MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-275B24
Chromosome	16 (Build37)
Map Location	93,991,830 - 94,097,954
singlet/doublet	doublet
Overlap gene	Cldn14, Sim2
Upstream gene	LOC100040747, Setd4, LOC670912, Cbr1, EG435489, Cbr3, Dopey2, Morc3, Chaf1b
Downstream gene	Hlcs, LOC622832, LOC100040857, Dscr6, LOC545178, Pigp, Ttc3, Dscr3, Dyrk1a, Kcnj6
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040747 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Setd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224440 MGI:2136890
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC670912 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	Cbr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12408 MGI:88284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG435489 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435489 MGI:3646098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 8 Proteins

name	Cbr3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109857 MGI:1309992
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dopey2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70028 MGI:1917278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Morc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:338467 MGI:2136841
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chaf1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110749 MGI:1314881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cldn14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56173 MGI:1860425
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sim2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20465 MGI:98307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hlcs (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110948 MGI:894646
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC622832 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622832
definition	note : heterogeneous nuclear ribonucleoprotein A3 pseudogene pseudo : _no_value

name	LOC100040857 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Dscr6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170765 MGI:2181192
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545178 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545178
definition	note : developmental pluripotency associated 5 pseudogene pseudo : _no_value

name	Pigp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56176 MGI:1860433
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22129 MGI:1276539
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dscr3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13185 MGI:1206040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dyrk1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13548 MGI:1330299
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnj6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16522 MGI:104781
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	LOC100040747 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268198 GeneID:100040747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100040747 transcript_id : XM_001475175.1

name	Setd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803504 GeneID:224440 MGI:2136890
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET domain containing 4 transcript_id : NM_145482.2

name	LOC670912 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268200 GeneID:670912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : hypothetical LOC670912 transcript_id : XM_001475221.1

name	Cbr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113680351 GeneID:12408 MGI:88284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonyl reductase 1 transcript_id : NM_007620.2

name	EG435489 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400743 GeneID:435489 MGI:3646098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 8 Proteins product : predicted gene, EG435489 transcript_id : XM_487442.3

name	Cbr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982073 GeneID:109857 MGI:1309992
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonyl reductase 3 transcript_id : NM_173047.2

name	Dopey2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62243807 GeneID:70028 MGI:1917278
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dopey family member 2 transcript_id : NM_027293.1

name	Dopey2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62243773 GeneID:70028 MGI:1917278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dopey family member 2 transcript_id : NM_026700.2

name	Morc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803512 GeneID:338467 MGI:2136841
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microrchidia 3 transcript_id : NM_001045529.2

name	Chaf1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385111 GeneID:110749 MGI:1314881
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromatin assembly factor 1, subunit B (p60) transcript_id : NM_028083.2

name	Cldn14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328493 GeneID:56173 MGI:1860425
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 14 transcript_id : NM_019500.3

name	Sim2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119226236 GeneID:20465 MGI:98307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : single-minded homolog 2 (Drosophila) transcript_id : NM_011377.2

name	Hlcs (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803440 GeneID:110948 MGI:894646
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) transcript_id : NM_139145.3

name	LOC100040857 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268203 GeneID:100040857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100040857 transcript_id : XM_001475398.1

name	Dscr6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:18875389 GeneID:170765 MGI:2181192
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Down syndrome critical region homolog 6 (human) transcript_id : NM_133229.1

name	Pigp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980951 GeneID:56176 MGI:1860433
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol glycan anchor biosynthesis, class P transcript_id : NM_019543.2

name	Ttc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678452 GeneID:22129 MGI:1276539
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 3 transcript_id : NM_009441.1

name	Dscr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352653 GeneID:13185 MGI:1206040
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Down syndrome critical region gene 3 transcript_id : NM_007834.2

name	Dyrk1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24418934 GeneID:13548 MGI:1330299
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a transcript_id : NM_007890.1

name	Kcnj6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95006995 GeneID:16522 MGI:104781
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium inwardly-rectifying channel, subfamily J, member 6 transcript_id : NM_001025584.2

name	Kcnj6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71051586 GeneID:16522 MGI:104781
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium inwardly-rectifying channel, subfamily J, member 6 transcript_id : NM_010606.2

name	Kcnj6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71051592 GeneID:16522 MGI:104781
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium inwardly-rectifying channel, subfamily J, member 6 transcript_id : NM_001025590.1

name	Kcnj6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95006996 GeneID:16522 MGI:104781
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium inwardly-rectifying channel, subfamily J, member 6 transcript_id : NM_001025585.2

