BAC Information

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BAC

Clone NameB6Ng01-268E01
Chromosome16 (Build37)
Map Location 58,720,229 - 58,720,845
singlet/doubletsinglet
Overlap genenone
Upstream geneCol8a1, LOC435480, LOC629342, LOC100043477, Dcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15
Downstream geneCldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884, Arl6, Epha6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268E01.bB6Ng01-268E01.g
ACCGA071159GA071160
length902617
definitionB6Ng01-268E01.b B6Ng01-268E01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtgagaaggttatctattcagtaacattcaaatttacttctag
tacaaacagtgaaactaggcattacaaagaatagagctagaatagctcag
ggctagtctgcagagtgattacataggactgtagccagtcttacccaaac
aagggaatacacaatggcctagctaataggtgggttttaccataaaaggg
ctaggaaatcctactgagacaagaaacttctctacagccaggcatagaag
ggctatattgcatattagaagcgagttggtgaattcttctgacaaatgga
gattctccacagatacttaaaagaacagccaaattacactcatagaagaa
tttatcaaggcccaggaaataggggggttgtggtattgcattattcatga
aaaagtctgctagagcagaaccccctggtgctagctttcacaaggctcaa
aggagtagcacaaattctgactagggtgtgaaatccttacctataattag
ctgaccctaagcagagctgttttatctttactgtaaatattacctggttc
ctgtaagtccttttgaagttattcctttgttttctgtcaggtaacttcaa
tgtactttgcctgctgtgacttcctacccctctgttttctgtattatata
agactggtgttcacattgtgacaatacattcagattctacacaacctttc
gcgttcattttgtctgtcattcgctggactccttgtccacctgcaactag
agatccgttctacacagacagtgaccaaaagggtctggggcaatggttct
ttacacaaaacagagaaaatgcatgcataaaaagctagcaagattcagac
agtttttacaactgagataagaatagccctatcagctccttgggtactgc
ac
gaattcaccaggggttgacctgcaggatgcctttccttccccgttgtccc
caactgtttgtaatgttcagtcacatcatggagggtatagtcttcactaa
atataggctgcagttcagagaaactaattaacagtttgacatttctggga
cagaaatccttcccactgggtaaactttaattatttaagagaataattca
ccaccaccccccaaatatttcaaaatagaactatatctgcatggaaaaga
atagttgtttaaaatggaatatttagacagtgtatctatatgtgcatata
ttgaaggactaatcacagaaatgttctctcattgtgccttagttgtaaca
ctaaactggctcagtcagaagttactgtgcatttgataacacaaaggctt
atttgggctaaggagtttttaaaatttatttttctctcatatattacatc
ctgatgccatgtgtctcttccatcctctttttctagtccctccctcaccc
ctccctccctccctccctccctccttccctccctcccctcctcctttctt
tcttcctctctttctctcgctctctgatccactccttctttctcccttaa
aaaagggcaggctttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58720229_58720845
seq2: B6Ng01-268E01.g_65_681

seq1  GAATTCACCAGGGGTTGACCTGCAGGATGCCTTTCCTTCCCCGTTGTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAGGGGTTGACCTGCAGGATGCCTTTCCTTCCCCGTTGTCCC  50

seq1  CAACTGTTTGTAATGTTCAGTCACATCATGGAGGGTATAGTCTTCACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTTTGTAATGTTCAGTCACATCATGGAGGGTATAGTCTTCACTAA  100

seq1  ATATAGGCTGCAGTTCAGAGAAACTAATTAACAGTTTGACATTTCTGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGGCTGCAGTTCAGAGAAACTAATTAACAGTTTGACATTTCTGGGA  150

seq1  CAGAAATCCTTCCCACTGGGTAAACTTTAATTATTTAAGAGAATAATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATCCTTCCCACTGGGTAAACTTTAATTATTTAAGAGAATAATTCA  200

seq1  CCACCACCCCCCAAATATTTCAAAATAGAACTATATCTGCATGGAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCCCCCAAATATTTCAAAATAGAACTATATCTGCATGGAAAAGA  250

seq1  ATAGTTGTTTAAAATGGAATATTTAGACAGTGTATCTATATGTGCATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTGTTTAAAATGGAATATTTAGACAGTGTATCTATATGTGCATATA  300

seq1  TTGAAGGACTAATCACAGAAATGTTCTCTCATTGTGCCTTAGTTGTAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGACTAATCACAGAAATGTTCTCTCATTGTGCCTTAGTTGTAACA  350

seq1  CTAAACTGGCTCAGTCAGAAGTTACTGTGCATTTGATAACACAAAGGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACTGGCTCAGTCAGAAGTTACTGTGCATTTGATAACACAAAGGCTT  400

seq1  ATTTGGGCTAAGGAGTTTTTAAAATTTATTTTTCTCTCATATATTACATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGCTAAGGAGTTTTTAAAATTTATTTTTCTCTCATATATTACATC  450

seq1  CTGATGCCATGTGTCTCTTCCATCCTCTTTTTCTAGTCCCTCCCTCACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGCCATGTGTCTCTTCCATCCTCTTTTTCTAGTCCCTCCCTCACCC  500

seq1  CTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCCTCCTCCTTCCCT  550
      |||||||||||||||||||||||||||||||||||||||||||||| | |
seq2  CTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCCTCCTCCTTTCTT  550

seq1  CCCTCCCCTCCTTCTCTTGCTCCCTGATCCACTCCTCCTTTTTCCTTCAA  600
       | ||| ||| |||||| |||| ||||||||||||| |||| ||| | ||
seq2  TCTTCCTCTCTTTCTCTCGCTCTCTGATCCACTCCTTCTTTCTCCCTTAA  600

seq1  AAAAGGGCAGGCCTTCC  617
      |||||||||||| ||||
seq2  AAAAGGGCAGGCTTTCC  617