MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-275C11
Chromosome	16 (Build37)
Map Location	48,189,710 - 48,313,799
singlet/doublet	doublet
Overlap gene	EG637273, Dppa4, Dppa2
Upstream gene	LOC628776, EG667741, EG639644
Downstream gene	EG433023, Morc1, Trat1, EG667501, Retnlb, Retnla, Retnlg, 2310047C04Rik, C330027C09Rik, Myh15, 1700026J12Rik, LOC386061
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC628776 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628776
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG667741 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667741 MGI:3646652
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	EG639644 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:639644 MGI:3643404
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 14 Proteins pseudo : _no_value

name	EG637273 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:637273 MGI:3645884
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 608 ESTs, 24 Proteins

name	Dppa4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73693 MGI:2157525
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Dppa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73703 MGI:2157523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG433023 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433023 MGI:3647875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Morc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17450 MGI:1316740
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trat1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77647 MGI:1924897
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667501 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667501 MGI:3643441
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 2 Proteins

name	Retnlb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57263 MGI:1888505
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Retnla (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57262 MGI:1888504
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Retnlg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245195 MGI:2667763
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310047C04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224170 MGI:1917433
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C330027C09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224171 MGI:2146335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myh15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667772 MGI:3643515
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins

name	1700026J12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73255 MGI:1920505
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 2 Proteins

name	LOC386061 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:386061
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	EG667741 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400234 GeneID:667741 MGI:3646652
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : predicted gene, EG667741 transcript_id : XM_992128.1

name	EG637273 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400194 GeneID:637273 MGI:3645884
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 608 ESTs, 24 Proteins product : predicted gene, EG637273, transcript variant 2 transcript_id : XM_001003388.1

name	Dppa4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63079712 GeneID:73693 MGI:2157525
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : developmental pluripotency associated 4 transcript_id : NM_028610.2

name	Dppa4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63079714 GeneID:73693 MGI:2157525
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : developmental pluripotency associated 4 transcript_id : NM_001018002.1

name	Dppa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037334 GeneID:73703 MGI:2157523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : developmental pluripotency associated 2 transcript_id : NM_028615.1

name	EG433023 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400237 GeneID:433023 MGI:3647875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : predicted gene, EG433023 transcript_id : XM_488780.3

name	Morc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7106358 GeneID:17450 MGI:1316740
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microrchidia 1 transcript_id : NM_010816.1

name	Trat1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:79750337 GeneID:77647 MGI:1924897
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T cell receptor associated transmembrane adaptor 1 transcript_id : NM_198297.2

name	EG667501 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400198 GeneID:667501 MGI:3643441
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 2 Proteins product : predicted gene, EG667501 transcript_id : XM_001003424.1

name	Retnlb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802460 GeneID:57263 MGI:1888505
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : resistin like beta transcript_id : NM_023881.3

name	Retnla (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:103472021 GeneID:57262 MGI:1888504
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : resistin like alpha transcript_id : NM_020509.3

name	Retnlg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361567 GeneID:245195 MGI:2667763
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : resistin like gamma transcript_id : NM_181596.3

name	2310047C04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249053 GeneID:224170 MGI:1917433
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310047C04 gene transcript_id : NM_027341.1

name	C330027C09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125858490 GeneID:224171 MGI:2146335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C330027C09 gene transcript_id : NM_172616.2

name	Myh15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267422 GeneID:667772 MGI:3643515
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins product : myosin, heavy chain 15 transcript_id : XM_992311.2

name	EG667741 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94400235 GeneID:667741 MGI:3646652
definition	codon_start : 1 product : hypothetical protein protein_id : XP_997222.1

name	EG637273 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94400195 GeneID:637273 MGI:3645884
definition	codon_start : 1 product : similar to MSP23 isoform 2 protein_id : XP_001003388.1

name	Dppa4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63079713 CCDS:CCDS28209.1 GeneID:73693 MGI:2157525
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : developmental pluripotency associated 4 isoform 1 protein_id : NP_082886.2

name	Dppa4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63079715 CCDS:CCDS28208.1 GeneID:73693 MGI:2157525
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : developmental pluripotency associated 4 isoform 2 protein_id : NP_001018002.1

name	Dppa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037335 GeneID:73703 MGI:2157523
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] codon_start : 1 product : developmental pluripotency-associated 2 protein_id : NP_082891.1

name	EG433023 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51769651 GeneID:433023 MGI:3647875
definition	codon_start : 1 product : similar to hCG2039034 protein_id : XP_488780.1

name	Morc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106359 GeneID:17450 MGI:1316740
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IMP] codon_start : 1 note : microrchidia product : MORC protein_id : NP_034946.1

