BAC Information

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BAC

Clone NameB6Ng01-267J06
Chromosome16 (Build37)
Map Location 52,578,479 - 52,579,527
singlet/doubletsinglet
Overlap genenone
Upstream geneCblb, Alcam
Downstream geneLOC100043430, LOC667895
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267J06.bB6Ng01-267J06.g
ACCGA070663GA070664
length7581,062
definitionB6Ng01-267J06.b B6Ng01-267J06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctatttagatctgcatatcatttggtttgttgatatctagttt
cttgagtcctttacatattttggaaagtagtcttccaccagatgtgggtt
tggggaagatcttctcctatgctgtaggctgccactttgtcctattgatg
gtaaagatacttttggagaggctttccagtttcatgagatcccatttatt
aatagtcaatcttaatgtctgagctattagtattctgttcaagaagatgt
ctcctgaaccaataaattcaaggttctttcctacttttatttctattaga
tttagtgtatacagttttatgttgaggtctttgatccatttggacttgag
ttttgtgtgggttgatagatatgaatctatttgcattcttctacattctg
gcatcaagttagagtagcaccatttgttgaagatgctttctttgtccatt
gtataattttggtttccttgtcagaaatcatgtatccataggtgccttac
tcagtgtttctattcctgcacaaacatcatgttggggaggaaagggttta
ttcagcttacacttccacattgctgttcatcaccaaaggaagtcaggatt
ggaactcaagcaggtcaggaagcaggagctgatgcagaggccatggagcg
atgttactttactggcttgcttcccatggcttgctaagcttgctggcttt
ttttaattattattttaatggatggtttctttatttacatttcatatgtt
atcttcct

gaattcaaagaagttctcagaagatggaaagatctcccatgctcatggat
tggcagacttaatatagtaaaaatggccatcttgctgaaatctacaaatt
caatgaagtccccatcaaattttaactcaattcttcatatctcaaattca
tttacaataacaagaagaaacaacaacaacaaaaccctcaggatagcaaa
aactattctcaacaataaaagaacttctggaggaatcaccatccctgacc
tcaaactgtactgcagaggaatagtgattaaaaactgcatggtattaata
caggcaggtaggtagacaatggaatagaattgaagacccagaaagaaaac
agccaaatggagatgtttaaaactgaactataaaggctaaggttgaggaa
cagtgtcattgtcaatgtaaatacagatatgaaaaatgaatttcaagaat
taaaagtgaaacaagtgatcttaagaaaagatgtgccattacaataatca
ttgccatctttagaataagaaaatccacagaatattaaaaagtagtatac
tttattcaataaagtggtttcagaaaattttaggttaagtagaaaattac
acatgaaaactcaacattaaattaccaagatatattttcccaacatgtga
acttaaatcacacacacacacacacacacacacacacacacaccaaaaaa
aaaaaaacccagtaagcgccttaaatacaaaggcagcctcctgaattcta
cttgtattcttgacaatgagtgacccagacacaaaaggatcagaacatat
gcagatagaccccaaggaagtacttttcttatcttaggaaggcacagtaa
aataccagaaagaacacatttgcttagaacattgaacaaattgatgtgca
cagaatgctgggaattttttataacaccatggtgataaccacgccagaag
ttgctcattctttccctgacattgcttcatgaccttctccacttgttaga
agaattgaacttgtctctcattaccacagcttgcttactagtaagctgct
ctgttggactat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_52578479_52579527
seq2: B6Ng01-267J06.g_67_1128 (reverse)

seq1  ATAGTCC-ACAGAGCAGC-TACTAGT-AGC-AGCTGT-GTAATGAGAGAC  45
      ||||||| |||||||||| ||||||| ||| |||||| ||||||||||||
seq2  ATAGTCCAACAGAGCAGCTTACTAGTAAGCAAGCTGTGGTAATGAGAGAC  50

seq1  -AGTTCAATTCTCTTAACAAGT-GAGA--GTCATGAAGCAAATGTCA-GG  90
       |||||||||||  |||||||| ||||  |||||||||| ||||||| ||
seq2  AAGTTCAATTCTTCTAACAAGTGGAGAAGGTCATGAAGC-AATGTCAGGG  99

