BAC Information

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BAC

Clone NameB6Ng01-266G24
Chromosome16 (Build37)
Map Location 35,955,486 - 35,956,110
singlet/doubletsinglet
Overlap geneParp9
Upstream geneMylk, Ptplb, Adcy5, Sec22a, Pdia5, Sema5b, EG546663, Dirc2, Hspbap1, Parp14, LOC667133, LOC100043217, Dtx3l
Downstream geneKpna1, Wdr5b, 2310056P07Rik, Ccdc58, Csta, Stfa2l1, EG433016, EG627962, EG408196, 2010005H15Rik, Stfa1, EG209324, LOC100038854, BC100530, LOC639105, Stfa2, Stfa3, Casr, EG667232, Cd86, Ildr1, LOC667246, Slc15a2, LOC667023, Eaf2, Iqcb1, LOC628101, Golgb1, Hcls1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266G24.bB6Ng01-266G24.g
ACCGA069835GA069836
length1,128336
definitionB6Ng01-266G24.b B6Ng01-266G24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccgtgttctagtctcgaaagttgcgttaactgtgtcacagaatgt
gcacaagacttggagtacagcggtttctgaatcagttcaaatctctctat
cttgaatcatgtagcgtgatgtgcaaatcatttgtcctcttgacttccat
gactaaaacagcaaaataaagtgttctccatgccttgagggacatgagag
gagcaaataaaataacatgtattactacactaggaattttaccagctatt
acgtagctgggcacactacaattgatgttacgtatctagtttattgattt
gatggtttgttttttaaaagccctacaaagtttgcttgttgctatatcta
agacgtttataatctttagcacttactgggatttatatatgtatataaat
atataggtatatatatatatatctgggtacggatgggggggctcccctta
ccaacagggcttccccttccctgaccttctctcgggacccgaattccacg
ccctctacctgagggaggtcaagtagtccttgacagacctacaagttcaa
cttcctcttttccagataagaacccagccagccacctgagatttctggac
tgcctctccatgcagagaaagcattcaccgaactttagaccccagccaat
tactttcacttttctataaactcctttcttactctccaaaatccatatat
agccctggttcactctgaataaaatgtacgtgtacaagcctaccctaaat
aaaggtatgtatacaagtcaggattgtctaagagagctgtttcattgaag
atggacagagaaaggcctttggctaaaagagctatataacactaagacca
tcagagtgctccccctccctccactcattcccaattgtactggaatcctg
caaaatttccacccataaatgccctgagagggagaaggcagaggaccaca
gaacaacagctggaccccaaaacggcataccactagctgggcactcatgt
ggggcacagccaacctgacctatacaacagggaattttaaaaagtaggcg
catgccaggcctattttccagtcacctttcaattatgcattgattgctat
atagacaggcgaatttgtctgtgggaaa
tcgctctcttcttctccacctgttgtattctccccctgtgtagggtttcg
ggctcaatatgctctgtcagagggtaaggcaactggggagggttgactct
gggagtcccacaccattgccagggccggtgctgggccacagagaagcatg
gaagcattgctttgggggtggagaagcacagtctgagatgtgggaaagcc
agacctgtcttggggttccttgggcctgcaatgaggccagggccatggag
ttctcaggctcttggacatccaggagccactgggcgtcatgaagagcaga
gtggagtgggctggatttagtccagggcagaggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_35955486_35956110
seq2: B6Ng01-266G24.b_538_1168 (reverse)

seq1  TTTCCCACAGACAATCTC-CCTGTCTATATAGCAATTCAATGCAATATTG  49
      ||||||||||||||  || |||||||||||||||| ||||||||  ||||
seq2  TTTCCCACAGACAAATTCGCCTGTCTATATAGCAA-TCAATGCATAATTG  49

seq1  AAAAGTTGATGGAAAATTAGCCTGGCATGCGGCCTACTTTTTTAAAATTC  99
      ||| ||   ||||||||  ||||||||||| ||||||||||| ||| | |
seq2  AAAGGTGACTGGAAAATAGGCCTGGCATGC-GCCTACTTTTTAAAATTCC  98

seq1  CTGTTGTATAGGTCA-GTTGGCTGTGCCCCACATTGAGTG-CCAGCT-GT  146
      ||||||||||||||| ||||||||||||||||| |||||| |||||| ||
seq2  CTGTTGTATAGGTCAGGTTGGCTGTGCCCCACA-TGAGTGCCCAGCTAGT  147

seq1  GGTATG-CGTTTTGGGGTCCAGCTGTGGTTCTGT-GTCCTCTGCCTTCTC  194
      |||||| ||||||||||||||||||| ||||||| |||||||||||||||
seq2  GGTATGCCGTTTTGGGGTCCAGCTGTTGTTCTGTGGTCCTCTGCCTTCTC  197

seq1  CCTCTCAGGGCATTTATGGGTGG-AATTTTGCAGGATTCCAGTACAATTG  243
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCTCTCAGGGCATTTATGGGTGGAAATTTTGCAGGATTCCAGTACAATTG  247

seq1  GGAATGAGTGGAGGG-GGGGGAGCACTCTGATGGTCTTAGTGTTATATAG  292
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGAATGAGTGGAGGGAGGGGGAGCACTCTGATGGTCTTAGTGTTATATAG  297

seq1  CTCTTTTAGCCAAAGGCC-TTCTCTGTCCATCTTCAATGAAACAGCTCTC  341
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTCTTTTAGCCAAAGGCCTTTCTCTGTCCATCTTCAATGAAACAGCTCTC  347

seq1  TTAGACAATCCTGACTTGTATACATACCTTTATTTAGGGTAGGCTTGTAC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACAATCCTGACTTGTATACATACCTTTATTTAGGGTAGGCTTGTAC  397

seq1  ACGTACATTTTATTCAGAGTGAACCAGGGCTATATATGGATTTTGGAGAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTACATTTTATTCAGAGTGAACCAGGGCTATATATGGATTTTGGAGAG  447

seq1  TAAGAAAGGAGTTTATAGAAAAGTGAAAGTAATTGGCTGGGGTTTAAAGT  491
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAAGAAAGGAGTTTATAGAAAAGTGAAAGTAATTGGCTGGGGTCTAAAGT  497

seq1  TCGGTGAATGCCTTCTTTGCATGGAGAGGCAGTCCAGAAATCTCAGGTGG  541
      ||||||||||| |||| |||||||||||||||||||||||||||||||||
seq2  TCGGTGAATGCTTTCTCTGCATGGAGAGGCAGTCCAGAAATCTCAGGTGG  547

seq1  CTGGCTGGGTTCTTATCTGGAAAAGAGGAAGTTGAACTTGTAGGTCTGTC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGGGTTCTTATCTGGAAAAGAGGAAGTTGAACTTGTAGGTCTGTC  597

seq1  AAGGACTACTTGACCTCCCTCAGGTAGAGGGCGT  625
      ||||||||||||||||||||||||||||||||||
seq2  AAGGACTACTTGACCTCCCTCAGGTAGAGGGCGT  631