BAC Information

Click to search

BAC

Clone NameB6Ng01-273E10
Chromosome16 (Build37)
Map Location 61,637,113 - 61,638,227
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043524, LOC668183
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273E10.bB6Ng01-273E10.g
ACCGA074891GA074892
length1,1941,112
definitionB6Ng01-273E10.b B6Ng01-273E10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatctctgtaccccatttttgatagggttattgggttctctg
gagtctaacttcttgagttctttatatatattggaatataagccctctat
gggatatagggttggtaaagttcttttgccaatctgttggttttgtccta
ttgacagtgtcctttctctcatagaagttttacaattctatgagattcca
tttgtctatttttgaccttagagcttaagtaattgatgttctgttcagga
aatttttccctgttcccatgtgtttgaggcttttgcttactctcttctgt
tagattcagtgtatctggttttatgtggaggtccttgatccacttggact
tgagctttgtacaaggagataagaatggatcagtcttcattgttctgtat
gttaacagccagtcgaaccagcaccatttgttgaaaatgctatctttttt
tccactggatggttttacctcctttgtcaaagatcaagtgaacatagttg
tgtgggttcatttctgggtcttcaaatctattccattgatctacctgctt
gccactgtaccaatgccatgccagtttttatcacaattgctctgtagtag
agcttgaggtcagggatggtgattcccccaaagttcttttattgttggga
atagtttttgctatcctgggtttttttgttattccagatgaatttggaaa
ttgctctttctaactctacgaagaactaatttggaattttgttggggact
gcattgaatctgtagattgctttcggtaagatggccacttttactatatt
aatcctacaaatacatgagcatgggagatctttccatcttctgaaatctt
ctatttctttcttttagagacttgaagttcttatcaaacagatctttcac
ttgcttagttagagtcataccaaggtattttatattacttgagactattg
tgaaaggtgttgctttccctaatttctttctcagcttgtttatcctttga
gtagaggaaagccaatgatttcaggtaattttttatcagccaatttgctg
agtggttatcagttagggagttcctctggtgaatttttagatcactagta
agctatccatatatctgccaaatagtgaatatttgactctttcctccatg
agcttgagcttgtgataactcctctggctgaggacttcatgagt
gaattcaaattgctctacatggtaatttggagagacatgaatgtctgtac
tgtcttttcaaaatttataaatgtagttatttccctacaaacacacaatt
acagctacagctgtgcttatttataacaaatgaaatgaaagagtcacaaa
taatatcaagcaagtgaaaagcataacagcagaaacaatttccttttctt
aactctattttctaaatgatcctttattacacttcttcctttagtcgacg
ctgatattagactgctgaattctaatgcctctcattttcttgtatagtag
ttaacaagaaattgaatattattaatttcattttgtgattattgatcctt
agcaggaagcttttgtttttattctctttaattaactaagcactgttctg
aggataattactttcagagcaaagaaacacatctttctgataatttcaaa
tctgcttggtttcttaaaacagtaaataaaaatgctaagtgatttcagcc
tatgactaaacaatcaatcagaaagcatttccctaatttttcccccaaat
gtcttcatttttcttctattcctagaataatgtaagaatctaagacttaa
gtatcgatggtgcggagttaccagtgagtgacagtgtttgacactgatta
gtaaaataatagatatataactagcctgtatattttatggatattaatat
acattaattatgtcttcatttatttatccaactataagcatgcttatact
gatacttctgtttacaaatcagttcatatttcattataattctatttgtt
tattgttagtaatctttctgactttacacaaactagtcatacttatctct
gaaacatgcattttctaacaacaaaaagtacaataagtattttagaaaca
caattggtttttgtgtccatttcacataaactcttttttttaaagcagca
tttctttttcattctggtgttctatagtctctatatccatcttattcagt
tttctcttcattgcttgatgactaatttatttttgtgaagatatataaat
caggagggtgaaacctcattggcttattgatacaatcaatatttattggt
atcttgaatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_61637113_61638227
seq2: B6Ng01-273E10.g_65_1176 (reverse)

seq1  AGGA-TCAAGATA-CAAT-AATATGATTTGTATCAATAAGCCAATTGAGT  47
      |||| |||||||| |||| |||||   ||||||||||||||||| |||| 
seq2  AGGATTCAAGATACCAATAAATATTGATTGTATCAATAAGCCAA-TGAGG  49

seq1  TTTCA-CCTCTTGATTTTATATTATTCTTCAACAAAAATAAATTAGTCAT  96
      ||||| |||| ||| |||||||   ||||| |||||||||||||||||| 
seq2  TTTCACCCTCCTGA-TTTATAT--ATCTTC-ACAAAAATAAATTAGTCA-  94

