BAC Information

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BAC

Clone NameB6Ng01-267K22
Chromosome16 (Build37)
Map Location 12,603,070 - 12,604,193
singlet/doubletsinglet
Overlap genenone
Upstream gene4933437K13Rik, LOC100043171, C530044N13Rik, 2700045P11Rik
Downstream geneEG622509, LOC622553, Ercc4, Gt4-1, Mkl2, Parn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267K22.bB6Ng01-267K22.g
ACCGA070739GA070740
length1,1301,180
definitionB6Ng01-267K22.b B6Ng01-267K22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaacccacagggacatactattatgagttccttcttgctacaga
tgcagaattgattggtagcagcagagactttatggcccaaaagacccagg
tgatcttctacctggccctttgtagaaagatttggccaatgcataactca
gaaaatgaatctgtgccaccaggtctttaggggttgcttactgggtagca
ccaaagagaggcaagatggtgacttgttcttgttcacttggaaaatgacc
catatttattcctttctaatccactcagtgtcaggtacacttgttcctgc
tagaagaatcctgtaattgaaaattgaaaatgattctggaagactggagg
tacaagtcacacattgcacgtgtgaatgggcctgacacttacctgttgta
cgattcatcgcacttgatggtgtttcttttcccttgagaagagccaaaaa
atgagcaccatccagcattacaacagaacccatagccattctgacagaag
cctgagagtctaccctctcagttcctctgtcagactttacatggatacag
ttttgttgcttttcctagaaccagaacataccaatctactgtgagactgc
attttaaaaagatgttcttttgacagcatggatagagaaaaatctggcaa
ggccccacccctaaatgaagagctgcacagacaatggcttcctaaaggag
caagggccagttttcatcagggatgtttcccctaatcctaactgatctac
cctaaacacatgcacatgagaggaacactagctgttcacagtagaatatc
tgtatgcatttttctatattatattacaacaataattacagaagagttat
attgttagagaggagatgagaacagacatgggagtcattggaaaggggaa
agaaaggggtgaaatcatgcaaatgtagtgtactcatgtgttgaaattct
caaataagttaaaaaatatctcccttatatttcatgatgcccttaagggg
atgggctagtgtcactgtacccaaagccaaggcctggacattaagtatat
ttatctccaaagaagtcagtacatgtactgcatctgaacccagtcctggc
accacagggaaggaaaagaacggaaaggga
gaattctgggttaaaattttggagatgggtgggtggccccatccctcaac
tggggggggggcatgcctaacttctagatatggtcttgacaggttctcct
tcctttttgcgggttatttcagttaatgtcatccctgtggggtcctgaga
ggctcttgctttcttggcatctgggactttctggttgctactcccagttc
cccatcctccattgctacacacctctgttcaatttcctgaccttctgtac
atttcctatacctgattctgcccctcttttaccccttcctctcttccttc
caagtccctctcaccctctacttcccttgattctattgttcccccttcta
agtaggactgaaacatccactctttgttcttccttcctcttgagcttcct
gtggtctctgagttgtatgtgggtattctatagtctttgcctaaagcttt
ttatggaggcacttagtgctatgaattttcctcttagccctgctttcatt
gtgtcccataaaattgggtatgctgtcccataaaattgggtatgctgtgc
cttcattttcattgaattctaggaagtgtttaatttctttcactatttct
tctttgacccagagatcatgcatagagagttcgtcaatttccaccactgt
gtaagttttctggtgtttctatttttgttgttgtggtctgataagataca
aggagctatttcagttttcttgtatcttttgagaattgctttgtgattaa
ctatatggacaattttggggaaagttccatgaggtgctgaaaagaaggta
tattttgtgtttgggtgaaatattctatagatgtctattaggtctataat
aataatgtctgttagttttgttatttctctcttctgttttatgtggatga
cctctcaattggtcagagtaggatgttgaagtctcccacttattaatgta
tgtgggttcaatatgcaatttaagctttagcatgtttctttacaaatgtg
gtgcttttgtgtttgagcatagatgtcagaattgattatatcatctgagg
tttggtttgtttcctttcatgagttggagtgcctgcacagtccttttgat
attggttgagcctaatttatagctaagatgctaatcaagttgattcttgc
attatgatgtccggaaaaccctttgtctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_12603070_12604193
seq2: B6Ng01-267K22.b_43_1172

seq1  GAATTCAAACCCACAGGGACATACTATTATGAGTTCCTTCTTGCTACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACCCACAGGGACATACTATTATGAGTTCCTTCTTGCTACAGA  50

seq1  TGCAGAATTGATTGGTAGCAGCAGAGACTTTATGGCCCAAAAGACCCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAATTGATTGGTAGCAGCAGAGACTTTATGGCCCAAAAGACCCAGG  100

seq1  TGATCTTCTACCTGGCCCTTTGTAGAAAGATTTGGCCAATGCATAACTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTCTACCTGGCCCTTTGTAGAAAGATTTGGCCAATGCATAACTCA  150

