BAC Information

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BAC

Clone NameB6Ng01-272G07
Chromosome16 (Build37)
Map Location 67,868,592 - 67,989,095
singlet/doubletdoublet
Overlap genenone
Upstream geneCadm2, 9330155M09Rik
Downstream geneEG626609
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272G07.bB6Ng01-272G07.g
ACCGA074233GA074234
length1,0001,185
definitionB6Ng01-272G07.b B6Ng01-272G07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,868,592 - 67,869,581)(67,987,902 - 67,989,095)
sequence
gaattcccatttgtctattgattttagaacctgagccattgctgttctat
tcagaaaaatatttcccctgttctgttgtatttaaagctctttcccactc
tcttctattagattcatataggcttataccaatattgtaataaaaaaggt
tcatcagttcaacttcagaagtccccatagtctaccaacgtctcaacact
gtgtaagaatccaaagttcaaagtttcttctgagacttatatcagtctct
taactggaagcctctataaaattgatataaaaaaacaggtcacctatgcc
cagcataccatggaacagaagagatattactgtttttaaatgaggaaagg
aatatagtgaatttaatctcagaagtaatgattacacaatgaaatgtttt
gtatgtttgttggttttcctacacacattcatgtgtgttttagtatgtgc
tgaggaggaagcatcagtttgtgttaactgatactgtgtgtgacccaccg
agtttcaatatgtttgcctgcatattatgatgagtgattcactaaagcaa
ggtaacatatctgtgaccatgcattgaaaattggcatgcctcttgcccgc
agccattaggtgtcactagtccctcagagaagaatggggtatcatgagct
cttcccactttcaccatacaatgctgatgagctggacttgtgtagggctt
atggaactaacctgggagatggagaattcataagtgcatcagccagctaa
tttccagaagaaaatgttgcatagtagttgtcttagtcagggtttctatt
cctgaacaaacatcatgaccaagaagcagttggggaggaaagagtttatt
cggcttatacttccatactgctgttcttcaccaaggaaaataggactgga
actcaagcagtcaggaagctggagctgatgcagaggccatggaaagatgt
tctttactggcttgcttccctggcttgctcagcctgctttctgtagaacc


gaattctatgttgttgtaggtttcaaatggaattgcaagagtctatactt
ataaaaacagataatgtatacttaaaacgtatggttcatgatgttaaaat
agagaaaacaatgaaaaaaactgtattagagatgaactgggaactcttcc
tactctctgggtgttttcttttaggggaatgataagtgcacaaggtattt
atttgaaaaatacaatactcttggggatgaaatactatcttttttatgtg
ccaattacacaaaaaataaaactcaacactacaaacaaaataattttctt
ttctctctgggagcattagaggtttgagctttagtattagaaaactctga
gaattttctcttttacctgtaatacaatattccatactcaatatgtgtac
caacttaataagcaacaattaagaaaaaaacatggaatttttgatgtctc
ttttcaaatactaaatttatttgcttgaatcagttttattgtcttggtat
tagaagttttttttgtttttgtttttgttttgttttgttttttttgtttt
tttgtcaacggttcttctgttatttataagatcccaaactaaacaaaaca
cttatttttctaggaacttctgagagtataaagacaaaacaagaagtacc
ttttccaaggtatcactagcagaggtaagtgttgatatgaaaatgctcta
aggagacagaaatgccccaaagagctgtgcatgagctgctctgggaaatc
ctgagtccatgttttaaaaatcacgtatactgccaacgttcccttgctaa
aagtctagcgcagaagtaatgagaatcagtagacctgaaagataaaaagt
caggtatcttcatgtaacagaaaaatcaaaagcttggcagtgcaccacat
ctgggaccttcaaagaattctagaggaagaaaaacacatactattaaaat
aaagtgtttcatatccaagttttacaaagtgagaagcaattataaataaa
tttcagctagctatatacctacctctcaaaggatcacacagtacaaaaat
agatccatagtacattcagaacagtgctggattttaaaatgccacataaa
gaattcacatatcttctagtaaaacgttatttctcccaatagtgagtaat
acaggttctatactagccgagaacaaaaatgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_67868592_67869581
seq2: B6Ng01-272G07.b_46_1033

seq1  GAATTCCCATTTGTCTATTGATTTTAGAACCTGAGCCATTGCTGTTCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTTGTCTATTGATTTTAGAACCTGAGCCATTGCTGTTCTAT  50

seq1  TCAGAAAAATATTTCCCCTGTTCTGTTGTATTTAAAGCTCTTTCCCACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAAATATTTCCCCTGTTCTGTTGTATTTAAAGCTCTTTCCCACTC  100

seq1  TCTTCTATTAGATTCATATAGGCTTATACCAATATTGTAATAAAAAAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTATTAGATTCATATAGGCTTATACCAATATTGTAATAAAAAAGGT  150