seq1  TCAAGCAATGAAAGAGAAAACTGAATAAGATGGATATAGAGACTAATAGA  146
      |||||||||| ||||||||||||||||||||||||||||||||| |||||
seq2  TCAAGCAATG-AAGAGAAAACTGAATAAGATGGATATAGAGACT-ATAGA  142

seq1  ACACCAGAATGAAAAAGAAATGCTGCTTTTAAAAAAAGAG-TTATGTGAA  195
      ||||||||||||||||||||||||||||| |||||||||| |||||||||
seq2  ACACCAGAATGAAAAAGAAATGCTGCTTTAAAAAAAAGAGTTTATGTGAA  192

seq1  ATGGACACAAAAACCAATTGTGTTTCTAAAATACTTATTGTACTTTTTGT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACACAAAAACCAATTGTGTTTCTAAAATACTTATTGTACTTTTTGT  242

seq1  TGTTAGAAAATGCATGTTTCAGAGATAAGTATGACTAGTTTGTGTAAAGT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGAAAATGCATGTTTCAGAGATAAGTATGACTAGTTTGTGTAAAGT  292

seq1  CAGAAAGATTACTAACAATAAACAAATAGAATTATAATGAAATATGAACT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGATTACTAACAATAAACAAATAGAATTATAATGAAATATGAACT  342

seq1  GATTTGTAAACAGAAGTATCAGTATAAGCATGCTTATAGTTGGATAAATA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTAAACAGAAGTATCAGTATAAGCATGCTTATAGTTGGATAAATA  392

seq1  AATGAAGACATAATTAATGTATATTAATATCCATAAAATATACAGGCTAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGACATAATTAATGTATATTAATATCCATAAAATATACAGGCTAG  442

seq1  TTATATATCTATTATTTTACTAATCAGTGTCAAACACTGTCACTCACTGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATCTATTATTTTACTAATCAGTGTCAAACACTGTCACTCACTGG  492

seq1  TAACTCCGCACCATCGATACTTAAGTCTTAGATTCTTACATTATTCTAGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCCGCACCATCGATACTTAAGTCTTAGATTCTTACATTATTCTAGG  542

seq1  AATAGAAGAAAAATGAAGACATTTGGGGGAAAAATTAGGGAAATGCTTTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAGAAAAATGAAGACATTTGGGGGAAAAATTAGGGAAATGCTTTC  592

seq1  TGATTGATTGTTTAGTCATAGGCTGAAATCACTTAGCATTTTTATTTACT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGATTGTTTAGTCATAGGCTGAAATCACTTAGCATTTTTATTTACT  642

seq1  GTTTTAAGAAACCAAGCAGATTTGAAATTATCAGAAAGATGTGTTTCTTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAGAAACCAAGCAGATTTGAAATTATCAGAAAGATGTGTTTCTTT  692

seq1  GCTCTGAAAGTAATTATCCTCAGAACAGTGCTTAGTTAATTAAAGAGAAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGAAAGTAATTATCCTCAGAACAGTGCTTAGTTAATTAAAGAGAAT  742

seq1  AAAAACAAAAGCTTCCTGCTAAGGATCAATAATCACAAAATGAAATTAAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAAGCTTCCTGCTAAGGATCAATAATCACAAAATGAAATTAAT  792

seq1  AATATTCAATTTCTTGTTAACTACTATACAAGAAAATGAGAGGCATTAGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCAATTTCTTGTTAACTACTATACAAGAAAATGAGAGGCATTAGA  842

seq1  ATTCAGCAGTCTAATATCAGCGTCGACTAAAGGAAGAAGTGTAATAAAGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCAGTCTAATATCAGCGTCGACTAAAGGAAGAAGTGTAATAAAGG  892

seq1  ATCATTTAGAAAATAGAGTTAAGAAAAGGAAATTGTTTCTGCTGTTATGC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTAGAAAATAGAGTTAAGAAAAGGAAATTGTTTCTGCTGTTATGC  942

seq1  TTTTCACTTGCTTGATATTATTTGTGACTCTTTCATTTCATTTGTTATAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACTTGCTTGATATTATTTGTGACTCTTTCATTTCATTTGTTATAA  992

seq1  ATAAGCACAGCTGTAGCTGTAATTGTGTGTTTGTAGGGAAATAACTACAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCACAGCTGTAGCTGTAATTGTGTGTTTGTAGGGAAATAACTACAT  1042

seq1  TTATAAATTTTGAAAAGACAGTACAGACATTCATGTCTCTCCAAATTACC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATTTTGAAAAGACAGTACAGACATTCATGTCTCTCCAAATTACC  1092

seq1  ATGTAGAGCAATTTGAATTC  1115
      ||||||||||||||||||||
seq2  ATGTAGAGCAATTTGAATTC  1112