BAC Information

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BAC

Clone NameB6Ng01-277H17
Chromosome16 (Build37)
Map Location 7,124,474 - 7,326,746
singlet/doubletdoublet
Overlap geneA2bp1
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277H17.bB6Ng01-277H17.g
ACCGA077990GA077991
length1,137773
definitionB6Ng01-277H17.b B6Ng01-277H17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,124,474 - 7,125,617)(7,325,975 - 7,326,746)
sequence
gaattcagtggtagtgtttgccttacatatgctactaaatatgttattcc
cactacttctggggggaaaagtaagtaaattaaaaaatatatctttttcc
ctagattgtaaagatttaatgagaaagggagttggaaatatagttgaatg
tcaggaagattatgcaagagcaaggtgcctctttctgcattacactagac
aataaattacttttgcattgtctcctggatggcgaatttacacatttggc
agcttttgatgaaaagaatcgatacactgtctctttaaagggaaattagt
agttacaagaactggcaatacatttagagatttgttgcattttttttgtt
gttgtttgtttgtttcaatagctcacaaggagaccattttctctcagtat
ataagaatacttgtgtgcttaagggaagacagattccaacaatcaggttg
tttgctgtgatttgtatgctctggggatgagaggagttagcaatgtcaga
aaactacacatatagtataaaaagttccagagaggagaatttctttttct
tatctgtctctagtacatggcttggaacagaagctatttagagagacttg
gattatatagaccccccccccttttagaatatgttccataggtcccctca
tttggctgcttcctctcttccttgtcctggggaacatagctcttatcctt
gaatggccttttgaactaattttgtgaaagtcagtctgtcctgaggttgg
atagtgtgcccaggcaccatcctccgcacatgactgcctcacctccatgc
catctgagtcttgatccttggccttggttttctaggccagtctctgagga
taccacttgctggtttccctttcagtacacttttgggtcatctgtccttg
tttgtgatgggaaactcttaaagagatgcaagggaagatattcttagtca
cttgggagcccaaaggatattccatatagattaaatattctttcatactc
tggaagttctccatatcctcaacttaccttactctattctttgctgagtt
agagctgatcatgcttttgaaccacttctcttttggctcttcagaaagca
tgcttgaagtctcgacagatcagtaccttactctatt

gaattctctcttctcccatcccctaacagagaccacaggtcaactgtgaa
agagtttcactcatacaggctaagtgtatctactcttacacagatgttcc
ttggcttaaaacttattgttaagaaaagagtgacaagaggggtgaattac
agttctactgaatctccagccagggcagagacatcactaatcagttttaa
taacacctattggtccgcagtgtcctaaaatgtgcagaattgctctcaac
atgactactggcaactgctgccacttgatgtgagttggtatggtggtgag
aactctatgccctccttgccctcagggttgaggcaaatcagatggaattg
gcttttctacctctgacagaatggaatattagtaattgcatatggcgaag
cccttttaaaagtcgccttttcccgtatcccctctgcatagtttataagt
gacctcttccagtgccactcatcaggagtgaattaattactccttcttca
tgatcttatcatacccatttcaattccctgccagatccttttctctattt
atatgggttttccctgcagaaacccccaaggcaggccaaatcctacttaa
cattttatccatggcacctagtgagacacctgaccctaggcagggactaa
ttagtggagttgagttaaaacaccttaaaaaaaaaagaaaaggatcattc
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatattatatatatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_7124474_7125617
seq2: B6Ng01-277H17.b_45_1181

seq1  GAATTCAGTGGTAGTGTTTGCCTTACATATGCTACTAAATATGTTATTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGGTAGTGTTTGCCTTACATATGCTACTAAATATGTTATTCC  50

seq1  CACTACTTCTGGGGGGAAAAGTAAGTAAATTAAAAAATATATCTTTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACTTCTGGGGGGAAAAGTAAGTAAATTAAAAAATATATCTTTTTCC  100

seq1  CTAGATTGTAAAGATTTAATGAGAAAGGGAGTTGGAAATATAGTTGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTGTAAAGATTTAATGAGAAAGGGAGTTGGAAATATAGTTGAATG  150

seq1  TCAGGAAGATTATGCAAGAGCAAGGTGCCTCTTTCTGCATTACACTAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAGATTATGCAAGAGCAAGGTGCCTCTTTCTGCATTACACTAGAC  200

seq1  AATAAATTACTTTTGCATTGTCTCCTGGATGGCGAATTTACACATTTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTACTTTTGCATTGTCTCCTGGATGGCGAATTTACACATTTGGC  250

seq1  AGCTTTTGATGAAAAGAATCGATACACTGTCTCTTTAAAGGGAAATTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTGATGAAAAGAATCGATACACTGTCTCTTTAAAGGGAAATTAGT  300

seq1  AGTTACAAGAACTGGCAATACATTTAGAGATTTGTTGCATTTTTTTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAAGAACTGGCAATACATTTAGAGATTTGTTGCATTTTTTTTGTT  350

seq1  GTTGTTTGTTTGTTTCAATAGCTCACAAGGAGACCATTTTCTCTCAGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTGTTTGTTTCAATAGCTCACAAGGAGACCATTTTCTCTCAGTAT  400

seq1  ATAAGAATACTTGTGTGCTTAAGGGAAGACAGATTCCAACAATCAGGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAATACTTGTGTGCTTAAGGGAAGACAGATTCCAACAATCAGGTTG  450