name	LOC100040747 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268199 GeneID:100040747
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475225.1

name	Setd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703952 CCDS:CCDS28340.1 GeneID:224440 MGI:2136890
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : SET domain containing 4 protein_id : NP_663457.1

name	LOC670912 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268201 GeneID:670912
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475271.1

name	Cbr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113680352 CCDS:CCDS28341.1 GeneID:12408 MGI:88284
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004090 - carbonyl reductase (NADPH) activity [Evidence TAS]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : carbonyl reductase 1 protein_id : NP_031646.2

name	EG435489 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51830180 GeneID:435489 MGI:3646098
definition	codon_start : 1 product : similar to Carbonyl reductase 1 protein_id : XP_487442.1

name	Cbr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27413160 CCDS:CCDS28342.1 GeneID:109857 MGI:1309992
definition	codon_start : 1 product : carbonyl reductase 3 protein_id : NP_766635.1

name	Dopey2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62243808 CCDS:CCDS28343.1 GeneID:70028 MGI:1917278
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : pad-1-like isoform 1 protein_id : NP_081569.1

name	Dopey2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15022807 GeneID:70028 MGI:1917278
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : pad-1-like isoform 2 protein_id : NP_080976.1

name	Morc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865911 GeneID:338467 MGI:2136841
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : zinc finger, CW-type with coiled-coil domain 3 product : microrchidia 3 protein_id : NP_001038994.1

name	Chaf1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312470 CCDS:CCDS28344.1 GeneID:110749 MGI:1314881
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : CAF-1 subunit B; CAF-I 60 kDa subunit product : chromatin assembly factor 1 subunit B protein_id : NP_082359.1

name	Cldn14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328494 CCDS:CCDS28345.1 GeneID:56173 MGI:1860425
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] GO_function : GO:0042802 - identical protein binding [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence ISS] codon_start : 1 product : claudin 14 protein_id : NP_062373.3

name	Sim2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119226237 GeneID:20465 MGI:98307
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA]; GO:0000155 - two-component sensor activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0009880 - embryonic pattern specification [Evidence IMP]; GO:0030324 - lung development [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0007399 - nervous system development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 note : single-minded 2 product : single-minded homolog 2 protein_id : NP_035507.2

name	Hlcs (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20982837 CCDS:CCDS28346.1 GeneID:110948 MGI:894646
definition	GO_function : GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]; GO:0004078 - biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity [Evidence IEA]; GO:0004079 - biotin-[methylmalonyl-CoA-carboxytransferase] ligase activity [Evidence IEA]; GO:0004080 - biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA] codon_start : 1 note : biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase product : holocarboxylase synthetase protein_id : NP_631884.1

name	LOC100040857 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268204 GeneID:100040857
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475448.1

name	Dscr6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875390 CCDS:CCDS28347.1 GeneID:170765 MGI:2181192
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : mouse homolog of human Down syndrome critical region gene 6 DSCR6 product : Down syndrome critical region homolog 6 protein_id : NP_573492.1

name	Pigp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506539 CCDS:CCDS28348.1 GeneID:56176 MGI:1860433
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0017176 - phosphatidylinositol N-acetylglucosaminyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006506 - GPI anchor biosynthesis [Evidence IEA] codon_start : 1 note : phosphatidylinositol-glycan-class P; Down syndrome critical region gene c; phosphatidylinositol glycan, class P; Down syndrome critical region homolog 5 product : Down syndrome critical region protein c protein_id : NP_062416.1

name	Ttc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678453 GeneID:22129 MGI:1276539
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : tetratricopeptide repeat domain 3 protein_id : NP_033467.1

name	Dscr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681145 CCDS:CCDS28349.1 GeneID:13185 MGI:1206040
definition	GO_process : GO:0006886 - intracellular protein transport [Evidence IEA] codon_start : 1 note : Down syndrome critical region gene a product : Down syndrome critical region protein A protein_id : NP_031860.1

name	Dyrk1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24418935 CCDS:CCDS28350.1 GeneID:13548 MGI:1330299
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004715 - non-membrane spanning protein tyrosine kinase activity [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0018108 - peptidyl-tyrosine phosphorylation [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a protein_id : NP_031916.1

name	Kcnj6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71051589 GeneID:16522 MGI:104781
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015467 - G-protein activated inward rectifier potassium channel activity [Evidence IEA] [Evidence IDA]; GO:0005242 - inward rectifier potassium channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform Girk2-1 is encoded by transcript variant Girk2-1 product : potassium inwardly-rectifying channel J6 isoform Girk2-1 protein_id : NP_001020755.1

