BAC Information

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BAC

Clone NameB6Ng01-276N12
Chromosome16 (Build37)
Map Location 62,971,195 - 62,972,316
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1
Downstream geneEpha3, LOC100043540
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276N12.bB6Ng01-276N12.g
ACCGA077521GA077522
length1,1171,191
definitionB6Ng01-276N12.b B6Ng01-276N12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagttacctttccagcaccatgtctgcatgcattccaccttgc
ttcccaccatgatgacaatgaacaaaacctttgaactgtaagccagcccc
aattaaatgttttcttttatgagagttgtcatggttatggtcatggtttc
ttttttttttttaaatagcaatataacatgaactaagacactgtcattga
agataatgagatattttaaaaaatgacctcctttgaatgagtgacattca
aatgcagcaattagatatatacgtatgtttatatcattcatatacatata
tgcatctttatatgtatggtgtggctcatgtgcattattcttttctcatc
acataaattacttagattcaactataactctcttttctggaggtagagtt
tccttcattaaaaagcaagcttaaggagtagactaatgaaaaacaagaag
gtttgcccttgccacattctttccacccctctggcagtactgtaatgagt
gcctattactggtttcattgtcaccagctactcatgcaaactacattaaa
tttgttgaaaatggtcattaagacagttaattatttttaaagtgttaact
gattattatacaagtactatgcatttactcattattatttctttccatta
attatacataatcacctaattccttaaagcagatgaattttgttttacta
tgctgttcatttctgctaatttgacttatgagataatcctttgcactaac
catacgtgtgagtctcagagaaacttgataaacattaacttattaatccc
aatgactacttgataacttgggtcttataagcattatcaagatgacaatt
aataatgcttgagtaaacaaagataataaaaccatatgctatgctctaca
tgcaatggaaattatccctgttttccagtgaaagagagaaaataaaacac
acctgggatttaaaattattctgcttatcatatagtgcagaagaatctaa
catcctagctttaataggagaagaaaacacaggcaatattagtatagtca
gctgagtgttcttctgtatagcatctcacatttacaacaccacaactgac
aactggtgcatcagaac
gaattcaatggaaggcaatagagtcagagacagatcatgctctaattgtt
tagggacctaaataaagaacaagttgcacatctgctacaaatgtgaaggc
aggtctaggtccagctcctgcaagccctttggtgggtgattcagtctctg
tgaacccccatgggctcagactgagtttgtgcagtcaatgtggatattga
ttcatgtattttaaacatgtacatttatggtaattactaatgtatcaatg
tgcatctgtctcttgttttcaggtttgtctgcatggctcccattcttttg
cttctcttttcttactacatctgggttgctggatcactgtgttgctttga
gggagcctttaatagttttcataggatttgttcggaccattataatgcac
atgtgcatgtgacaatctgccaagagcaacgtatttgtcccttacagtga
aataggaaaacattacttccatgcattcatctatactttgtcctttatgc
tttactacttttctgatgttttaacgttctcagttttaccatcccctatc
tgtgggaaatattctgcagttagaatgtctgggtaagcacaacgaggaaa
aacctcttgttctcatcacctgagaatgtcttcatttctgctgtttccct
gaaggatagttttgtgatatacataattcaccattgacacttcttctctt
tcagtgggaaaaaatatggcacttcctttttgccactgtggtttcatgtg
ggaaagtaattgtcatttgtcatgttagttcaggctgccataacaggaca
ccatagagcaattctataagcagtaaaatgcagcagttctggaagatgga
caggagatctgtgtgatagcatacaagcatgaacagattctggtagaggt
gccattctggcgtgtagattaccactgttccaaaggttctcttcaatgtg
agaaagagaacaggagaatttctcaaacccctttcgtgaaagcagtagtc
tattgtttcatgaaagtttccaacctttagtgatctaatgacccctctgg
ggcctcagctcttaatggtgatcatgcttgccacgtagtggatgaggcca
catttggagaatcagtgatgccaggaatgagagaacagaattgcttagag
ggggaattggaatctagtttcctctctatcacaccccacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_62971195_62972316
seq2: B6Ng01-276N12.b_45_1161

seq1  GAATTCTCAGTTACCTTTCCAGCACCATGTCTGCATGCATTCCACCTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTTACCTTTCCAGCACCATGTCTGCATGCATTCCACCTTGC  50

seq1  TTCCCACCATGATGACAATGAACAAAACCTTTGAACTGTAAGCCAGCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACCATGATGACAATGAACAAAACCTTTGAACTGTAAGCCAGCCCC  100

seq1  AATTAAATGTTTTCTTTTATGAGAGTTGTCATGGTTATGGTCATGGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATGTTTTCTTTTATGAGAGTTGTCATGGTTATGGTCATGGTTTC  150