seq1  TCATCAGTTCAACTTCAGAAGTCCCCATAGTCTACCAACGTCTCAACACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGTTCAACTTCAGAAGTCCCCATAGTCTACCAACGTCTCAACACT  200

seq1  GTGTAAGAATCCAAAGTTCAAAGTTTCTTCTGAGACTTATATCAGTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGAATCCAAAGTTCAAAGTTTCTTCTGAGACTTATATCAGTCTCT  250

seq1  TAACTGGAAGCCTCTATAAAATTGATATAAAAAAACAGGTCACCTATGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGAAGCCTCTATAAAATTGATATAAAAAAACAGGTCACCTATGCC  300

seq1  CAGCATACCATGGAACAGAAGAGATATTACTGTTTTTAAATGAGGAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATACCATGGAACAGAAGAGATATTACTGTTTTTAAATGAGGAAAGG  350

seq1  AATATAGTGAATTTAATCTCAGAAGTAATGATTACACAATGAAATGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGTGAATTTAATCTCAGAAGTAATGATTACACAATGAAATGTTTT  400

seq1  GTATGTTTGTTGGTTTTCCTACACACATTCATGTGTGTTTTAGTATGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTTGTTGGTTTTCCTACACACATTCATGTGTGTTTTAGTATGTGC  450

seq1  TGAGGAGGAAGCATCAGTTTGTGTTAACTGATACTGTGTGTGACCCACCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGGAAGCATCAGTTTGTGTTAACTGATACTGTGTGTGACCCACCG  500

seq1  AGTTTCAATATGTTTGCCTGCATATTATGATGAGTGATTCACTAAAGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAATATGTTTGCCTGCATATTATGATGAGTGATTCACTAAAGCAA  550

seq1  GGTAACATATCTGTGACCATGCATTGAAAATTGGCATGCCTCTTGCCCGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACATATCTGTGACCATGCATTGAAAATTGGCATGCCTCTTGCCCGC  600

seq1  AGCCATTAGGTGTCACTAGTCCCTCAGAGAAGAATGGGGTATCATGAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTAGGTGTCACTAGTCCCTCAGAGAAGAATGGGGTATCATGAGCT  650

seq1  CTTCCCACTTTCACCATACAATGCTGATGAGCTGGACTTGTGTAGGGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCACTTTCACCATACAATGCTGATGAGCTGGACTTGTGTAGGGCTT  700

seq1  ATGGAACTAACCTGGGAGATGGAGAATTCATAAGTGCATCAGCCAGCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACTAACCTGGGAGATGGAGAATTCATAAGTGCATCAGCCAGCTAA  750

seq1  TTTCCAGAAGAAAATGTTGCATAGTAGTTGTCTTAGTCAGGGTTTCTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGAAGAAAATGTTGCATAGTAGTTGTCTTAGTCAGGGTTTCTATT  800

seq1  CCTGAACAAACATCATGACCAAGAAGCAGTTGGGGAGGAAAGAGTTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACAAACATCATGACCAAGAAGCAGTTGGGGAGGAAAGAGTTTATT  850

seq1  CGGCTTATACTTCCATACTGCTGTTCTTCACCAAGGAAAATAGGACTGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTATACTTCCATACTGCTGTTCTTCACCAAGGAAAATAGGACTGGA  900

seq1  ACTCAAGCAGGTCAGGAAGCTGGAGCTGATGCAGAGGCCATGGAAGGATG  950
      ||||||||| ||||||||||||||||||||||||||||||||||| ||||
seq2  ACTCAAGCA-GTCAGGAAGCTGGAGCTGATGCAGAGGCCATGGAAAGATG  949

seq1  TTCTTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCCTGCT  990
      |||||||||||||||||| |||||||||||||||||||||
seq2  TTCTTTACTGGCTTGCTT-CCCTGGCTTGCTCAGCCTGCT  988


seq1: chr16_67987902_67989095
seq2: B6Ng01-272G07.g_65_1249 (reverse)

seq1  AAAACATTTTTG-TCTCTGCTAAGATATAAGAACATGTATATACTCACTA  49
      |||||||||||| |||| ||||  ||   ||||| ||||| |||||||||
seq2  AAAACATTTTTGTTCTCGGCTAGTAT---AGAACCTGTAT-TACTCACTA  46

seq1  TATGTGAGAAATAATGTTTTTACTAGAAGATATGTGAA-TCTTTATGTGC  98
      | || ||||||||| | ||||||||||||||||||||| |||||||||| 
seq2  T-TGGGAGAAATAACG-TTTTACTAGAAGATATGTGAATTCTTTATGTGG  94

seq1  ATTTTTAAAATTCCAGCACTTGTTCTGAATGTACCTATGGATCTA-TTTT  147
        |||||||| |||||||| ||||||||||||| ||||||||||| ||||
seq2  CATTTTAAAA-TCCAGCAC-TGTTCTGAATGTA-CTATGGATCTATTTTT  141

