BAC Information

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BAC

Clone NameB6Ng01-267H18
Chromosome16 (Build37)
Map Location 87,579,667 - 87,580,788
singlet/doubletsinglet
Overlap geneORF63
Upstream geneN6amt1, Zfp294, ORF5, LOC100040088, Usp16, Cct8, B130034C11Rik, LOC435486
Downstream geneBach1, LOC100039901, Grik1, EG622373, Cldn17, Cldn8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267H18.bB6Ng01-267H18.g
ACCGA070591GA070592
length1,2341,123
definitionB6Ng01-267H18.b B6Ng01-267H18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggagcatacaacaaaccaatagccaatatgaaactaaatgga
gagaaacttaaaagcaatcccattaaaataagggacaagacaaggctgcc
catctctctctacctactcaatatagtactcaaaggtctagccagagcaa
ttaagacagcaaaaagagatcaaagggatacaaattgggagtaaggaagt
caagataacactatttgcagatgatatgttagtatatataaccgacccca
aaaattctaccagcaagcttctatagctgataaacaacttcagccaagtg
gctggatataaaattaagtctaacaaatcagtaaccttcctctactcaaa
ggataaaatggctaagaaagaaattatggaaatcacaatctttacaatag
ttgcaaataatataaaatatctgggtgtgattttaaccaagcaagtgaaa
tgtatgtatggcaaaaacttcaaatccctgaagaaaggaatcaaagaagg
cctcagaagatggaaagatctcccatgctcatggattggcaggattaata
tagtaaaaatggccatcttaccaaaagcaatctacatattcaatgcaatc
cccatcaaaattccaacccaattcttcatagagttagaaagatcaattct
caaattcatttggaataacaaaacacctagaataatgaaaaatattctca
acaataaaagtcctcttctggtggaaccaccatccctaaactcaagctgt
cctgcagaacaatagtgataaataactacatggtactggtacaaagacag
gcaggtagatcaatggaatagaattgaagacccagaaatgaacccacaca
cctatggtcacttgatctttgacaagggagcaaaaaccatccagtggaaa
aaagacagcattttcaacaatgctggcagttagcatgcagaagaatgcaa
atgggatccattcttatctccttgtacaaaagctcaagtccaagttgata
gaaggacctcccacataaaatcaggaacacaactgaactaatagagaaga
aaaatgggggaacaagtctcaaacacaatggcaatggggggtaaaattct
ttaacagaaacacatgcttatgccttcaggaatcacaatgaacaaccgga
cctcattaattgaaaggcttctgtattccatggacactgtcatcaggaca
aaacggccaagcttcaggattgtgggcagatcga
gaattcctacttccagaaatcatttttaaagaactagttttccatgagtt
tttattcttatttctacatcaccaatgcgtgattccaaacacaattgctt
ggaatcgaagttaattgtcttttaatgggtttttaaatcactccctaatt
atttatgggggaaaacccatgtaaaatctgataaccatgaaagtttgctg
ctgaacaagttatttggtcttatctgacattataatcgccgtaggtaaac
agtgtgtctaactaggtaccatcttcactaatttatattagtaaagtatg
aactaaaggatttcttactatttctttccatattcttcaaacacacagat
ttctttgggtgggcattttatttgctcagccaataacagaaataaagttt
atcctctggccgatagctaagacgaccctgctcactcaaaggaagtaaaa
ttctaaatagatgtacacctaactgacatgtcacactgaggtttgttaac
atgcacaattaatgcatattaccaagttccacaatattttcaaattctca
ttaggacaaattttacattcgtgtgaatcctcattgtttgcttaatttat
gtagaatctaacaatgatcactttgcggggcatctttctcgggatccctg
tgggcacatttacaacatcaacccagctggctgcaactatgatcctttgc
aatacagaaaaatatgggaaactagggcacagtagtgtgacaatatagtt
caccctgggagccaaagcctttgccaaaggaatccggaactcctggctcc
tccaggctgtgtcccagaaatcgcaacccactcgccaattttcacctgtt
acgctggcacgttaccaagcttaacagtcagtggaatgaaggcaacatag
ctcgcgtccccagagcccaagctcttaaatcatcggtgccctgtcaaagg
ttttgcctactggcagccaatagattacacatgtcatgcggtcctccata
aacagagcatagccaccacctcggtttcaagccaggaattcagccatcgc
tgccgcttgcaaagtaactggaccgtgattcagcggctgctaaatgtcat
agtcaagatcagtcctggcatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_87579667_87580788
seq2: B6Ng01-267H18.g_70_1192 (reverse)

seq1  TCATG-CAGGACTGATTCCTTTGACTATGACATTAAGCAGCCGCTGAATT  49
      ||||| ||||||||||    |||||||||||||| ||||||||||||| |
seq2  TCATGCCAGGACTGAT---CTTGACTATGACATTTAGCAGCCGCTGAA-T  46

seq1  CACGGTCCAGGTACTTTGCAGGCGGCAAGCGATGGGCTGAATTC--TGCT  97
      |||||||||| ||||||||| ||||| |||||| ||||||||||   |||
seq2  CACGGTCCAGTTACTTTGCAAGCGGC-AGCGAT-GGCTGAATTCCTGGCT  94

