BAC Information

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BAC

Clone NameB6Ng01-267O22
Chromosome16 (Build37)
Map Location 23,573,960 - 23,706,026
singlet/doubletdoublet
Overlap geneRtp4
Upstream geneDgkg, LOC666459, Crygs, Tbccd1, Dnajb11, Ahsg, Fetub, Hrg, Kng2, LOC624311, LOC666486, LOC666489, Kng1, LOC666493, Eif4a2, Rfc4, Adipoq, LOC100043541, EG625835, BC106179, St6gal1, Rtp1, Masp1, LOC100043018
Downstream geneEG625969, LOC100043023, Sst, Rtp2, Bcl6, EG433009, LOC666580, LOC100043564, 1110054M08Rik, Lpp, A730098P11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267O22.bB6Ng01-267O22.g
ACCGA070926GA070927
length917478
definitionB6Ng01-267O22.b B6Ng01-267O22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,705,495 - 23,706,026)(23,573,960 - 23,574,443)
sequence
gaattcttttttttattagatattttctttatatacatttcaaatgctat
cccaaaagttccctataccctccctctgccctgctcccctacccacccac
tcctgcttcctgcccctggcattcccttgtactggggcatataaagtttg
caagaccaagggggctctcttcccagtgatggctgactaggccatcttct
gctacatatgcagctagagacacgagctctaggggtactggttaattcat
attgttgttccacctatagggttgcagaccccttcagctcctttggtgct
ttctctagcttctccattgggggccctgtgttccatcttatagatgacta
taagcatccacttctgtatttgccaagcactggcatagcatcatacggga
cagctataacagggtcccttcagcaaaatctttctggcatatgcaatagt
gtctggaggatagcatccttagtgaggtaatcacaaaagaagtcattaga
tatgcactcactgataagtggatattagcccagaaacatagaacacccaa
gatacaatttgcaaaacacaagaaaattaagaagagggaagaccaatggg
tggatacttcattcctccttggaatagggaacaaaatacccatgaaaaga
gtttcagagacaaagtttggagctaagacaaaaggatggactatccagcg
actaccccacctgggggatccatcccataatgagagtcatgaattcttaa
agttaggatagcagagtactttacctaattgacaaatatgatggactgga
tattaattgtatatcatattctatgtttttttacataattgttgtggttg
tactcaattatgtctgagagaagagattttttgatttttggttttttttt
gtggggggttgggtttt
ccactatattttttctgtcattagtgaagaaatctgaatacatcagccac
aaatcaaggccattctttaccccagtttgcattttatatatttgctccta
cttgatttcaaattcacaaagttgaattgaactttggggaaaattttgct
accaggtttatgtcacttccaagtgctagatgaatcatagacttttaaaa
aaattgaaatggggctccgagattaatgatactaacgtcctatgcatcac
cgtgcccaagtgtccctaagaggaggttgtatgactttgtgagtccttcc
agtggcagaaggattggaactacgtgaggtagtcattccatttgcgtccc
agctctgattcttactggtattaatagtgctattagtttcatccttgcac
taactgagctccagaaggaattttcgcattatactgcttggtttttcacg
aggctggtgggggtgggttgggggtaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_23705495_23706026
seq2: B6Ng01-267O22.b_431_964 (reverse)

seq1  AAAAACCAA-CCCCCAC-AAAAAAAACCAAAAATCAAAAAATCTCTTCTC  48
      |||| |||| ||||||| ||||||||||||||||||||||||||||||||
seq2  AAAACCCAACCCCCCACAAAAAAAAACCAAAAATCAAAAAATCTCTTCTC  50

seq1  TCAGACATAATTGAGTACAACCACAACAATTATGTAAAAAAACATAGAAT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACATAATTGAGTACAACCACAACAATTATGTAAAAAAACATAGAAT  100

seq1  ATGATATACAATTAATATCCAGTCCATCATATTTGTCAATTAGGTAAAGT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATACAATTAATATCCAGTCCATCATATTTGTCAATTAGGTAAAGT  150

