BAC Information

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BAC

Clone NameB6Ng01-268L04
Chromosome16 (Build37)
Map Location 12,813,321 - 12,814,283
singlet/doubletsinglet
Overlap genenone
Upstream geneC530044N13Rik, 2700045P11Rik, EG622509
Downstream geneLOC622553, Ercc4, Gt4-1, Mkl2, Parn, LOC100043196, 3110001I22Rik, Pla2g10, A930007A09Rik, LOC622757, Rrn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268L04.bB6Ng01-268L04.g
ACCGA071487GA071488
length250961
definitionB6Ng01-268L04.b B6Ng01-268L04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cagattgctacgaagcactagtgtaacacagaaatgacactttgttaacc
cttccttggtgggtgagacattaatcccaactgtttaggcagggtggttg
taagtttgaaagctgtctgtgctacagaatgagttctgggctaacctggg
caaatgagtgaaactcttcttttaaaaaaaaagctggtgagatgtctttg
agagcaaaggtactttttgccaagcctgatgaccagagtcagggagagga


gaattcaatactaaatttcaccctagtctgcttaacaactaaataaagaa
tataaatgattcattattaaatcttagtgtctttaggcaaaataattatt
catgagacataaaatgtctgctgctgaaacaaaggaaaatgtcctatacc
atgtgcccatacaaagtgatttttttttaaaatgaagcaatctgaaaacc
attcacataagtgaaacaataaatttagttttcataattcattgtgaaaa
ggtttattatgcatctattatgttccaggagccatgtggtccttaggcca
gctaaacaatgatgaataagaatatataaaatttctgttctcccagattt
tatcttacaaataagcagatagaggtcaataaagcagtggggtgtgcaga
agcacaacaaagcagagagacatacagagaagaacgacacagtgagtaaa
cctggacccaggggaagagaaagttggtttgacttgagaactgaaggctt
ggatttttctaggcgaaaagaagagggaaggatgcttcaagaagaaaatg
tggcatgtgactctgttccacgacaggctgcagtagctcattcaaattgg
ctaaaatcaaaaggcactacattttagaaaatctgaagtttaaattacta
atagtttacaactgtattgcacaatggaccctttgatggagtctcaagtc
tggttttaaggaccaggaaccaggacatcgacagtcactgagtctacaac
agtggaaggaagaagtaatgcagcagtagttggaccacaaagcagtctgt
ttcatcaagtgagaaacacaccggtctttcattttgagaatcacatctga
caacagagggagaactaggtagagggtggtatggggaccatggggttgca
acctgtaaatctacatgagcaataatagcacttctgcctgtgaggtgagg
gttgagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_12813321_12814283
seq2: B6Ng01-268L04.g_65_1025

seq1  GAATTCAATACTAAATTTCACCCTAGTCTGCTTAACAACTAAATAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATACTAAATTTCACCCTAGTCTGCTTAACAACTAAATAAAGAA  50

seq1  TATAAATGATTCATTATTAAATCTTAGTGTCTTTAGGCAAAATAATTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATGATTCATTATTAAATCTTAGTGTCTTTAGGCAAAATAATTATT  100

seq1  CATGAGACATAAAATGTCTGCTGCTGAAACAAAGGAAAATGTCCTATACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGACATAAAATGTCTGCTGCTGAAACAAAGGAAAATGTCCTATACC  150

seq1  ATGTGCCCATACAAAGTGATTTTTTTTTAAAATGAAGCAATCTGAAAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCCCATACAAAGTGATTTTTTTTTAAAATGAAGCAATCTGAAAACC  200

seq1  ATTCACATAAGTGAAACAATAAATTTAGTTTTCATAATTCATTGTGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACATAAGTGAAACAATAAATTTAGTTTTCATAATTCATTGTGAAAA  250

seq1  GGTTTATTATGCATCTATTATGTTCCAGGAGCCATGTGGTCCTTAGGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATTATGCATCTATTATGTTCCAGGAGCCATGTGGTCCTTAGGCCA  300

seq1  GCTAAACAATGATGAATAAGAATATATAAAATTTCTGTTCTCCCAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAACAATGATGAATAAGAATATATAAAATTTCTGTTCTCCCAGATTT  350

seq1  TATCTTACAAATAAGCAGATAGAGGTCAATAAAGCAGTGGGGTGTGCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTACAAATAAGCAGATAGAGGTCAATAAAGCAGTGGGGTGTGCAGA  400

seq1  AGCACAACAAAGCAGAGAGACATACAGAGAAGAACGACACAGTGAGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAACAAAGCAGAGAGACATACAGAGAAGAACGACACAGTGAGTAAA  450

seq1  CCTGGACCCAGGGGAAGAGAAAGTTGGTTTGACTTGAGAACTGAAGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACCCAGGGGAAGAGAAAGTTGGTTTGACTTGAGAACTGAAGGCTT  500

seq1  GGATTTTTCTAGGCGAAAAGAAGAGGGAAGGATGCTTCAAGAAGAAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTTCTAGGCGAAAAGAAGAGGGAAGGATGCTTCAAGAAGAAAATG  550

seq1  TGGCATGTGACTCTGTTCCACGACAGGCTGCAGTAGCTCATTCAAATTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGTGACTCTGTTCCACGACAGGCTGCAGTAGCTCATTCAAATTGG  600

seq1  CTAAAATCAAAAGGCACTACATTTTAGAAAATCTGAAGTTTAAATTACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATCAAAAGGCACTACATTTTAGAAAATCTGAAGTTTAAATTACTA  650

seq1  ATAGTTTACAACTGTATTGCACAATGGACCCTTTGATGGAGTCTCAAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTACAACTGTATTGCACAATGGACCCTTTGATGGAGTCTCAAGTC  700

seq1  TGGTTTTAAGGACCAGGAACCAGGACATCGACAGTCACTGAGTCTACAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTAAGGACCAGGAACCAGGACATCGACAGTCACTGAGTCTACAAC  750

seq1  AGTGGAAGGAAGAAGTAATGCAGGCAGTAGTTGGACCACAAAGCAGTCTG  800
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGTGGAAGGAAGAAGTAATGCA-GCAGTAGTTGGACCACAAAGCAGTCTG  799

seq1  TTTCATCAAGTGAGAAACACACCGGTCTTTCATTTTGAGAATCACATCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCAAGTGAGAAACACACCGGTCTTTCATTTTGAGAATCACATCTG  849

seq1  ACAACAGAGGGAGAACTAGGTAGAGGGTGGTATGGGGACCATGGGGTTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGAGGGAGAACTAGGTAGAGGGTGGTATGGGGACCATGGGGTTGC  899

seq1  AACCTGTAAATCTACATGAGCAATAATAGCACTTCTGCCTGTGGAGGTGA  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AACCTGTAAATCTACATGAGCAATAATAGCACTTCTGCCTGT-GAGGTGA  948

seq1  GGGTTGAGGGAGG  963
      |||||||||||||
seq2  GGGTTGAGGGAGG  961


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