BAC Information

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BAC

Clone NameB6Ng01-268J04
Chromosome16 (Build37)
Map Location 73,824,664 - 73,981,266
singlet/doubletdoublet
Overlap geneRobo2
Upstream geneRobo1, LOC100039310, LOC100039318, LOC100039326
Downstream geneLOC665042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268J04.bB6Ng01-268J04.g
ACCGA071395GA071396
length1,0801,060
definitionB6Ng01-268J04.b B6Ng01-268J04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,824,664 - 73,825,744)(73,980,193 - 73,981,266)
sequence
gaattccacatttatttaattatttctcttagtctcctcagtctaagatg
agtttcctctttttaaaaattgctatatatctgtagacattatgggttgt
tccaactggtgaatgtaagtggtatatgttggataatggctggagagcca
tcaaaaatcgtatagtccaaagacagtgtcatacagaaaagaatgatttg
agtgcaagtattgtgtgttaagaacctgagatcttaggatatgcacataa
ctgtgaaaggcaggcagcaaggctaagaaaatacttgtttcccaggataa
gaacatgaagctgacatgttgaaaaggtattcctaaacaaatagagaact
tggaaatataaagacatttcaagaatgaatttgagtatcttcctatcaag
tttaaactttctttgcataatgagttaatgggtataataatagtaattat
tctgtagttgcgtggccatttttttctggagtggcggtgaaacaccactc
tcctttgctatctctgtgatacgctgcatcttctcactctgtagaagcta
aatggaaatatccctttctcctcttgtactaatggtgccctgcagcacca
atagcaatatcctagacaatacattcctgctaaaatacagttattgtact
tgcaggaaagccttccttcctgaccttccccatgcatctttcaaatcggg
tactcgagactcacattaagtctgaaattacattcaattttccttgctgg
agaacgaggattgatttctgagcctgcagtcaggagcccagactcatatg
gtggggtcaagacctgaggcttaccagaaaaagacagacaccattgtaac
tcagattaggccctttctcattggcttccattttgtagcatggatagaaa
aaatagtagtaaaaacatagaaacaaaaccaaagcaaaaacatgggtaag
actagaggttgctagaagaaataagtctagatggtttgacaagcatatga
attttgtgtggaggccaccatggggaaatacccacaattctgactttggg
gctatatttgacaatgtcatggttccgaga
gaattcacatgtggattaaaaggcaatgtttaatatatgtgcatggtgaa
gcccaatttagcacaggaatggtgcagggccagacagacactgtcgacgg
agatgttaagagactggactgcacctgctggtgctgtagagaatttcctg
ccatggaattgaagaagcccattcaagggttactaggatgaccaagggtt
tcttccctagctggcaagagctttggtcctctatgattccataattcttt
cacagaataaaagataatgattaacattagtaaagttctcgagtgttaca
caagggaaaatgcctaaacaagcaagctttgaaagtgagatatttggacc
aaaatattcaatatattcttattttaaatatgtataaaaatattactaat
gagcaaagttcatttcctttttttttttttgtttctccaactttttctca
acattaaaacaataatgtaatggccattctatggatagagtcaataagac
tcaaaaagtatatagaaatggaatatatttcacactttatgctgaaaata
aacaccacactgtggtcttatcggaatggtttattaaggatttataacat
gcagttagagaagaccgcagagttgttcacagatcactggaaaccctaaa
tgttcatttaacctttgactccagtgtcatggaaacctgtggtcaccttt
tagacataacttccctgcaactgaatttctgctagccaggagattttcaa
ttactttattgatcagagtcattcaaggcaatgagctatttatttagata
gtagaggggaaagaaagggaaattctaattagttgacctttggttgtgtc
taatgatgtcagagataggacaataaaagcagttataagaattactggaa
attctgcatagctatttgacttgaaacagatatgctgcattaaaacttga
taccacacagtttagatgtatgaagtccaccttcctcctatatagcatta
ttataatgttttgtgcatggagttatttgaacccataaacctttctgtta
acctcatttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_73824664_73825744
seq2: B6Ng01-268J04.b_46_1125

seq1  GAATTCCACATTTATTTAATTATTTCTCTTAGTCTCCTCAGTCTAAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATTTATTTAATTATTTCTCTTAGTCTCCTCAGTCTAAGATG  50

seq1  AGTTTCCTCTTTTTAAAAATTGCTATATATCTGTAGACATTATGGGTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCTCTTTTTAAAAATTGCTATATATCTGTAGACATTATGGGTTGT  100

seq1  TCCAACTGGTGAATGTAAGTGGTATATGTTGGATAATGGCTGGAGAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTGGTGAATGTAAGTGGTATATGTTGGATAATGGCTGGAGAGCCA  150

seq1  TCAAAAATCGTATAGTCCAAAGACAGTGTCATACAGAAAAGAATGATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAATCGTATAGTCCAAAGACAGTGTCATACAGAAAAGAATGATTTG  200

