BAC Information

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BAC

Clone NameB6Ng01-273J18
Chromosome16 (Build37)
Map Location 32,285,344 - 32,475,777
singlet/doubletdoublet
Overlap geneRnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta
Upstream geneApod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik
Downstream geneZdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791, Osbpl11, Snx4, Zfp148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273J18.bB6Ng01-273J18.g
ACCGA075140GA075141
length1,1171,121
definitionB6Ng01-273J18.b B6Ng01-273J18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,285,344 - 32,286,456)(32,474,652 - 32,475,777)
sequence
gaattcattggagatacattctcactagtttttacttaattttctgttaa
aattattgtgaaatatgagtatttcagagactcaaaaaagggtgtccttc
attatttttaaggtggaggctgagcgacaagccagcaaggaagaggaaaa
caaagccagtgaggagtacatccagagattgttggctgaggaggaggagg
aggagaaaagacagagagaaaaaagaagaagtgagatggaagaacagctg
agaggcgatgaagaactggctaggagcctgagcaccagtatcgtaagttt
acacagacatgctcccatctttggcacctgaagaaggcactacaacaatt
agaagtttgttaggatatatttgtcctactaaaggaaaaacttttttttt
ttttttccccagacagggtttctctgtatagccctggctgtcctggaact
cactttgtagaccaggctggcctcgaactcagaaatccacctgtctctgc
ctcccgagtgctgggattaaaggccaccatgcccagcacatttttttttt
ttaatttgtgagtatataccacatgtgtttgggtgtccccagggccagaa
gggcatcagatctacctgaattataggcagttgtgagccacctgacgtgg
ttgctaggaagtgacttgggtcctctcaagagcagttggtgatttaaacc
tctgagccatctctccaactccaagataaataatagtaataataataaca
acagacttttcttgtgttttgtttgtttgttgttgtctattgtctgtctg
tctttagtcctgtgcattctagggactccctgtggagatctcacagaggt
cgcctgcctctaacctccctcttgaatgctagtattaaaggcctgtataa
cactctcagcccaacaaactttttttatgaatgcaacttttttttttaaa
gatttattttatttaatagtaccacttgtagctgtctcagaacacaccag
aaaagggacattcagatcccattacagatgttggtgagccattatgtgct
ttgcttgggaattgactctttagcgactgagccatctttcaaccctgatg
cacattttgtgtacatt
gaattctcttctgtccctcagccttatcagtggttaaggctccccctggc
agagcaggctggcagcttccatgtgactatagggatgaaggtaaagtgca
gtgggttgaacctgttttgagtctttctcatttttgtaataaatggtgaa
agctgagacgcttgcacaagacacactgcttctgttggcgccactattaa
ccctgaatacgtcaaaagtcaccttgagcttctgcacaggagaatgaaga
ggagaagagacatacatggttgatgtatggtttatctgatataagaatgg
gagtagaccttagccgggcacaacagcaccagcccagcttccccaagctt
ggctctgcactggaatccttctctccttaggagcatcagttgactattgg
gaggtctgaggtccctttgtgccagccttttgacttttcagtaagaactg
aaaagtttcttttgggaacagaacgctcgttaatatggtagcgatgcgga
ggtattgatattgaggacagaaaattaggacacaaaatcaaaggaactga
gaatacaaataaaagcccccagtacttaaaacattacatacatgtatgtc
tggtcaaaaccacaggaaattgaaacaccaggcaaaaacacatggccttt
atttggctgaatgacaaaagccaatacaattctgcacaaagtattagaca
gtaacgtgagacactgaactcggaggcaaactccccattgcactggtaat
gtcatgggtgactctttccaacagtgttttctgttcaggagccttgatgc
aaaacactcagccaaccaactctaactgttcagaacagtcactttctcca
atagggtgggaaggagctcacttcaaacctagtgaaacccaacctgggtc
atctaaatgttaatcctggcattttctgttctctaccccatctcctgccg
acaaaagttcttggcaacttatttcttttttcttttaggagagctaactt
ttatagatagtccagaacatggtcctacttatttgaaaatagaagctagg
accacttcttatccatgattattctatttctgagagaaaacatcattgtt
atgacctttgaaaattacctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32285344_32286456
seq2: B6Ng01-273J18.b_43_1159

seq1  GAATTCATTGGAGATACATTCTCACTAGTTTTTACTTAATTTTCTGTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGGAGATACATTCTCACTAGTTTTTACTTAATTTTCTGTTAA  50

seq1  AATTATTGTGAAATATGAGTATTTCAGAGACTCAAAAAAGGGTGTCCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTGTGAAATATGAGTATTTCAGAGACTCAAAAAAGGGTGTCCTTC  100

seq1  ATTATTTTTAAGGTGGAGGCTGAGCGACAAGCCAGCAAGGAAGAGGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTTAAGGTGGAGGCTGAGCGACAAGCCAGCAAGGAAGAGGAAAA  150

seq1  CAAAGCCAGTGAGGAGTACATCCAGAGATTGTTGGCTGAGGAGGAGGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCAGTGAGGAGTACATCCAGAGATTGTTGGCTGAGGAGGAGGAGG  200