name	Kcnj6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71051587 GeneID:16522 MGI:104781
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015467 - G-protein activated inward rectifier potassium channel activity [Evidence IEA] [Evidence IDA]; GO:0005242 - inward rectifier potassium channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform Girk2A-1 is encoded by transcript variant Girk2A-1 product : potassium inwardly-rectifying channel J6 isoform Girk2A-1 protein_id : NP_034736.2

name	Kcnj6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71051593 GeneID:16522 MGI:104781
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015467 - G-protein activated inward rectifier potassium channel activity [Evidence IEA] [Evidence IDA]; GO:0005242 - inward rectifier potassium channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform Girk2C is encoded by transcript variant Girk2C product : potassium inwardly-rectifying channel J6 isoform Girk2C protein_id : NP_001020761.1

name	Kcnj6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71051591 GeneID:16522 MGI:104781
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015467 - G-protein activated inward rectifier potassium channel activity [Evidence IEA] [Evidence IDA]; GO:0005242 - inward rectifier potassium channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform Girk2B is encoded by transcript variant Girk2B product : potassium inwardly-rectifying channel J6 isoform Girk2B protein_id : NP_001020756.1

clone name	MSMg01-260L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382G16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-291M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187P05
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-275B24.b	B6Ng01-275B24.g
ACC	GA076247	GA076248
length	666	1,123
definition	B6Ng01-275B24.b	B6Ng01-275B24.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(94,097,289 - 94,097,954)	(93,991,830 - 93,992,916)
sequence	gaattccacgggaacagcccatgagcccaccctgcccttttaacctcccc agggcacatgctacacaaaacccaggttgaaagagcgcttgcctcttgat ccacagcaatgccagataccacaggcagacagtgaacaaggatagaaagg tcccccttaggaaagctctttttggtaccacctgacattactaaatgaca gatcaggaaatctgatttttaaaagactgtaaaaagtgatcttggaacag agctgaccgcagctgagacgtactgacattaacctcaaaggaaaaaagaa agtaaaaatgtaagtcgagggaagcccacggagggggcttcacgattata cattatcctcgttcataaaagcatgtgaaaacaggttgggcaacgccatc aagactgttaacatttaatatttcaatggtccatggaattagacagtacc tacctgggacaagcctaaatggacagaagcggtctcagatatatacatga ttttgccatcagaggccaccacgaacacaaatccatctagagtctgtaaa gagaaagaaacagtgtgagagactgcagttagacatctcgcagtgaatcc agcaaccagaagactctggactggaggagtccattaaaatgagaagggct gggggcgggggggggg	ccctggttggggaaattcccttgaccatcgacaagaccagcggacccgaa ccagaaccacagccaaataaaccttttctctgacattgcttttgtcaaga tatttcatcatggtgacggtgaaggaagctgagccagtgtctttgacagt ccctggagtcagggattctaagggacggctacactttcaggtcccttggt gggtgacagtgaggtgaaggacactgttgcttttgtggtcaattctgagc aatggcatctccctggccttgtgtattcccagggatggtttctctgaatg actaccatgtccattgtcctgtagggaaacagaatctccaaggagacagg accagggtgggtaattggagcagagagggagctctgggagaagaggccat tctccaggacaggaagttgggtaagcctgcttcatgtcccactccaaagc cttctgagtcagtaggaaggacctctagtcaagaagttgtcaaaaagaaa gaggtggccccacggaaagagcgagaccaggactgaacactcacacagaa ttctgtttccggcctgtccttcagccacattctaggctagacctcttcct gctgaagaggatgacccctcccctcccctgccccatgagcatctacaccc attctccaccatggatagcttccagccagtatatcgctttggatttagga atttcctgtcgagtttattgtaagtgatgacccacaggctctaaagaacc catttgcccttatctctaaaatatccctcacccagtacccaggccttgct ctcccatgaacaagtcagtacccaggccgtgctctcccatgaacaagtca gtacccaggctgtgctctctcccatgaacaagtcagtaccgaggctgtgc tctcccatgaacaagtcagtacccagggccgtgctctccagtgaacaagt cagtacccaggccgtgctctccagtgaacaagtcagtacccagaccttgc tctcccatgaacaagtcagtacccaggccgtgctctcagttgaacaagtc agtacccaaggcgtgcctctctcaagtgaacagtcagtacccaggacggt gctctcctcccatgactaagtca
