BAC Information

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BAC

Clone NameB6Ng01-273D22
Chromosome16 (Build37)
Map Location 78,767,391 - 78,767,789
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435483, LOC100039561, Cxadr, Btg3, D16Ertd472e, LOC100039605, 4930570E03Rik
Downstream geneChodl, Prss7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273D22.bB6Ng01-273D22.g
ACCGA074867GA074868
length1,189393
definitionB6Ng01-273D22.b B6Ng01-273D22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttggtt
ttctgaagtccaccttcttaagttctttatatatgttggatgttagtccc
ctatctgatttaggataggtaatgatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtccccatttgtcaattctcgatcttacagcacaagccattgctgt
tctgttcaggaatttttcccctgtgcccatatcttcaaggcttttcccca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttctttg
atccatttagatttgaccttagtacaaggagataagtatgaatcgattca
cattcttctacatgataacaaccagttgtgccagcaccaattgttgaaaa
tgctgtcttttttccactggatggtttttgctcccttgtcgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgtctctataccagtaccatgcagtttttaccacaattg
ctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaagagttttggctatcctaggttttttgttattccagat
gaatttgcaaattgctccttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagaatgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttctatct
tctgagatcttctttaatttctttcttcagagacttgaagtttttatcat
acagatctttcacttccttagttagagtcacgccgagatattttatatta
tttgtgactattgagaagggtgttgtttccctatttctttctcagcctgt
ttattctttctgcaataaggcattgacttgttgagtttatttttatatca
gctacttcaccggaagctgtttatcagttagggagttcctctggtgattt
ttaggtcacttatatatacttattcatatcaatcttggcaaggcatattt
gactcttcttccaactggaattccctgataattctccct

tgtgtatacccactgatgatcttgcaatcaatttcttatgttttcttttt
atttttctgaaaatttaaaagagagattgcttttcattaattggtttatt
ctctttacaccaaaatcatagcccccttccctccttccttcctcctccca
gccccacccttacaattctctgttcctcaccccccacctcccactggtac
caatctaccatggcacatcaagtcacatcagaattaagcactgcttctcc
caccgaggccagacaagggatctcagctacaggaaagggaatacaaaggc
aggcaacagagtctaagtcagagatagtccctactccaattcttagggga
ccctcatgaagctacacatctgctacatatgtgtagggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_78767391_78767789
seq2: B6Ng01-273D22.g_66_464

seq1  GAATTCTGTGTATACCCACTGATGATCTTGCAATCAATTTCTTATGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTATACCCACTGATGATCTTGCAATCAATTTCTTATGTTTT  50

seq1  CTTTTTATTTTTCTGAAAATTTAAAAGAGAGATTGCTTTTCATTAATTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATTTTTCTGAAAATTTAAAAGAGAGATTGCTTTTCATTAATTGG  100

seq1  TTTATTCTCTTTACACCAAAATCATAGCCCCCTTCCCTCCTTCCTTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTCTTTACACCAAAATCATAGCCCCCTTCCCTCCTTCCTTCCTC  150

seq1  CTCCCAGCCCCACCCTTACAATTCTCTGTTCCTCACCCCCCACCTCCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAGCCCCACCCTTACAATTCTCTGTTCCTCACCCCCCACCTCCCAC  200

seq1  TGGTACCAATCTACCATGGCACATCAAGTCACATCAGAATTAAGCACTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACCAATCTACCATGGCACATCAAGTCACATCAGAATTAAGCACTGC  250

seq1  TTCTCCCACCGAGGCCAGACAAGGGATCTCAGCTACAGGAAAGGGAATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCACCGAGGCCAGACAAGGGATCTCAGCTACAGGAAAGGGAATAC  300

seq1  AAAGGCAGGCAACAGAGTCTAAGTCAGAGATAGTCCCTACTCCAATTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAGGCAACAGAGTCTAAGTCAGAGATAGTCCCTACTCCAATTCTT  350

seq1  AGGGGACCCTCATGAAGCTACACATCTGCTACATATGTGTAGGGGGGGG  399
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGACCCTCATGAAGCTACACATCTGCTACATATGTGTAGGGGGGGG  399


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