seq1  AGGAGAAAAGACAGAGAGAAAAAAGAAGAAGTGAGATGGAAGAACAGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAAAGACAGAGAGAAAAAAGAAGAAGTGAGATGGAAGAACAGCTG  250

seq1  AGAGGCGATGAAGAACTGGCTAGGAGCCTGAGCACCAGTATCGTAAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCGATGAAGAACTGGCTAGGAGCCTGAGCACCAGTATCGTAAGTTT  300

seq1  ACACAGACATGCTCCCATCTTTGGCACCTGAAGAAGGCACTACAACAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACATGCTCCCATCTTTGGCACCTGAAGAAGGCACTACAACAATT  350

seq1  AGAAGTTTGTTAGGATATATTTGTCCTACTAAAGGAAAAACTTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTTGTTAGGATATATTTGTCCTACTAAAGGAAAAACTTTTTTTTT  400

seq1  TTTTTTCCCCAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCCCAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACT  450

seq1  CACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGTCTCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGTCTCTGC  500

seq1  CTCCCGAGTGCTGGGATTAAAGGCCACCATGCCCAGCACATTTTTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCGAGTGCTGGGATTAAAGGCCACCATGCCCAGCACATTTTTTTTTT  550

seq1  TTAATTTGTGAGTATATACCACATGTGTTTGGGTGTCCCCAGGGCCAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTGTGAGTATATACCACATGTGTTTGGGTGTCCCCAGGGCCAGAA  600

seq1  GGGCATCAGATCTACCTGAATTATAGGCAGTTGTGAGCCACCTGACGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATCAGATCTACCTGAATTATAGGCAGTTGTGAGCCACCTGACGTGG  650

seq1  TTGCTAGGAAGTGACTTGGGTCCTCTCAAGAGCAGTTGGTGATTTAAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGGAAGTGACTTGGGTCCTCTCAAGAGCAGTTGGTGATTTAAACC  700

seq1  TCTGAGCCATCTCTCCAACTCCAAGATAAATAATAGTAATAATAATAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCCATCTCTCCAACTCCAAGATAAATAATAGTAATAATAATAACA  750

seq1  ACAGACTTTTCTTGTGTTTTGTTTGTTTGTTGTTGTCTATTGTCTGTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACTTTTCTTGTGTTTTGTTTGTTTGTTGTTGTCTATTGTCTGTCTG  800

seq1  TCTTTAGTCCTGTGCATTCTAGGGACTCCCTGTGGAGATCTCACAGAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGTCCTGTGCATTCTAGGGACTCCCTGTGGAGATCTCACAGAGGT  850

seq1  CGCCTGCCTCTAACCTCCCTCTTGAATGCTAGTATTAAAGGCCTGTATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTGCCTCTAACCTCCCTCTTGAATGCTAGTATTAAAGGCCTGTATAA  900

seq1  CACTCTCAGCCCAACAAAC-TTTTTTATGAATGCAACTTTTTTTTTTAAA  949
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CACTCTCAGCCCAACAAACTTTTTTTATGAATGCAACTTTTTTTTTTAAA  950

seq1  GATTTATTTTATTT-ATAGTA-CAC-TGTAGCTGTCTTCAG-ACACACCA  995
      |||||||||||||| |||||| ||| |||||||||| |||| ||||||||
seq2  GATTTATTTTATTTAATAGTACCACTTGTAGCTGTC-TCAGAACACACCA  999

seq1  GAAAAAGGACA-TCAGATCCCATTACAGATGGTTGTGAGCCACTATGTGC  1044
      ||||| ||||| ||||||||||||||||||| | |||||||| |||||||
seq2  GAAAAGGGACATTCAGATCCCATTACAGATGTTGGTGAGCCATTATGTGC  1049

seq1  -TTGC-TGGGAATTGACTC-TTAGCAACTGAGCCATCTTTCCAACCCTGA  1091
       |||| ||||||||||||| ||||| |||||||||||||| |||||||| 
seq2  TTTGCTTGGGAATTGACTCTTTAGCGACTGAGCCATCTTT-CAACCCTG-  1097

seq1  ATGCAACATTTTTGTGTACATT  1113
      |||| ||| |||||||||||||
seq2  ATGC-ACA-TTTTGTGTACATT  1117

seq1: chr16_32474652_32475777
seq2: B6Ng01-273J18.g_67_1187 (reverse)

seq1  AAGGTATTTTTCAAA-GTCATAACAATGATTGTTTTCTCTCAG-AATAG-  47
      |||||| |||||||| ||||||||||||| ||||||||||||| ||||| 
seq2  AAGGTAATTTTCAAAGGTCATAACAATGA-TGTTTTCTCTCAGAAATAGA  49

seq1  ATTATCATGGGATAAAGAGTGGTCCCTAGCTTCTATTTTTCAAAATAAGT  97
      || ||||| ||||||  |||||| |||||||||||||||   ||||||||
seq2  ATAATCAT-GGATAAGAAGTGGT-CCTAGCTTCTATTTT--CAAATAAGT  95