quality values	Open. Hide. 58 31 30 34 58 62 31 18 62 62 62 62 31 30 56 20 62 62 62 41 47 62 47 47 62 62 62 54 51 62 59 59 43 37 33 38 43 62 62 62 59 51 62 62 62 62 62 62 62 62 59 62 62 54 54 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 59 62 62 62 62 62 59 59 62 54 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 59 59 54 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 49 42 49 49 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 35 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 58 58 58 58 58 58 58 43 58 58 58 58 58 54 58 58 58 54 58 58 58 58 58 58 58 58 54 58 48 58 58 58 58 58 46 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 51 58 58 58 58 51 54 58 58 58 58 58 50 58 51 49 40 58 58 58 58 51 58 58 51 53 46 51 52 58 54 58 58 51 54 54 46 58 58 58 54 51 51 44 41 52 54 51 50 48 49 47 50 58 49 40 49 27 54 53 58 58 58 44 42 54 51 51 58 32 58 49 37 51 44 39 42 54 44 44 58 54 50 49 54 54 44 54 54 47 54 38 33 54 54 54 54 54 54 47 51 54 54 54 54 54 54 54 23 12	Open. Hide. 4 2 4 6 8 4 4 4 5 5 8 7 6 13 9 6 7 7 26 9 16 5 16 6 5 4 4 4 5 9 4 4 5 4 6 21 18 26 19 18 27 52 44 52 52 62 47 36 52 52 56 36 20 28 62 56 62 62 47 49 22 37 49 44 47 62 44 62 56 56 56 45 51 29 38 38 38 35 46 59 46 54 62 62 59 59 62 59 62 62 54 62 62 59 59 59 62 59 62 54 42 54 59 62 62 54 62 59 59 62 59 62 62 54 62 62 59 62 62 62 62 59 62 62 62 62 49 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 59 59 59 62 62 62 62 54 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 54 54 49 49 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 43 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 58 58 58 49 58 58 58 58 54 58 54 58 58 58 49 49 58 58 58 58 58 54 42 41 58 54 58 58 49 49 58 58 58 54 58 52 58 58 58 52 58 54 58 54 54 58 46 46 58 58 58 58 58 58 54 54 58 58 58 54 58 52 58 58 54 58 58 58 54 52 50 58 51 53 58 50 58 58 58 54 51 49 58 58 58 54 49 45 39 58 58 58 58 58 58 58 54 58 53 58 58 58 48 50 58 48 58 45 34 58 49 49 58 41 41 58 58 49 58 58 58 58 58 58 58 51 58 58 58 58 48 47 47 46 58 42 53 39 51 54 52 50 50 52 58 58 48 40 58 58 52 53 54 53 39 53 41 41 30 49 58 31 53 52 51 51 58 50 50 51 37 50 58 47 32 53 52 40 50 40 47 53 53 53 58 58 44 41 53 45 23 36 42 42 41 49 44 24 29 49 27 29 50 40 54 42 51 30 49 45 49 54 41 42 49 54 54 34 52 54 52 52 52 45 34 50 40 37 49 51 45 45 38 31 54 40 47 45 39 29 54 36 30 49 19 33 49 33 40 52 54 47 42 51 54 33 40 31 34 52 53 45 39 33 32 54 54 51 37 32 47 32 53 47 46 33 32 42 53 42 32 29 29 32 32 51 34 31 41 53 45 28 29 25 41 31 45 34 34 31 53 40 25 32 31 29 26 29 24 51 30 31 31 30 31 38 33 31 51 43 31 31 45 31 31 30 24 42 43 38 31 37 34 51 31 32 31 30 41 31 33 36 31 24 42 31 30 29 42 30 22 47 21 14 6 9 18 25 30 22 31 43 42 36 43 32 31 20 46 31 26 28 25 29 31 9 16 41 30 31 29 31 17 26 27 29 35 31 41 30 32 25 29 27 16 26 34 43 36 37 31 39 31 21 31 31 29 39 11 13 35 26 31 31 33 19 18 21 26 47 18 14 18 41 13 29 13 16 12 37 33 29 30 25 18 25 11 8 10 17 32 38 18 20 38 19 28 22 30 25 29 27 14 11 11 21 25 8 14 8 24 22 33 23 30 23 21 19 18 15 16 20 20 26 23 17 19 32 16 32 32 30 18 18 22 14 25 14 18 18 31 10 13 19 16 34 21 27 19 28 27 29 18 13 10 7 20 13 10 10 29 13 29 20 28 20 27 28 19 27 19 16 10 9 18 10 6 5 8 12 16 17 14 13 4 5 6 10 9 15 10 10 16 22 14 11 8 21 13 11 22 19 20 28 9 9 17 9 6 4 12 21 7 7 12 10 8 10 12 23 6 6 3 6 10 21 8 4 15 7 21 5 10 12 6 7 13 29 12 22 10 3 1 2 5 6 4 6 10 5 7 5 5 5 4 8 23 15 9 14 11 22 4 4 11 22 10 22 4 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr16_94097289_94097954
seq2: B6Ng01-275B24.b_46_711 (reverse)

