BAC Information

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BAC

Clone NameB6Ng01-274D21
Chromosome16 (Build37)
Map Location 62,068,656 - 62,069,769
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043524, LOC668183
Downstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274D21.bB6Ng01-274D21.g
ACCGA075597GA075598
length1,1141,173
definitionB6Ng01-274D21.b B6Ng01-274D21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtactaaaaccatctgtctctgggtttttttggtttgttgctg
ttgttgttgttgtttttgtattttggggaaggtggggattggtagacttg
aattaaggcttctatttccttatatgtcatggaactctttatacaattta
gtggatcctgatctcacttttgtacattgtatcagtctggaaacatacat
ttcctctagattgtccagttttgctgagtatcagcttttatagtaagacc
tgatgtttttttttttttttttaggttgctagtatgggttctctccaatt
tatttatgaaggcactcagtattatgaattttcctcttaacactgctatc
attgtgttccatatgttttggtatgctgtgtcttcattttcattaaattc
tagcacaattactagtgaaatacattttctacaatattcattatagaatt
ttattttatctgaataaaatatgtttctgaataaagttaaaaaaagtttt
ttatggtaagaggaaaaatgagttcctcgatgagttcccagactgagggc
cagtcctattttctgaagatagctaacagtgtgcttgactcctagtattt
gctgttgctatcattcaaatttttatagtgcacaggaaaaatattataag
caaaaaacaaacaaaagatcaggttgttgttcactagtttacacagaata
atttaagtttttagggctaatacattaggaattgaaaatttagtgtgaaa
atagaagtctctggaaactcaaaataaatgtgaaggactgaatattaagt
aggcagagaggcaaaagttgtgttattggtataatataaaatttggcata
ttaaataaaggacctgagtatatacctggtatttaaatctgagttggagc
aactgagagatggtctctgaagattcttccccctcacatacttttcttta
aactattttaattttttttaattcacatgatgtattgaccatatttcttt
ttcctcttctaatttcctcctaagatacactaaatttcctctcctttatc
ctggaaattgtgtctctttcctcacaattttgttaagtctctcatgaccc
catttctcactccc
gaattctctcagaccttcaaagaagacctaacaccaataatcttcaaatc
atttcacaaaatagaagtagaaagaacactacccaatttgttctatgaag
ccacagttactctgataccaaaaccacacaaaaacctaacaaagaagaaa
ttcagaccaatttcctttttgaatatcgatgcaaaaatactcagtaaaat
aaaccggatccaagaacatatcaaaacaatcattcaccacaattaagtag
gcttcattgcggagatgcaggaatggtttaatatacagaaatccatcaac
ataatccactaaattagttgaaagaaaaaaaaaaacacatgatcatttcg
ttagatgctgaaaaagcatttcaaaaaattcaacatctcttcaagttaaa
catcttggaaaaatcaggaattcatacctaaacatagtaaaagcaatcta
tagcaaaccagtagccaacatcaaattacatgaagagaaatctgaagcaa
acctactacaataagggcctagacaaggctgttcactttctccctatcta
ttcaatatagaacttgaagttctaggtagagcaattagacaacaaaaaga
ggtcaaagcaatacacattagaaaggaagaagaaatatcactatttacag
atgataggatagaatgactaagtgaccccaaaacttccaccagagaactc
ctaaacctgataaacaactttagcaaagtggctggatgtaaaattaactc
aaactaatcagtggccttcctcaactcaaaggataaacagaatgagaaag
aaattaaaggaaattacacccttcacaatagtcacaaacaatataaaata
ccttggtgttactgtaactaaaggaatgaaagatctatatgacaagaact
tcaaggtctctgaagaaagaaatcaaagaactcagaagatggaaagatcc
ccatcctcatggattaacagattaacatagtaaaaatggccatattgcta
aagcacctacagattcatgcaatccccatcaagattcaactcaatatcac
tgagttaagaaaggcatttgcaagtcatctgatatcgaaacctatctcaa
cataaaagactccagtgaatccagtcctgaactaactgtacacagagcaa
tggtgataaaaactgccaatggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_62068656_62069769
seq2: B6Ng01-274D21.b_48_1161

seq1  GAATTCTGTACTAAAACCATCTGTCTCTGGGTTTTTTTGGTTTGTTGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTACTAAAACCATCTGTCTCTGGGTTTTTTTGGTTTGTTGCTG  50

seq1  TTGTTGTTGTTGTTTTTGTATTTTGGGGAAGGTGGGGATTGGTAGACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTGTTGTTTTTGTATTTTGGGGAAGGTGGGGATTGGTAGACTTG  100

seq1  AATTAAGGCTTCTATTTCCTTATATGTCATGGAACTCTTTATACAATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGGCTTCTATTTCCTTATATGTCATGGAACTCTTTATACAATTTA  150