seq1  ACTCTGCTATCCTAACTTTAAGAATTCATGACTCTCATTATGGGATGGAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCTATCCTAACTTTAAGAATTCATGACTCTCATTATGGGATGGAT  200

seq1  CCCCCAGGTGGGGTAGTCGCTGGATAGTCCATCCTTTTGTCTTAGCTCCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAGGTGGGGTAGTCGCTGGATAGTCCATCCTTTTGTCTTAGCTCCA  250

seq1  AACTTTGTCTCTGAAACTCTTTTCATGGGTATTTTGTTCCCTATTCCAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGTCTCTGAAACTCTTTTCATGGGTATTTTGTTCCCTATTCCAAG  300

seq1  GAGGAATGAAGTATCCACCCATTGGTCTTCCCTCTTCTTAATTTTCTTGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATGAAGTATCCACCCATTGGTCTTCCCTCTTCTTAATTTTCTTGT  350

seq1  GTTTTGCAAATTGTATCTTGGGTGTTCTATGTTTCTGGGCTAATATCCAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCAAATTGTATCTTGGGTGTTCTATGTTTCTGGGCTAATATCCAC  400

seq1  TTATCAGTGAGTGCATATCTAATGACTTCTTTTGTGATTACCTCACTAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGTGAGTGCATATCTAATGACTTCTTTTGTGATTACCTCACTAAG  450

seq1  GATGCTATCCTCCAGACACTATTGCATATGCCAGAAAGATTTTGCTGAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTATCCTCCAGACACTATTGCATATGCCAGAAAGATTTTGCTGAAG  500

seq1  GGACCCTGTTATAGCTGTCCCGTATGATGCTATG  532
      ||||||||||||||||||||||||||||||||||
seq2  GGACCCTGTTATAGCTGTCCCGTATGATGCTATG  534

seq1: chr16_23573960_23574443
seq2: B6Ng01-267O22.g_67_550

seq1  GAATTCCCACTATATTTTTTCTGTCATTAGTGAAGAAATCTGAATACATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACTATATTTTTTCTGTCATTAGTGAAGAAATCTGAATACATC  50

seq1  AGCCACAAATCAAGGCCATTCTTTACCCCAGTTTGCATTTTATATATTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACAAATCAAGGCCATTCTTTACCCCAGTTTGCATTTTATATATTTG  100

seq1  CTCCTACTTGATTTCAAATTCACAAAGTTGAATTGAACTTTGGGGAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACTTGATTTCAAATTCACAAAGTTGAATTGAACTTTGGGGAAAAT  150

seq1  TTTGCTACCAGGTTTATGTCACTTCCAAGTGCTAGATGAATCATAGACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTACCAGGTTTATGTCACTTCCAAGTGCTAGATGAATCATAGACTT  200

seq1  TTAAAAAAATTGAAATGGGGCTCCGAGATTAATGATACTAACGTCCTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAATTGAAATGGGGCTCCGAGATTAATGATACTAACGTCCTATG  250

seq1  CATCACCGTGCCCAAGTGTCCCTAAGAGGAGGTTGTATGACTTTGTGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCGTGCCCAAGTGTCCCTAAGAGGAGGTTGTATGACTTTGTGAGT  300

seq1  CCTTCCAGTGGCAGAAGGATTGGAACTACGTGAGGTAGTCATTCCATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCAGTGGCAGAAGGATTGGAACTACGTGAGGTAGTCATTCCATTTG  350

seq1  CGTCCCAGCTCTGATTCTTACTGGTATTAATAGTGCTATTAGTTTCATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCCAGCTCTGATTCTTACTGGTATTAATAGTGCTATTAGTTTCATCC  400

seq1  TTGCACTAACTGAGCTCCAGAAGGAATTTTCGCATTATACTGCTTGGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTAACTGAGCTCCAGAAGGAATTTTCGCATTATACTGCTTGGTTT  450

seq1  TTCACGAGGCTGGTGGGGGTGGGTTGGGGGTAGA  484
      ||||||||||||||||||||||||||||||||||
seq2  TTCACGAGGCTGGTGGGGGTGGGTTGGGGGTAGA  484