seq1  CCCCCCCCCCGCCCCCAGCCCTTCTCATTTTAATGGACTCCTCCAGTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCGCCCCCAGCCCTTCTCATTTTAATGGACTCCTCCAGTCCA  50

seq1  GAGTCTTCTGGTTGCTGGATTCACTGCGAGATGTCTAACTGCAGTCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTCTGGTTGCTGGATTCACTGCGAGATGTCTAACTGCAGTCTCTC  100

seq1  ACACTGTTTCTTTCTCTTTACAGACTCTAGATGGATTTGTGTTCGTGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTTTCTTTCTCTTTACAGACTCTAGATGGATTTGTGTTCGTGGTG  150

seq1  GCCTCTGATGGCAAAATCATGTATATATCTGAGACCGCTTCTGTCCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGATGGCAAAATCATGTATATATCTGAGACCGCTTCTGTCCATTT  200

seq1  AGGCTTGTCCCAGGTAGGTACTGTCTAATTCCATGGACCATTGAAATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGTCCCAGGTAGGTACTGTCTAATTCCATGGACCATTGAAATATT  250

seq1  AAATGTTAACAGTCTTGATGGCGTTGCCCAACCTGTTTTCACATGCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTAACAGTCTTGATGGCGTTGCCCAACCTGTTTTCACATGCTTTT  300

seq1  ATGAACGAGGATAATGTATAATCGTGAAGCCCCCTCCGTGGGCTTCCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACGAGGATAATGTATAATCGTGAAGCCCCCTCCGTGGGCTTCCCTC  350

seq1  GACTTACATTTTTACTTTCTTTTTTCCTTTGAGGTTAATGTCAGTACGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTACATTTTTACTTTCTTTTTTCCTTTGAGGTTAATGTCAGTACGTC  400

seq1  TCAGCTGCGGTCAGCTCTGTTCCAAGATCACTTTTTACAGTCTTTTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGCGGTCAGCTCTGTTCCAAGATCACTTTTTACAGTCTTTTAAAA  450

seq1  ATCAGATTTCCTGATCTGTCATTTAGTAATGTCAGGTGGTACCAAAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATTTCCTGATCTGTCATTTAGTAATGTCAGGTGGTACCAAAAAGA  500

seq1  GCTTTCCTAAGGGGGACCTTTCTATCCTTGTTCACTGTCTGCCTGTGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCTAAGGGGGACCTTTCTATCCTTGTTCACTGTCTGCCTGTGGTA  550

seq1  TCTGGCATTGCTGTGGATCAAGAGGCAAGCGCTCTTTCAACCTGGGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCATTGCTGTGGATCAAGAGGCAAGCGCTCTTTCAACCTGGGTTTT  600

seq1  GTGTAGCATGTGCCCTGGGGAGGTTAAAAGGGCAGGGTGGGCTCATGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGCATGTGCCCTGGGGAGGTTAAAAGGGCAGGGTGGGCTCATGGGC  650

seq1  TGTTCCCGTGGAATTC  666
      ||||||||||||||||
seq2  TGTTCCCGTGGAATTC  666

seq1: chr16_93991830_93992916
seq2: B6Ng01-275B24.g_34_1123

seq1  AGACCAGCGGACCCGAACCAGAACCACAGCCAAATAAACCTTTTCTCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGCGGACCCGAACCAGAACCACAGCCAAATAAACCTTTTCTCTGA  50

seq1  CATTGCTTTTGTCAAGATATTTCATCATGGTGACGGTGAAGGAAGCTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTTTTGTCAAGATATTTCATCATGGTGACGGTGAAGGAAGCTGAG  100

seq1  CCAGTGTCTTTGACAGTCCCTGGAGTCAGGGATTCTAAGGGACGGCTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGTCTTTGACAGTCCCTGGAGTCAGGGATTCTAAGGGACGGCTACA  150

