTTTTGGGGTCCAGC  246
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCTGTGCCCCACATTGAGTGCCAGCTGTGGTATGCG-TTTGGGGTCCAGC  232

seq1  TGTGGTTCTGTGTCCTCTGCCTTCTCCCTCTCAGGGCATTTATGGGTGGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTCTGTGTCCTCTGCCTTCTCCCTCTCAGGGCATTTATGGGTGGA  282

seq1  ATTTTGCAGGATTCCAGTACAATTGGGAATGAGTGGAGGGGGGGGAGCAC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCAGGATTCCAGTACAATTGGGAATGAGTGGAGGGGGGGGAGCAC  332

seq1  TCTGATGGTCTTAGTGTTATATAGCTCTTTTAGCCAAAGGCC-TTCTCTG  395
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCTGATGGTCTTAGTGTTATATAGCTCTTTTAGCCAAAGGCCTTTCTCTG  382

seq1  TCCATCTTCAATGAAACAGCTCTCTTAGACAATCCTGACTTGTATACATA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTTCAATGAAACAGCTCTCTTAGACAATCCTGACTTGTATACATA  432

seq1  CCTTTATTTAGGGTAGGCTTGTACACGTACATTTTATTCAGAGTGAACCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTTAGGGTAGGCTTGTACACGTACATTTTATTCAGAGTGAACCA  482

seq1  GGGCTATATATGGATTTTGGAGAGTAAGAAAGGAGTTTATAGAAAAGTGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTATATATGGATTTTGGAGAGTAAGAAAGGAGTTTATAGAAAAGTGA  532

seq1  AAGTAATTGGCTGGGGTTTAAAGTTCGGTGAATGCCTTCTTTGCATGGAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATTGGCTGGGGTTTAAAGTTCGGTGAATGCCTTCTTTGCATGGAG  582

seq1  AGGCAGTCCAGAAATCTCAGGTGGCTGGCTGGGTTCTTATCTGGAAAAGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGTCCAGAAATCTCAGGTGGCTGGCTGGGTTCTTATCTGGAAAAGA  632

seq1  GGAAGTTGAACTTGTAGGTCTGTCAAGGACTACTTGACCTCCCTCAGGTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTGAACTTGTAGGTCTGTCAAGGACTACTTGACCTCCCTCAGGTA  682

seq1  GAGGGCGTGGAATTCGGGTCCCGAGAGAAGGTCAGGGAAGGGGAAGCCCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCGTGGAATTCGGGTCCCGAGAGAAGGTCAGGGAAGGGGAAGCCCT  732

seq1  GTTGGTAAGGGGAGCCCCCCATTTTGTCCCCAGCTCAGAAAAGCTATCCC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTAAGGGGAGCCCCCCATTTTGTCCCCAGCTCAGAAAAGCTATCCC  782

seq1  ACTAAGGCAGACTTCCTCACATAATCCCAGACCCTGTGAGGCAGAGGCAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGCAGACTTCCTCACATAATCCCAGACCCTGTGAGGCAGAGGCAG  832

seq1  GCAGAGCTCTCAGACATTGAGGCCACCTACTCTATATAGTGAGTTTTAGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCTCTCAGACATTGAGGCCACCTACTCTATATAGTGAGTTTTAGA  882

seq1  CCAGCCAGAGCTGTGTAGTGAGACCTGATCTTAAAAAAATGAAAAAGAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCAGAGCTGTGTAGTGAGACCTGATCTTAAAAAAATGAAAAAGAAA  932

seq1  AAAGTTGATGGAAGTCTGAGTCTTCCTAGCTCTCGGCACTTCTCTGGGAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGATGGAAGTCTGAGTCTTCCTAGCTCTCGGCACTTCTCTGGGAG  982

seq1  AAGCTACCCAGTGGATCGTCATAATATTAAAGGGATACTGTTCTCTTCTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTACCCAGTGGATCGTCATAATATTAAAGGGATACTGTTCTCTTCTT  1032