seq1  AGGA-CATGTTCTTGGACTTAATCTATTAAAAGTTAGCTCTCCTAAAAGA  146
      |||| ||||||| ||||||  ||||| |||||||||||||||||||||||
seq2  AGGACCATGTTC-TGGACT--ATCTA-TAAAAGTTAGCTCTCCTAAAAGA  141

seq1  AAAAAGAAATAAGTTTGCCAGAACTTTTTGTCGGCAGGAGATTGGGGTAG  196
      |||||||||||||||  | ||||| |||||||||||||||| ||||||||
seq2  AAAAAGAAATAAGTTGCCAAGAAC-TTTTGTCGGCAGGAGA-TGGGGTAG  189

seq1  AGAACAG-AAATGCCAGGATTAACATTTAGATGACCCAGGTTGGGTTTCA  245
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGAAAATGCCAGGATTAACATTTAGATGACCCAGGTTGGGTTTCA  239

seq1  CTAGGTTTGAAGTGAGCTCCTT-CCACCCTATTGGAGAAAGTGACTGTTC  294
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTAGGTTTGAAGTGAGCTCCTTCCCACCCTATTGGAGAAAGTGACTGTTC  289

seq1  TGAACAGTTAGAGTTGGTTGGCTGAGTGTTTTGCATCAAGGCTCCTGAAC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAGTTAGAGTTGGTTGGCTGAGTGTTTTGCATCAAGGCTCCTGAAC  339

seq1  AGAAAACACTGTTGGAAAGAGTCACCCATGACATTACCAGTGCAATGGGG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACACTGTTGGAAAGAGTCACCCATGACATTACCAGTGCAATGGGG  389

seq1  AGTTTGCCTCCGAGTTCAGTGTCTCACGTTACTGTCTAATACTTTGTGCA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCCTCCGAGTTCAGTGTCTCACGTTACTGTCTAATACTTTGTGCA  439

seq1  GAATTGTATTGGCTTTTGTCATTCAGCCAAATAAAGGCCATGTGTTTTTG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGTATTGGCTTTTGTCATTCAGCCAAATAAAGGCCATGTGTTTTTG  489

seq1  CCTGGTGTTTCAATTTCCTGTGGTTTTGACCAGACATACATGTATGTAAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGTTTCAATTTCCTGTGGTTTTGACCAGACATACATGTATGTAAT  539

seq1  GTTTTAAGTACTGGGGGCTTTTATTTGTATTCTCAGTTCCTTTGATTTTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAGTACTGGGGGCTTTTATTTGTATTCTCAGTTCCTTTGATTTTG  589

seq1  TGTCCTAATTTTCTGTCCTCAATATCAATACCTCCGCATCGCTACCATAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTAATTTTCTGTCCTCAATATCAATACCTCCGCATCGCTACCATAT  639

seq1  TAACGAGCGTTCTGTTCCCAAAAGAAACTTTTCAGTTCTTACTGAAAAGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGAGCGTTCTGTTCCCAAAAGAAACTTTTCAGTTCTTACTGAAAAGT  689

seq1  CAAAAGGCTGGCACAAAGGGACCTCAGACCTCCCAATAGTCAACTGATGC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGCTGGCACAAAGGGACCTCAGACCTCCCAATAGTCAACTGATGC  739

seq1  TCCTAAGGAGAGAAGGATTCCAGTGCAGAGCCAAGCTTGGGGAAGCTGGG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGGAGAGAAGGATTCCAGTGCAGAGCCAAGCTTGGGGAAGCTGGG  789

seq1  CTGGTGCTGTTGTGCCCGGCTAAGGTCTACTCCCATTCTTATATCAGATA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCTGTTGTGCCCGGCTAAGGTCTACTCCCATTCTTATATCAGATA  839

seq1  AACCATACATCAACCATGTATGTCTCTTCTCCTCTTCATTCTCCTGTGCA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATACATCAACCATGTATGTCTCTTCTCCTCTTCATTCTCCTGTGCA  889

seq1  GAAGCTCAAGGTGACTTTTGACGTATTCAGGGTTAATAGTGGCGCCAACA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCAAGGTGACTTTTGACGTATTCAGGGTTAATAGTGGCGCCAACA  939

seq1  GAAGCAGTGTGTCTTGTGCAAGCGTCTCAGCTTTCACCATTTATTACAAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGTGTGTCTTGTGCAAGCGTCTCAGCTTTCACCATTTATTACAAA  989

seq1  AATGAGAAAGACTCAAAACAGGTTCAACCCACTGCACTTTACCTTCATCC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAAAGACTCAAAACAGGTTCAACCCACTGCACTTTACCTTCATCC  1039

seq1  CTATAGTCACATGGAAGCTGCCAGCCTGCTCTGCCAGGGGGAGCCTTAAC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTCACATGGAAGCTGCCAGCCTGCTCTGCCAGGGGGAGCCTTAAC  1089

seq1  CACTGATAAGGCTGAGGGACAGAAGAGAATTC  1126
      ||||||||||||||||||||||||||||||||
seq2  CACTGATAAGGCTGAGGGACAGAAGAGAATTC  1121