seq1  GTGGATCCTGATCTCACTTTTGTACATTGTATCAGTCTGGAAACATACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATCCTGATCTCACTTTTGTACATTGTATCAGTCTGGAAACATACAT  200

seq1  TTCCTCTAGATTGTCCAGTTTTGCTGAGTATCAGCTTTTATAGTAAGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTAGATTGTCCAGTTTTGCTGAGTATCAGCTTTTATAGTAAGACC  250

seq1  TGATGTTTTTTTTTTTTTTTTTAGGTTGCTAGTATGGGTTCTCTCCAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTTTTTTTTTTTTTTTTAGGTTGCTAGTATGGGTTCTCTCCAATT  300

seq1  TATTTATGAAGGCACTCAGTATTATGAATTTTCCTCTTAACACTGCTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATGAAGGCACTCAGTATTATGAATTTTCCTCTTAACACTGCTATC  350

seq1  ATTGTGTTCCATATGTTTTGGTATGCTGTGTCTTCATTTTCATTAAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTTCCATATGTTTTGGTATGCTGTGTCTTCATTTTCATTAAATTC  400

seq1  TAGCACAATTACTAGTGAAATACATTTTCTACAATATTCATTATAGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACAATTACTAGTGAAATACATTTTCTACAATATTCATTATAGAATT  450

seq1  TTATTTTATCTGAATAAAATATGTTTCTGAATAAAGTTAAAAAAAGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATCTGAATAAAATATGTTTCTGAATAAAGTTAAAAAAAGTTTT  500

seq1  TTATGGTAAGAGGAAAAATGAGTTCCTCGATGAGTTCCCAGACTGAGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTAAGAGGAAAAATGAGTTCCTCGATGAGTTCCCAGACTGAGGGC  550

seq1  CAGTCCTATTTTCTGAAGATAGCTAACAGTGTGCTTGACTCCTAGTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTATTTTCTGAAGATAGCTAACAGTGTGCTTGACTCCTAGTATTT  600

seq1  GCTGTTGCTATCATTCAAATTTTTATAGTGCACAGGAAAAATATTATAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTGCTATCATTCAAATTTTTATAGTGCACAGGAAAAATATTATAAG  650

seq1  CAAAAAACAAACAAAAGATCAGGTTGTTGTTCACTAGTTTACACAGAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAACAAACAAAAGATCAGGTTGTTGTTCACTAGTTTACACAGAATA  700

seq1  ATTTAAGTTTTTAGGGCTAATACATTAGGAATTGAAAATTTAGTGTGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGTTTTTAGGGCTAATACATTAGGAATTGAAAATTTAGTGTGAAA  750

seq1  ATAGAAGTCTCTGGAAACTCAAAATAAATGTGAAGGACTGAATATTAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGTCTCTGGAAACTCAAAATAAATGTGAAGGACTGAATATTAAGT  800

seq1  AGGCAGAGAGGCAAAAGTTGTGTTATTGGTATAATATAAAATTTGGCATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGAGGCAAAAGTTGTGTTATTGGTATAATATAAAATTTGGCATA  850

seq1  TTAAATAAAGGACCTGAGTAATATACCTGGTATTTAAAATCTGAGTTGGA  900
      ||||||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  TTAAATAAAGGACCTGAGT-ATATACCTGGTATTT-AAATCTGAGTTGGA  898

seq1  GCAACTGAGAGATGGTCTCTGAAGATTCTTCCCCCTCACATACTTTTCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGAGAGATGGTCTCTGAAGATTCTTCCCCCTCACATACTTTTCTT  948

seq1  TTAACTATTTTAATTTTTTTTAATTCACATGATGTATTTGACCATATT--  998
      | |||||||||||||||||||||||||||||||||| |||||||||||  
seq2  TAAACTATTTTAATTTTTTTTAATTCACATGATGTA-TTGACCATATTTC  997

seq1  CTTTTCCTCTTCTAATTT-CTCCT-AGATACAACTAATTTCTCTTCCTTT  1046
       ||||||||||||||||| ||||| |||||||   ||||||   ||||||
seq2  TTTTTCCTCTTCTAATTTCCTCCTAAGATACACTAAATTTCCTCTCCTTT  1047

seq1  ATCCTGAAAATTTGTGTTCTCTTT-CTCACATTTTGTTTATGTCTCTCAT  1095
      |||||| ||| ||||| ||||||| |||||| |||  ||| |||||||||
seq2  ATCCTGGAAA-TTGTG-TCTCTTTCCTCACAATTTTGTTAAGTCTCTCAT  1095

seq1  TGCCCCCTTTCTCACTCCC  1114
        |||| ||||||||||||
seq2  GACCCCATTTCTCACTCCC  1114