seq1  TTAGTCTCCATCTCTCTCACTGAACTGTCTCTTTGTTGACCTGGGAGCGG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTCCATCTCTCTCACTGAACTGTCTCTTTGTTGACCTGGGAGCGG  1082

seq1  CAGGTGAGTGGCACACTGATGCTTGTCTGACTCCCTGAGCTAGGGAGATG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGAGTGGCACACTGATGCTTGTCTGACTCCCTGAGCTAGGGAGATG  1132

seq1  ATCGAGGGTATATAACTGGAAGAGATCACAGTGCTCAAATGCCGTGGGTG  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAGGGTATATAACTGGAAGAGATCACAGTGCTCAAATGCCGTGGGTG  1182

seq1  GAATTC  1201
      ||||||
seq2  GAATTC  1188

seq1: chr16_35837041_35837668
seq2: B6Ng01-266F24.g_66_692

seq1  GAATTCAGGACCTCTGGAAAAGCAGTCAGTGCTCTCAACCACTGAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACCTCTGGAAAAGCAGTCAGTGCTCTCAACCACTGAGCCAT  50

seq1  CTCTCCAGCCCCAATTCCCACACATTTTTATATGATTTAGTTGTGTTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGCCCCAATTCCCACACATTTTTATATGATTTAGTTGTGTTTTG  100

seq1  TTGTTGTTGTTGTTGAGTTTTTTTTGGTTTGGTTTGGTTTGGTTTTGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTGTTGTTGAGTTTTTTTTGGTTTGGTTTGGTTTGGTTTTGGTT  150

seq1  TTTTTGAGACAGGGTTTCTCTGTATAGTCCTGGCTGTCCTGGAACTCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGACAGGGTTTCTCTGTATAGTCCTGGCTGTCCTGGAACTCACT  200

seq1  CTGTAGAGCAGGCTGGCCTTGAACTCAGAAATTCACCTGCCTCTGCCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGAGCAGGCTGGCCTTGAACTCAGAAATTCACCTGCCTCTGCCTCC  250

seq1  CAAGTTCTGGGGTTAAAGGTGTGTGCCACTACCACCCGGCACATGATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCTGGGGTTAAAGGTGTGTGCCACTACCACCCGGCACATGATTTA  300

seq1  GTATTTGTATATCATGTCTCCTTTTTATTATTTACCCAACTGTTTCTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGTATATCATGTCTCCTTTTTATTATTTACCCAACTGTTTCTCAG  350

seq1  CTTCAACTGTGTTGGGAAAAAAAAAAAAAAGAACAATTTTATATTCATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAACTGTGTTGGGAAAAAAAAAAAAAAGAACAATTTTATATTCATTC  400

seq1  ATCTTAAATTTTGTCATTTAACTCAGTTTTTCAAACTTCCAAAATTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAATTTTGTCATTTAACTCAGTTTTTCAAACTTCCAAAATTTTTG  450

seq1  TTTTGAAATTCCCAGTTTTTTAATTTAAAATTTTAAAAGAGCAGTTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTTGAAATTCCCAGTTTTTTAATTTAAAATTTTAAAAGAGCAGTTTCTC  500

seq1  AAAAACAGCACTTAATTATTTCAGACTTGGTGGTATAGTTCAGTGGAAGG  550
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACACCACTTAATTATTTCAGACTTGGTGGTATAGTTCAGTGGAAGG  550

seq1  ATGAATGCTTAGTGTATATGAGACCTTAGGTTCAATTTCCAGCACCATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGCTTAGTGTATATGAGACCTTAGGTTCAATTTCCAGCACCATGG  600

seq1  AAAAAAGAAAGGGCAGGAGGGAGGAAGG  628
      ||||||  || ||||||||||| |||||
seq2  AAAAAAAGAAAGGCAGGAGGGA-GAAGG  627