seq1  TG-AACCGAG--TGTGGCTTATGCTCTGTTTAT-GAGGACCGCATGACAT  143
      || |||||||   ||||| |||||||||||||| ||||||||||||||||
seq2  TGAAACCGAGGTGGTGGC-TATGCTCTGTTTATGGAGGACCGCATGACAT  143

seq1  GTGTAATCTTATGGCTGCCAGTAGGCAAAACCTTTGACAGGGCACCGATG  193
      |||||||||  |||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATCTATTGGCTGCCAGTAGGCAAAACCTTTGACAGGGCACCGATG  193

seq1  ATTTAAGAGCTT-GGCTCTGGGGACGCGAGCTATGTTGCCTTCATTCCAC  242
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGAGCTTGGGCTCTGGGGACGCGAGCTATGTTGCCTTCATTCCAC  243

seq1  TGACTGTTAAGCTTGGTAACGTGCCAGCGTAACAGGTGAAAATTGGCGAG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTTAAGCTTGGTAACGTGCCAGCGTAACAGGTGAAAATTGGCGAG  293

seq1  TGGGTTGCGATTTCTGGGACACAGCCTGGAGGAGCCAGGAGTTCCGGATT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGCGATTTCTGGGACACAGCCTGGAGGAGCCAGGAGTTCCGGATT  343

seq1  CCTTTGGCAAAGGCTTTGGCTCCCAGGGTGAACTATATTGTCACACTACT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGCAAAGGCTTTGGCTCCCAGGGTGAACTATATTGTCACACTACT  393

seq1  GTGCCCTAGTTTCCCATATTTTTCTGTATTGCAAAGGATCATAGTTGCAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCTAGTTTCCCATATTTTTCTGTATTGCAAAGGATCATAGTTGCAG  443

seq1  CCAGCTGGGTTGATGTTGTAAATGTGCCCACAGGGATCCCGAGAAAGATG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGGGTTGATGTTGTAAATGTGCCCACAGGGATCCCGAGAAAGATG  493

seq1  CCCCGCAAAGTGATCATTGTTAGATTCTACATAAATTAAGCAAACAATGA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGCAAAGTGATCATTGTTAGATTCTACATAAATTAAGCAAACAATGA  543

seq1  GGATTCACACGAATGTAAAATTTGTCCTAATGAGAATTTGAAAATATTGT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCACACGAATGTAAAATTTGTCCTAATGAGAATTTGAAAATATTGT  593

seq1  GGAACTTGGTAATATGCATTAATTGTGCATGTTAACAAACCTCAGTGTGA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTTGGTAATATGCATTAATTGTGCATGTTAACAAACCTCAGTGTGA  643

seq1  CATGTCAGTTAGGTGTACATCTATTTAGAATTTTACTTCCTTTGAGTGAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCAGTTAGGTGTACATCTATTTAGAATTTTACTTCCTTTGAGTGAG  693

seq1  CAGGGTCGTCTTAGCTATCGGCCAGAGGATAAACTTTATTTCTGTTATTG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTCGTCTTAGCTATCGGCCAGAGGATAAACTTTATTTCTGTTATTG  743

seq1  GCTGAGCAAATAAAATGCCCACCCAAAGAAATCTGTGTGTTTGAAGAATA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCAAATAAAATGCCCACCCAAAGAAATCTGTGTGTTTGAAGAATA  793

seq1  TGGAAAGAAATAGTAAGAAATCCTTTAGTTCATACTTTACTAATATAAAT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGAAATAGTAAGAAATCCTTTAGTTCATACTTTACTAATATAAAT  843

seq1  TAGTGAAGATGGTACCTAGTTAGACACACTGTTTACCTACGGCGATTATA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAAGATGGTACCTAGTTAGACACACTGTTTACCTACGGCGATTATA  893

seq1  ATGTCAGATAAGACCAAATAACTTGTTCAGCAGCAAACTTTCATGGTTAT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGATAAGACCAAATAACTTGTTCAGCAGCAAACTTTCATGGTTAT  943

seq1  CAGATTTTACATGGGTTTTCCCCCATAAATAATTAGGGAGTGATTTAAAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTTACATGGGTTTTCCCCCATAAATAATTAGGGAGTGATTTAAAA  993

seq1  ACCCATTAAAAGACAATTAACTTCGATTCCAAGCAATTGTGTTTGGAATC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTAAAAGACAATTAACTTCGATTCCAAGCAATTGTGTTTGGAATC  1043

seq1  ACGCATTGGTGATGTAGAAATAAGAATAAAAACTCATGGAAAACTAGTTC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCATTGGTGATGTAGAAATAAGAATAAAAACTCATGGAAAACTAGTTC  1093

seq1  TTTAAAAATGATTTCTGGAAGTAGGAATTC  1122
      ||||||||||||||||||||||||||||||
seq2  TTTAAAAATGATTTCTGGAAGTAGGAATTC  1123