seq1  AGTGCAAGTATTGTGTGTTAAGAACCTGAGATCTTAGGATATGCACATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAAGTATTGTGTGTTAAGAACCTGAGATCTTAGGATATGCACATAA  250

seq1  CTGTGAAAGGCAGGCAGCAAGGCTAAGAAAATACTTGTTTCCCAGGATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAAGGCAGGCAGCAAGGCTAAGAAAATACTTGTTTCCCAGGATAA  300

seq1  GAACATGAAGCTGACATGTTGAAAAGGTATTCCTAAACAAATAGAGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGAAGCTGACATGTTGAAAAGGTATTCCTAAACAAATAGAGAACT  350

seq1  TGGAAATATAAAGACATTTCAAGAATGAATTTGAGTATCTTCCTATCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATATAAAGACATTTCAAGAATGAATTTGAGTATCTTCCTATCAAG  400

seq1  TTTAAACTTTCTTTGCATAATGAGTTAATGGGTATAATAATAGTAATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTTTCTTTGCATAATGAGTTAATGGGTATAATAATAGTAATTAT  450

seq1  TCTGTAGTTGCGTGGCCATTTTTTTCTGGAGTGGCGGTGAAACACCACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGTTGCGTGGCCATTTTTTTCTGGAGTGGCGGTGAAACACCACTC  500

seq1  TCCTTTGCTATCTCTGTGATACGCTGCATCTTCTCACTCTGTAGAAGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGCTATCTCTGTGATACGCTGCATCTTCTCACTCTGTAGAAGCTA  550

seq1  AATGGAAATATCCCTTTCTCCTCTTGTACTAATGGTGCCCTGCAGCACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAATATCCCTTTCTCCTCTTGTACTAATGGTGCCCTGCAGCACCA  600

seq1  ATAGCAATATCCTAGACAATACATTCCTGCTAAAATACAGTTATTGTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAATATCCTAGACAATACATTCCTGCTAAAATACAGTTATTGTACT  650

seq1  TGCAGGAAAGCCTTCCTTCCTGACCTTCCCCATGCATCTTTCAAATCGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAAAGCCTTCCTTCCTGACCTTCCCCATGCATCTTTCAAATCGGG  700

seq1  TACTCGAGACTCACATTAAGTCTGAAATTACATTCAATTTTCCTTGCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCGAGACTCACATTAAGTCTGAAATTACATTCAATTTTCCTTGCTGG  750

seq1  AGAACGAGGATTGATTTCTGAGCCTGCAGTCAGGAGCCCAGACTCATATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACGAGGATTGATTTCTGAGCCTGCAGTCAGGAGCCCAGACTCATATG  800

seq1  GTGGGGTCAAGACCTGAGGCTTACCAGAAAAAGACAGACACCATTGTAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTCAAGACCTGAGGCTTACCAGAAAAAGACAGACACCATTGTAAC  850

seq1  TCAAGATTAGG-CCATTCTCATTGGCTTCCA-TTTGTAGCATGGATAGAA  898
      || |||||||| || |||||||||||||||| ||||||||||||||||||
seq2  TC-AGATTAGGCCCTTTCTCATTGGCTTCCATTTTGTAGCATGGATAGAA  899

seq1  AAAATAGTAGTAAAAACATAGAAACAAAA-CAAAGCAAAAACAT-GGTAA  946
      ||||||||||||||||||||||||||||| |||||||||||||| |||||
seq2  AAAATAGTAGTAAAAACATAGAAACAAAACCAAAGCAAAAACATGGGTAA  949

seq1  GACTAGAGGTTGCTAGAAGAAAT-AGTCTAGGATGGTTTTGACAAAGCAT  995
      ||||||||||||||||||||||| |||||| ||||| |||||| ||||||
seq2  GACTAGAGGTTGCTAGAAGAAATAAGTCTA-GATGG-TTTGAC-AAGCAT  996

seq1  AATGAATTTTGTGTGGAGGCCACATGGGGGAAATAACCACAA-TCTGACT  1044
       ||||||||||||||||||||||   ||||||||| |||||| |||||||
seq2  -ATGAATTTTGTGTGGAGGCCACCATGGGGAAATACCCACAATTCTGACT  1045

seq1  ATGGGGCTATAATTGACAAATGTCAATGGTTCGGAGA  1081
       |||||||||| ||||| |||||| ||||||| ||||
seq2  TTGGGGCTATATTTGAC-AATGTC-ATGGTTCCGAGA  1080

seq1: chr16_73980193_73981266
seq2: B6Ng01-268J04.g_65_1124 (reverse)

seq1  GAAATGAAAGTTTAACAGAAAGTTTTATGGGTTTTCAAATTAAACTCAAT  50
      ||||||  || ||||||||||| ||||||||  |||||||  ||||| ||
seq2  GAAATG--AGGTTAACAGAAAGGTTTATGGG--TTCAAAT--AACTCCAT  44