seq1  GTACCTGTGTTGATCCTTTTGAGAGGTAGGTATATAGCTAGCTGAAATTT  197
      ||| ||||| |||||| |||||||||||||||||||||||||||||||||
seq2  GTA-CTGTG-TGATCC-TTTGAGAGGTAGGTATATAGCTAGCTGAAATTT  188

seq1  ATTTATAATTGCTTCTCACTTTGTAAAACTTGGATATGAAACACTTTATT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAATTGCTTCTCACTTTGTAAAACTTGGATATGAAACACTTTATT  238

seq1  TTAATAGTATGTGTTTTTCTTCCTCTAGAATTCTTTGAAGGTCCCAGATG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAGTATGTGTTTTTCTTCCTCTAGAATTCTTTGAAGGTCCCAGATG  288

seq1  TGGTGCACTGCCAAGCTTTTGATTTTTCTGTTACATGAAGATACCTGACT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCACTGCCAAGCTTTTGATTTTTCTGTTACATGAAGATACCTGACT  338

seq1  TTTTATCTTTCAGGTCTACTGATTCTCATTACTTCTGCGCTAGACTTTTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCTTTCAGGTCTACTGATTCTCATTACTTCTGCGCTAGACTTTTA  388

seq1  GCAAGGGAACGTTGGCAGTATACGTGATTTTTAAAACATGGACTCAGGAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGGAACGTTGGCAGTATACGTGATTTTTAAAACATGGACTCAGGAT  438

seq1  TTCCCAGAGCAGCTCATGCACAGCTCTTTGGGGCATTTCTGTCTCCTTAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGAGCAGCTCATGCACAGCTCTTTGGGGCATTTCTGTCTCCTTAG  488

seq1  AGCATTTTCATATCAACACTTACCTCTGCTAGTGATACCTTGGAAAAGGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTCATATCAACACTTACCTCTGCTAGTGATACCTTGGAAAAGGT  538

seq1  ACTTCTTGTTTTGTCTTTATACTCTCAGAAGTTCCTAGAAAAATAAGTGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTGTTTTGTCTTTATACTCTCAGAAGTTCCTAGAAAAATAAGTGT  588

seq1  TTTGTTTAGTTTGGGATCTTATAAATAACAGAAGAACCGTTGACAAAAAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTAGTTTGGGATCTTATAAATAACAGAAGAACCGTTGACAAAAAA  638

seq1  ACAAAAAAAACAAAACAAAACAAAAACAAAAACAAAAAAAACTTCTAATA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAAACAAAACAAAACAAAAACAAAAACAAAAAAAACTTCTAATA  688

seq1  CCAAGACAATAAAACTGATTCAAGCAAATAAATTTAGTATTTGAAAAGAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGACAATAAAACTGATTCAAGCAAATAAATTTAGTATTTGAAAAGAG  738

seq1  ACATCAAAAATTCCATGTTTTTTTCTTAATTGTTGCTTATTAAGTTGGTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAAAATTCCATGTTTTTTTCTTAATTGTTGCTTATTAAGTTGGTA  788

seq1  CACATATTGAGTATGGAATATTGTATTACAGGTAAAAGAGAAAATTCTCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATTGAGTATGGAATATTGTATTACAGGTAAAAGAGAAAATTCTCA  838

seq1  GAGTTTTCTAATACTAAAGCTCAAACCTCTAATGCTCCCAGAGAGAAAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTCTAATACTAAAGCTCAAACCTCTAATGCTCCCAGAGAGAAAAG  888

seq1  AAAATTATTTTGTTTGTAGTGTTGAGTTTTATTTTTTGTGTAATTGGCAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATTTTGTTTGTAGTGTTGAGTTTTATTTTTTGTGTAATTGGCAC  938

seq1  ATAAAAAAGATAGTATTTCATCCCCAAGAGTATTGTATTTTTCAAATAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAGATAGTATTTCATCCCCAAGAGTATTGTATTTTTCAAATAAA  988

seq1  TACCTTGTGCACTTATCATTCCCCTAAAAGAAAACACCCAGAGAGTAGGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTGTGCACTTATCATTCCCCTAAAAGAAAACACCCAGAGAGTAGGA  1038

seq1  AGAGTTCCCAGTTCATCTCTAATACAGTTTTTTTCATTGTTTTCTCTATT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCCCAGTTCATCTCTAATACAGTTTTTTTCATTGTTTTCTCTATT  1088

seq1  TTAACATCATGAACCATACGTTTTAAGTATACATTATCTGTTTTTATAAG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATCATGAACCATACGTTTTAAGTATACATTATCTGTTTTTATAAG  1138

seq1  TATAGACTCTTGCAATTCCATTTGAAACCTACAACAACATAGAATTC  1194
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGACTCTTGCAATTCCATTTGAAACCTACAACAACATAGAATTC  1185


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