name	Trat1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:79750338 GeneID:77647 MGI:1924897
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS]; GO:0042101 - T cell receptor complex [Evidence ISS] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0001920 - negative regulation of receptor recycling [Evidence ISS]; GO:0051051 - negative regulation of transport [Evidence ISS]; GO:0050850 - positive regulation of calcium-mediated signaling [Evidence ISS]; GO:0050862 - positive regulation of T cell receptor signaling pathway [Evidence ISS] codon_start : 1 note : T cell receptor interacting molecule; T-cell receptor interacting molecule product : T cell receptor associated transmembrane adaptor 1 protein_id : NP_938039.2

name	EG667501 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94400199 GeneID:667501 MGI:3643441
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001003424.1

name	Retnlb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328327 CCDS:CCDS28210.1 GeneID:57263 MGI:1888505
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA] GO_function : GO:0005179 - hormone activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : found in inflammatory zone 2; resistin-like molecule beta product : resistin like beta protein_id : NP_076370.2

name	Retnla (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:103472022 GeneID:57262 MGI:1888504
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA] GO_function : GO:0005179 - hormone activity [Evidence IEA] codon_start : 1 note : hypoxia-induced mitogenic factor; found in inflammatory zone 1 product : resistin like alpha protein_id : NP_065255.2

name	Retnlg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31711999 GeneID:245195 MGI:2667763
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005179 - hormone activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : RELMgamma; resistin-like molecule gamma product : resistin-like gamma protein_id : NP_853627.1

name	2310047C04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249054 GeneID:224170 MGI:1917433
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : E3 ubiquitin-protein ligase DZIP3 protein_id : NP_081617.1

name	C330027C09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125858491 GeneID:224171 MGI:2146335
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC224171 protein_id : NP_766204.2

name	Myh15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267423 GeneID:667772 MGI:3643515
definition	codon_start : 1 product : similar to hCG1811516 protein_id : XP_997405.2

name	LOC628776 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628776
definition	number : 1 pseudo : _no_value

name	LOC628776 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628776
definition	number : 2 pseudo : _no_value

name	LOC628776 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628776
definition	number : 3 pseudo : _no_value

name	LOC386061 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:386061
definition	number : 5 pseudo : _no_value

name	LOC386061 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:386061
definition	number : 4 pseudo : _no_value

name	LOC386061 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:386061
definition	number : 3 pseudo : _no_value

name	LOC386061 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:386061
definition	number : 2 pseudo : _no_value

name	LOC386061 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:386061
definition	number : 1 pseudo : _no_value

name	EG639644 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94400236 GeneID:639644 MGI:3643404
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 14 Proteins product : predicted gene, EG639644 pseudo : _no_value transcript_id : XR_002068.1

name	1700026J12Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149267424 GeneID:73255 MGI:1920505
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 2 Proteins product : RIKEN cDNA 1700026J12 gene transcript_id : XR_034525.1

clone name	MSMg01-269P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520G16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-064K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424G03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-365P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323I18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-423G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065B03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-275C11.b	B6Ng01-275C11.g
ACC	GA076268	GA076269
length	583	265
definition	B6Ng01-275C11.b	B6Ng01-275C11.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(48,189,710 - 48,190,298)	(48,313,535 - 48,313,799)
sequence	cacacccctaagccccttaccccataaaaacccctagcttccgagccttg tggcagacatccgttatctcctgtgtgggatgcatgtcggtccatagctc cgtcattaaactacctcgtgcaattacatcaagacggtctacctattcgt gattctttgggtgcacgctgaatcgggaattgagtgggggtttccccact aggttctatcaacagcagtctcaataatggcccatctacttgctaaaagc tgtgttgtgctatttgttgtaaaataatagttattgcatcttaacttctc tttcagctatgggaacaatttcatattggccaaagatgccagctgtcatc taattggcagcttagacttcttcatattgaaacccagaggagaaggctaa aatatccaagccatacagagtccatctgagcacttgcgtctcaactcagg ctgtacaaacacagccaaaaggcagtctgagtctaggagtcagctcattt gcaatacaagccaaggcagttttcctcctctggaatagcactgcgaatgt aactgagaagaatggtggggtggggggacgggg	caggacagccagggctacacagagaaaccctgtctcaaaaaaaaagaaag ctttttgttttcctccaattatgaaaaagaaaatgaggaattcacttgac caagatcacagaccccttaaaataggagacctgggacagtaagacatatt tacataataaatcctaataagattctatcttattttaatcatatgcttgc tgtgaatctgccatatgcattctagacagctgaaatattccctctccctt cccctccctccccct
quality values	Open. Hide. 28 16 47 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 44 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 38 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 58 58 58 58 46 34 58 58 54 52 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 51 58 58 58 58 58 58 58 41 49 51 54 51 51 58 58 58 58 49 50 58 50 58 58 58 58 58 58 51 58 58 53 58 58 54 58 58 58 58 49 23 58 58 34 58 41 36 58 49 40 58 58 58 58 52 58 58 58 58 58 58 36 35 54 58 9 5	Open. Hide. 46 36 62 62 59 59 59 54 62 59 59 62 62 59 62 62 62 62 62 62 62 59 59 59 59 62 59 59 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 59 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 34 31 31 13 10