seq1  CTTTCAGGTCCCTTGGTGGGTGACAGTGAGGTGAAGGACACTGTTGCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGGTCCCTTGGTGGGTGACAGTGAGGTGAAGGACACTGTTGCTTT  200

seq1  TGTGGTCAATTCTGAGCAATGGCATCTCCCTGGCCTTGTGTATTCCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCAATTCTGAGCAATGGCATCTCCCTGGCCTTGTGTATTCCCAGG  250

seq1  GATGGTTTCTCTGAATGACTACCATGTCCATTGTCCTGTAGGGAAACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTTCTCTGAATGACTACCATGTCCATTGTCCTGTAGGGAAACAGA  300

seq1  ATCTCCAAGGAGACAGGACCAGGGTGGGTAATTGGAGCAGAGAGGGAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAAGGAGACAGGACCAGGGTGGGTAATTGGAGCAGAGAGGGAGCT  350

seq1  CTGGGAGAAGAGGCCATTCTCCAGGACAGGAAGTTGGGTAAGCCTGCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGAAGAGGCCATTCTCCAGGACAGGAAGTTGGGTAAGCCTGCTTC  400

seq1  ATGTCCCACTCCAAAGCCTTCTGAGTCAGTAGGAAGGACCTCTAGTCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCACTCCAAAGCCTTCTGAGTCAGTAGGAAGGACCTCTAGTCAAG  450

seq1  AAGTTGTCAAAAAGAAAGAGGTGGCCCCACGGAAAGAGCGAGACCAGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTCAAAAAGAAAGAGGTGGCCCCACGGAAAGAGCGAGACCAGGAC  500

seq1  TGAACACTCACACAGAATTCTGTTTCCGGCCTGTCCTTCAGCCACATTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACTCACACAGAATTCTGTTTCCGGCCTGTCCTTCAGCCACATTCT  550

seq1  AGGCTAGACCTCTTCCTGCTGAAGAGGATGACCCCTCCCCTCCCCTGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGACCTCTTCCTGCTGAAGAGGATGACCCCTCCCCTCCCCTGCCC  600

seq1  CATGAGCATCTACACCCATTCTCCACCATGGATAGCTTCCAGCCAGTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCATCTACACCCATTCTCCACCATGGATAGCTTCCAGCCAGTATA  650

seq1  TCGCTTTGGATTTAGGAATTTCCTGTCGAGTTTATTGTAAGTGATGACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTTTGGATTTAGGAATTTCCTGTCGAGTTTATTGTAAGTGATGACCC  700

seq1  ACAGGCTCTAAAGAACCCATTTGCCCTTATCTCTAAAATATCCCTCACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTCTAAAGAACCCATTTGCCCTTATCTCTAAAATATCCCTCACCC  750

seq1  AGTACCCAGGCCTTGCTCTCCCATGAACAAGTCAGTACCCAGGCCGTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCCAGGCCTTGCTCTCCCATGAACAAGTCAGTACCCAGGCCGTGCT  800

seq1  CTCCCATGAACAAGTCAGTACCCAGGCTGTGCTCTCTCCCATGAACAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATGAACAAGTCAGTACCCAGGCTGTGCTCTCTCCCATGAACAAGT  850

seq1  CAGTACCGAGGCTGTGCTCTCCCATGAACAAGTCAGTACCCA-GGCCGTG  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAGTACCGAGGCTGTGCTCTCCCATGAACAAGTCAGTACCCAGGGCCGTG  900

seq1  CTCTCCAGTGAACAAGTCAGTACCCAGGCCGTGCTCTCCAGTGAACAAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGTGAACAAGTCAGTACCCAGGCCGTGCTCTCCAGTGAACAAGT  950

seq1  CAGTACCCAGACCTTGCTCTCCCATGAACAAGTCAGTACCCAGGCCGTGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACCCAGACCTTGCTCTCCCATGAACAAGTCAGTACCCAGGCCGTGC  1000

seq1  TCTCCAGTGAACAAGTCAGTACCCAGGCCGTG-CTCTCTCCAGTGAACAA  1048
      ||||   |||||||||||||||||| | |||| ||||||| ||||||| |
seq2  TCTCAGTTGAACAAGTCAGTACCCAAGGCGTGCCTCTCTCAAGTGAAC-A  1049

seq1  GTCAGTACCCAGG-CCGTGCTCT-CTCCCATGAACAAGTCA  1087
      ||||||||||||| | ||||||| |||||||||  ||||||
seq2  GTCAGTACCCAGGACGGTGCTCTCCTCCCATGACTAAGTCA  1090

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information