seq1  GCACAAAACATTATAAATAATGCTATAATTAAGGAAGAAAGTGGACCTTC  100
      |||||||||||||| ||||||||||||    |||| ||| ||||| ||||
seq2  GCACAAAACATTAT-AATAATGCTATA---TAGGAGGAAGGTGGA-CTTC  89

seq1  ATTACATTCTAAACTGTGT-GTATCAAGTTTTAAATGCAGCATATCTGTT  149
      | |||| |||||||||||| |||||||||||| |||||||||||||||||
seq2  A-TACA-TCTAAACTGTGTGGTATCAAGTTTT-AATGCAGCATATCTGTT  136

seq1  TCAAGTCAAATAGCTATGCAGAA-TTCCAGTAATTTCTTATAACCTGCTT  198
      ||||||||||||||||||||||| ||||||||| ||||||||| ||||||
seq2  TCAAGTCAAATAGCTATGCAGAATTTCCAGTAA-TTCTTATAA-CTGCTT  184

seq1  TTATTGTCCTATCTCTGACATCATTAGACACAACCAAAGGTCAACTAATT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTCCTATCTCTGACATCATTAGACACAACCAAAGGTCAACTAATT  234

seq1  AGAATTTCCCCTTCTTTCCCCTCTACTATCTAAATAAATAGCTCATTGCC  298
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCCCTTTCTTTCCCCTCTACTATCTAAATAAATAGCTCATTGCC  284

seq1  TTGAATGACTCTGATCAATAAAGTAATTGAAAATCTCCTGGCTAGCAGAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGACTCTGATCAATAAAGTAATTGAAAATCTCCTGGCTAGCAGAA  334

seq1  ATTCAGTTGCAGGGAAGTTATGTCTAAAAGGTGACCACAGGTTTCCATGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTTGCAGGGAAGTTATGTCTAAAAGGTGACCACAGGTTTCCATGA  384

seq1  CACTGGAGTCAAAGGTTAAATGAACATTTAGGGTTTCCAGTGATCTGTGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAGTCAAAGGTTAAATGAACATTTAGGGTTTCCAGTGATCTGTGA  434

seq1  ACAACTCTGCGGTCTTCTCTAACTGCATGTTATAAATCCTTAATAAACCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTCTGCGGTCTTCTCTAACTGCATGTTATAAATCCTTAATAAACCA  484

seq1  TTCCGATAAGACCACAGTGTGGTGTTTATTTTCAGCATAAAGTGTGAAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGATAAGACCACAGTGTGGTGTTTATTTTCAGCATAAAGTGTGAAAT  534

seq1  ATATTCCATTTCTATATACTTTTTGAGTCTTATTGACTCTATCCATAGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCATTTCTATATACTTTTTGAGTCTTATTGACTCTATCCATAGAA  584

seq1  TGGCCATTACATTATTGTTTTAATGTTGAGAAAAAGTTGGAGAAACAAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCATTACATTATTGTTTTAATGTTGAGAAAAAGTTGGAGAAACAAAA  634

seq1  AAAAAAAAAGGAAATGAACTTTGCTCATTAGTAATATTTTTATACATATT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGGAAATGAACTTTGCTCATTAGTAATATTTTTATACATATT  684

seq1  TAAAATAAGAATATATTGAATATTTTGGTCCAAATATCTCACTTTCAAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAGAATATATTGAATATTTTGGTCCAAATATCTCACTTTCAAAG  734

seq1  CTTGCTTGTTTAGGCATTTTCCCTTGTGTAACACTCGAGAACTTTACTAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTGTTTAGGCATTTTCCCTTGTGTAACACTCGAGAACTTTACTAA  784

seq1  TGTTAATCATTATCTTTTATTCTGTGAAAGAATTATGGAATCATAGAGGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATCATTATCTTTTATTCTGTGAAAGAATTATGGAATCATAGAGGA  834

seq1  CCAAAGCTCTTGCCAGCTAGGGAAGAAACCCTTGGTCATCCTAGTAACCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCTCTTGCCAGCTAGGGAAGAAACCCTTGGTCATCCTAGTAACCC  884

seq1  TTGAATGGGCTTCTTCAATTCCATGGCAGGAAATTCTCTACAGCACCAGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGGGCTTCTTCAATTCCATGGCAGGAAATTCTCTACAGCACCAGC  934

seq1  AGGTGCAGTCCAGTCTCTTAACATCTCCGTCGACAGTGTCTGTCTGGCCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCAGTCCAGTCTCTTAACATCTCCGTCGACAGTGTCTGTCTGGCCC  984

seq1  TGCACCATTCCTGTGCTAAATTGGGCTTCACCATGCACATATATTAAACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCATTCCTGTGCTAAATTGGGCTTCACCATGCACATATATTAAACA  1034

seq1  TTGCCTTTTAATCCACATGTGAATTC  1074
      ||||||||||||||||||||||||||
seq2  TTGCCTTTTAATCCACATGTGAATTC  1060