seq1  GAAAATGAATCTGTGCCACCAGGTCTTTAGGGGTTGCTTACTGGGTAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGAATCTGTGCCACCAGGTCTTTAGGGGTTGCTTACTGGGTAGCA  200

seq1  CCAAAGAGAGGCAAGATGGTGACTTGTTCTTGTTCACTTGGAAAATGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAGAGGCAAGATGGTGACTTGTTCTTGTTCACTTGGAAAATGACC  250

seq1  CATATTTATTCCTTTCTAATCCACTCAGTGTCAGGTACACTTGTTCCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTATTCCTTTCTAATCCACTCAGTGTCAGGTACACTTGTTCCTGC  300

seq1  TAGAAGAATCCTGTAATTGAAAATTGAAAATGATTCTGGAAGACTGGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAATCCTGTAATTGAAAATTGAAAATGATTCTGGAAGACTGGAGG  350

seq1  TACAAGTCACACATTGCACGTGTGAATGGGCCTGACACTTACCTGTTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTCACACATTGCACGTGTGAATGGGCCTGACACTTACCTGTTGTA  400

seq1  CGATTCATCGCACTTGATGGTGTTTCTTTTCCCTTGAGAAGAGCCAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTCATCGCACTTGATGGTGTTTCTTTTCCCTTGAGAAGAGCCAAAAA  450

seq1  ATGAGCACCATCCAGCATTACAACAGAACCCATAGCCATTCTGACAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCACCATCCAGCATTACAACAGAACCCATAGCCATTCTGACAGAAG  500

seq1  CCTGAGAGTCTACCCTCTCAGTTCCTCTGTCAGACTTTACATGGATACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGAGTCTACCCTCTCAGTTCCTCTGTCAGACTTTACATGGATACAG  550

seq1  TTTTGTTGCTTTTCCTAGAACCAGAACATACCAATCTACTGTGAGACTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTGCTTTTCCTAGAACCAGAACATACCAATCTACTGTGAGACTGC  600

seq1  ATTTTAAAAAGATGTTCTTTTGACAGCATGGATAGAGAAAAATCTGGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAAAGATGTTCTTTTGACAGCATGGATAGAGAAAAATCTGGCAA  650

seq1  GGCCCCACCCCTAAATGAAGAGCTGCACAGACAATGGCTTCCTAAAGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCACCCCTAAATGAAGAGCTGCACAGACAATGGCTTCCTAAAGGAG  700

seq1  CAAGGGCCAGTTTTCATCAGGGATGTTTCCCCTAATCCTAACTGATCTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGCCAGTTTTCATCAGGGATGTTTCCCCTAATCCTAACTGATCTAC  750

seq1  CCTAAACACATGCACATGAGAGGAACACTAGCTGTTCACAGTAGAATATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAACACATGCACATGAGAGGAACACTAGCTGTTCACAGTAGAATATC  800

seq1  TGTATGCATTTTTCTATATTATATTACAACAATAATTACAGAAGAGTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCATTTTTCTATATTATATTACAACAATAATTACAGAAGAGTTAT  850

seq1  ATTGTTAGAGAGGAGATGAG-ACAGACATGGGAGTCATTGGAAAGGGGAA  899
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATTGTTAGAGAGGAGATGAGAACAGACATGGGAGTCATTGGAAAGGGGAA  900

seq1  AGAAAGGGGTGAAATCATGCAAATGTAGTGTACTCATGTG-TGAAATTCT  948
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGAAAGGGGTGAAATCATGCAAATGTAGTGTACTCATGTGTTGAAATTCT  950

seq1  CAAATAAGTT-AAAAATATCT-CCTTATATTTCATGATGCCCTTTAAAGG  996
      |||||||||| |||||||||| ||||||||||||||||||||||  ||||
seq2  CAAATAAGTTAAAAAATATCTCCCTTATATTTCATGATGCCCTT--AAGG  998

seq1  GGATGGGGCTAGTGTCACTGTACCCAAAGCCCAGGGCTGGACATAAAGTA  1046
      |||| |||||||||||||||||||||||||| ||| |||||||| |||||
seq2  GGAT-GGGCTAGTGTCACTGTACCCAAAGCCAAGGCCTGGACATTAAGTA  1047

seq1  TATTTATCTCC-AAGGAGTCAGTACATGTTACTGCATCTGAACCCCCAGT  1095
      ||||||||||| ||| |||||||||||| |||||||||||||  ||||||
seq2  TATTTATCTCCAAAGAAGTCAGTACATG-TACTGCATCTGAA--CCCAGT  1094

seq1  CTTGGCA-CACAGGGAGGGAGA------GAAAGGGA  1124
      | ||||| |||||||| ||| |      ||||||||
seq2  CCTGGCACCACAGGGAAGGAAAAGAACGGAAAGGGA  1130