Alignment Information

BAC End 1

BAC End 2

seq1: chr16_48189710_48190298
seq2: B6Ng01-275C11.b_30_618

seq1  GAATTCCACACCCCTAAGCCCCTTACCCCATAAAAACCCCTAGCTTCCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACCCCTAAGCCCCTTACCCCATAAAAACCCCTAGCTTCCGA  50

seq1  GCCTTGTGGCAGACATCCGTTATCTCCTGTGTGGGATGCATGTCGGTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGTGGCAGACATCCGTTATCTCCTGTGTGGGATGCATGTCGGTCCA  100

seq1  TAGCTCCGTCATTAAACTACCTCGTGCAATTACATCAAGACGGTCTACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCCGTCATTAAACTACCTCGTGCAATTACATCAAGACGGTCTACCT  150

seq1  ATTCGTGATTCTTTGGGTGCACGCTGAATCGGGAATTGAGTGGGGGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGTGATTCTTTGGGTGCACGCTGAATCGGGAATTGAGTGGGGGTTTC  200

seq1  CCCACTAGGTTCTATCAACAGCAGTCTCAATAATGGCCCATCTACTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTAGGTTCTATCAACAGCAGTCTCAATAATGGCCCATCTACTTGCT  250

seq1  AAAAGCTGTGTTGTGCTATTTGTTGTAAAATAATAGTTATTGCATCTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTGTGTTGTGCTATTTGTTGTAAAATAATAGTTATTGCATCTTAA  300

seq1  CTTCTCTTTCAGCTATGGGAACAATTTCATATTGGCCAAAGATGCCAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTTTCAGCTATGGGAACAATTTCATATTGGCCAAAGATGCCAGCT  350

seq1  GTCATCTAATTGGCAGCTTAGACTTCTTCATATTGAAACCCAGAGGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTAATTGGCAGCTTAGACTTCTTCATATTGAAACCCAGAGGAGAA  400

seq1  GGCTAAAATATCCAAGCCATACAGAGTCCATCTGAGCACTTGCGTCTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAAATATCCAAGCCATACAGAGTCCATCTGAGCACTTGCGTCTCAA  450

seq1  CTCAGGCTGTACAAACACAGCCAAAAGGCAGTCTGAGTCTAGGAGTCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCTGTACAAACACAGCCAAAAGGCAGTCTGAGTCTAGGAGTCAGC  500

seq1  TCATTTGCAATACAAGCCAAGGCAGTTTTCCTCCTCTGGAATAGCACTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGCAATACAAGCCAAGGCAGTTTTCCTCCTCTGGAATAGCACTGC  550

seq1  GAATGTAACTGAGAAGAATGGTGGGGTGGGGGGACGGGG  589
      |||||||||||||||||||||||||||||||||||||||
seq2  GAATGTAACTGAGAAGAATGGTGGGGTGGGGGGACGGGG  589

seq1: chr16_48313535_48313799
seq2: B6Ng01-275C11.g_68_332 (reverse)

seq1  AGGGGGAGGGAGGGGAAGGGAGAGGGAATATTTCAGCTGTCTAGAATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAGGGAGGGGAAGGGAGAGGGAATATTTCAGCTGTCTAGAATGCA  50

seq1  TATGGCAGATTCACAGCAAGCATATGATTAAAATAAGATAGAATCTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCAGATTCACAGCAAGCATATGATTAAAATAAGATAGAATCTTATT  100

seq1  AGGATTTATTATGTAAATATGTCTTACTGTCCCAGGTCTCCTATTTTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTATTATGTAAATATGTCTTACTGTCCCAGGTCTCCTATTTTAAG  150

seq1  GGGTCTGTGATCTTGGTCAAGTGAATTCCTCATTTTCTTTTTCATAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTGTGATCTTGGTCAAGTGAATTCCTCATTTTCTTTTTCATAATTG  200

seq1  GAGGAAAACAAAAAGCTTTCTTTTTTTTTGAGACAGGGTTTCTCTGTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAACAAAAAGCTTTCTTTTTTTTTGAGACAGGGTTTCTCTGTGTA  250

seq1  GCCCTGGCTGTCCTG  265
      |||||||||||||||
seq2  GCCCTGGCTGTCCTG  265

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information