seq1  AAAG-ATGAGCAACTTCTGGCGTGGTTATCACCATGGTGTTAT-AAAAAT  138
      |||| |||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAAGAATGAGCAACTTCTGGCGTGGTTATCACCATGGTGTTATAAAAAAT  149

seq1  TCCCAGCATTCTGTGCACATCAATTTGTTCAATGTTCTAAGC-AATGTGT  187
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCCCAGCATTCTGTGCACATCAATTTGTTCAATGTTCTAAGCAAATGTGT  199

seq1  TCTTTCTGGTATTGTACTGTGCCTTCCTAAGATAAG-AGAGTACTTCCTT  236
      ||||||||||||| |||||||||||||||||||||| | |||||||||||
seq2  TCTTTCTGGTATTTTACTGTGCCTTCCTAAGATAAGAAAAGTACTTCCTT  249

seq1  GGGGTCTATCTGCATATGTTCTGATCCTTTTGTGTCTGGGTCACTCATTG  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCTATCTGCATATGTTCTGATCCTTTTGTGTCTGGGTCACTCATTG  299

seq1  TCAAGAATACAAGTAGAATTCAGGAGGCTGCCTTTGTATTTAAGGCGCTT  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAATACAAGTAGAATTCAGGAGGCTGCCTTTGTATTTAAGGCGCTT  349

seq1  ACTGGGTTTTTTTTTTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTTTTTTTTTTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  399

seq1  GTGTGATTTAAGTTCACATGTTGGGAAAATATATCTTGGTAATTTAATGT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATTTAAGTTCACATGTTGGGAAAATATATCTTGGTAATTTAATGT  449

seq1  TGAGTTTTCATGTGTAATTTTCTACTTAACCTAAAATTTTCTGAAACCAC  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTCATGTGTAATTTTCTACTTAACCTAAAATTTTCTGAAACCAC  499

seq1  TTTATTGAATAAAGTATACTACTTTTTAATATTCTGTGGATTTTCTTATT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGAATAAAGTATACTACTTTTTAATATTCTGTGGATTTTCTTATT  549

seq1  CTAAAGATGGCAATGATTATTGTAATGGCACATCTTTTCTTAAGATCACT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGATGGCAATGATTATTGTAATGGCACATCTTTTCTTAAGATCACT  599

seq1  TGTTTCACTTTTAATTCTTGAAATTCATTTTTCATATCTGTATTTACATT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCACTTTTAATTCTTGAAATTCATTTTTCATATCTGTATTTACATT  649

seq1  GACAATGACACTGTTCCTCAACCTTAGCCTTTATAGTTCAGTTTTAAACA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGACACTGTTCCTCAACCTTAGCCTTTATAGTTCAGTTTTAAACA  699

seq1  TCTCCATTTGGCTGTTTTCTTTCTGGGTCTTCAATTCTATTCCATTGTCT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATTTGGCTGTTTTCTTTCTGGGTCTTCAATTCTATTCCATTGTCT  749

seq1  ACCTACCTGCCTGTATTAATACCATGCAGTTTTTAATCACTATTCCTCTG  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACCTGCCTGTATTAATACCATGCAGTTTTTAATCACTATTCCTCTG  799

seq1  CAGTACAGTTTGAGGTCAGGGATGGTGATTCCTCCAGAAGTTCTTTTATT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACAGTTTGAGGTCAGGGATGGTGATTCCTCCAGAAGTTCTTTTATT  849

seq1  GTTGAGAATAGTTTTTGCTATCCTGAGGGTTTTGTTGTTGTTGTTTCTTC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGAATAGTTTTTGCTATCCTGAGGGTTTTGTTGTTGTTGTTTCTTC  899

seq1  TTGTTATTGTAAATGAATTTGAGATATGAAGAATTGAGTTAAAATTTGAT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATTGTAAATGAATTTGAGATATGAAGAATTGAGTTAAAATTTGAT  949

seq1  GGGGACTTCATTGAATTTGTAGATTTCAGCAAGATGGCCATTTTTACTAT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTTCATTGAATTTGTAGATTTCAGCAAGATGGCCATTTTTACTAT  999

seq1  ATTAAGTCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTTCTGAGAA  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTTCTGAGAA  1049

seq1  CTTCTTTGAATTC  1049
      |||||||||||||
seq2  CTTCTTTGAATTC  1062


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