seq1  TTTTTTTTTTTTAAATAGCAATATAACATGAACTAAGACACTGTCATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTAAATAGCAATATAACATGAACTAAGACACTGTCATTGA  200

seq1  AGATAATGAGATATTTTAAAAAATGACCTCCTTTGAATGAGTGACATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATGAGATATTTTAAAAAATGACCTCCTTTGAATGAGTGACATTCA  250

seq1  AATGCAGCAATTAGATATATACGTATGTTTATATCATTCATATACATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGCAATTAGATATATACGTATGTTTATATCATTCATATACATATA  300

seq1  TGCATCTTTATATGTATGGTGTGGCTCATGTGCATTATTCTTTTCTCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTTTATATGTATGGTGTGGCTCATGTGCATTATTCTTTTCTCATC  350

seq1  ACATAAATTACTTAGATTCAACTATAACTCTCTTTTCTGGAGGTAGAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAATTACTTAGATTCAACTATAACTCTCTTTTCTGGAGGTAGAGTT  400

seq1  TCCTTCATTAAAAAGCAAGCTTAAGGAGTAGACTAATGAAAAACAAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCATTAAAAAGCAAGCTTAAGGAGTAGACTAATGAAAAACAAGAAG  450

seq1  GTTTGCCCTTGCCACATTCTTTCCACCCCTCTGGCAGTACTGTAATGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCCCTTGCCACATTCTTTCCACCCCTCTGGCAGTACTGTAATGAGT  500

seq1  GCCTATTACTGGTTTCATTGTCACCAGCTACTCATGCAAACTACATTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATTACTGGTTTCATTGTCACCAGCTACTCATGCAAACTACATTAAA  550

seq1  TTTGTTGAAAATGGTCATTAAGACAGTTAATTATTTTTAAAGTGTTAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGAAAATGGTCATTAAGACAGTTAATTATTTTTAAAGTGTTAACT  600

seq1  GATTATTATACAAGTACTATGCATTTACTCATTATTATTTCTTTCCATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTATACAAGTACTATGCATTTACTCATTATTATTTCTTTCCATTA  650

seq1  ATTATACATAATCACCTAATTCCTTAAAGCAGATGAATTTTGTTTTACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACATAATCACCTAATTCCTTAAAGCAGATGAATTTTGTTTTACTA  700

seq1  TGCTGTTCATTTCTGCTAATTTGACTTATGAGATAATCCTTTGCACTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTCATTTCTGCTAATTTGACTTATGAGATAATCCTTTGCACTAAC  750

seq1  CATACGTGTGAGTCTCAGAGAAACTTGATAAACATTAACTTATTAATCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACGTGTGAGTCTCAGAGAAACTTGATAAACATTAACTTATTAATCCC  800

seq1  AATGACTACTTGATAACTTGGGTCTTATAAGCATTATCAAGATGACAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTACTTGATAACTTGGGTCTTATAAGCATTATCAAGATGACAATT  850

seq1  AATAATGCTTGAGTAAACAAAGATAATAAAACCATATGCTATGCTCTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGCTTGAGTAAACAAAGATAATAAAACCATATGCTATGCTCTACA  900

seq1  TGCAATGGAAATTAT-CCTGTTTTCCAGTGAAAGAGAGAAAATAAAACAC  949
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGCAATGGAAATTATCCCTGTTTTCCAGTGAAAGAGAGAAAATAAAACAC  950

seq1  ACCTGGGATTTAAAATTATTCTGCTTATCATATAAGTGCAG-AGAATCTA  998
      ||||||||||||||||||||||||||||||||| ||||||| ||||||||
seq2  ACCTGGGATTTAAAATTATTCTGCTTATCATAT-AGTGCAGAAGAATCTA  999

seq1  ACAATCCTAGCTTTAATAGGAGAAG-AAACACAGGCAAATATTAGTATAG  1047
      || |||||||||||||||||||||| |||||||||| |||||||||||||
seq2  AC-ATCCTAGCTTTAATAGGAGAAGAAAACACAGGC-AATATTAGTATAG  1047

seq1  TTCAAGCTGAAGTG-TCTTCTGTATAGCCATCTCACATTTACACACA-CA  1095
      |   ||||| |||| |||||||||||| ||||||||||||||| ||| ||
seq2  T--CAGCTG-AGTGTTCTTCTGTATAG-CATCTCACATTTACA-ACACCA  1092

seq1  AACCTGAACATACTTGTGCATCAGAAC  1122
       | ||| ||| ||| ||||||||||||
seq2  CAACTG-ACA-ACTGGTGCATCAGAAC  1117