seq1  TTTGCTGTGATTTGTATGCTCTGGGGATGAGAGGAGTTAGCAATGTCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGTGATTTGTATGCTCTGGGGATGAGAGGAGTTAGCAATGTCAGA  500

seq1  AAACTACACATATAGTATAAAAAGTTCCAGAGAGGAGAATTTCTTTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACACATATAGTATAAAAAGTTCCAGAGAGGAGAATTTCTTTTTCT  550

seq1  TATCTGTCTCTAGTACATGGCTTGGAACAGAAGCTATTTAGAGAGACTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTCTCTAGTACATGGCTTGGAACAGAAGCTATTTAGAGAGACTTG  600

seq1  GATTATATAGACCCCCCCCCCTTTTAGAATATGTTCCATAGGTCCCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATATAGACCCCCCCCCCTTTTAGAATATGTTCCATAGGTCCCCTCA  650

seq1  TTTGGCTGCTTCCTCTCTTCCTTGTCCTGGGGAACATAGCTCTTATCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTGCTTCCTCTCTTCCTTGTCCTGGGGAACATAGCTCTTATCCTT  700

seq1  GAATGGCCTTTTGAACTAATTTTGTGAAAGTCAGTCTGTCCTGAGGTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCCTTTTGAACTAATTTTGTGAAAGTCAGTCTGTCCTGAGGTTGG  750

seq1  ATAGTGTGCCCAGGCACCATCCTCCGCACATGACTGCCTCACCTCCATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTGCCCAGGCACCATCCTCCGCACATGACTGCCTCACCTCCATGC  800

seq1  CATCTGAGTCTTGATCCTTGGCCTTGGTTTTCTAGGCCAGTCTCTGAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGAGTCTTGATCCTTGGCCTTGGTTTTCTAGGCCAGTCTCTGAGGA  850

seq1  TACCACTTGCTGGTTTCCCTTTCAGTACACTTTTGGGTCATCTGTCCTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACTTGCTGGTTTCCCTTTCAGTACACTTTTGGGTCATCTGTCCTTG  900

seq1  TTTGTGAT-GGAAACTCTTAAAGAGATGC-AGGGAAGATATTCTTAGTCA  948
      |||||||| |||||||||||||||||||| ||||||||||||||||||||
seq2  TTTGTGATGGGAAACTCTTAAAGAGATGCAAGGGAAGATATTCTTAGTCA  950

seq1  CTGGGGAGCCC-AAGGATATTCCATATAGGATTAAATATTCTTTCATACT  997
      || |||||||| |||||||||||||||| |||||||||||||||||||||
seq2  CTTGGGAGCCCAAAGGATATTCCATATA-GATTAAATATTCTTTCATACT  999

seq1  CTGGAAGTTCTCCCATATTCCTCAACTTACCTTACTCTATTCTTTGCTGA  1047
      ||||||||||| ||||| ||||||||||||||||||||||||||||||||
seq2  CTGGAAGTTCT-CCATA-TCCTCAACTTACCTTACTCTATTCTTTGCTGA  1047

seq1  GTTAGAGCTGATCAATGCTTTTGAACCAC-TCTCTTTTGGCTCTTTCAAG  1096
      ||||||||||||| ||||||||||||||| |||||||||||||||   ||
seq2  GTTAGAGCTGATC-ATGCTTTTGAACCACTTCTCTTTTGGCTCTT--CAG  1094

seq1  AAAGCATGCCTTGAGTCTTCCGGACAGATCAAGTAACCCTACTCTATT  1144
      ||||||||| |  |||||    |||||||| ||| ||| |||||||||
seq2  AAAGCATGCTTGAAGTCT---CGACAGATC-AGT-ACCTTACTCTATT  1137


seq1: chr16_7325975_7326746
seq2: B6Ng01-277H17.g_65_835 (reverse)

seq1  ATATATATATATATATATATATATATATATATATATATATATATATATAT  50
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATA-ATATATATATATATATATATATATATATATATATAT  49

seq1  ATATATATATATATATATATATGAATGATCCTTTTCTTTTTTTTTTAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATGAATGATCCTTTTCTTTTTTTTTTAAGG  99

seq1  TGTTTTAACTCAACTCCACTAATTAGTCCCTGCCTAGGGTCAGGTGTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAACTCAACTCCACTAATTAGTCCCTGCCTAGGGTCAGGTGTCTC  149

seq1  ACTAGGTGCCATGGATAAAATGTTAAGTAGGATTTGGCCTGCCTTGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGTGCCATGGATAAAATGTTAAGTAGGATTTGGCCTGCCTTGGGGG  199

seq1  TTTCTGCAGGGAAAACCCATATAAATAGAGAAAAGGATCTGGCAGGGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCAGGGAAAACCCATATAAATAGAGAAAAGGATCTGGCAGGGAAT  249

seq1  TGAAATGGGTATGATAAGATCATGAAGAAGGAGTAATTAATTCACTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGGGTATGATAAGATCATGAAGAAGGAGTAATTAATTCACTCCTG  299

seq1  ATGAGTGGCACTGGAAGAGGTCACTTATAAACTATGCAGAGGGGATACGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTGGCACTGGAAGAGGTCACTTATAAACTATGCAGAGGGGATACGG  349

seq1  GAAAAGGCGACTTTTAAAAGGGCTTCGCCATATGCAATTACTAATATTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGCGACTTTTAAAAGGGCTTCGCCATATGCAATTACTAATATTCC  399

seq1  ATTCTGTCAGAGGTAGAAAAGCCAATTCCATCTGATTTGCCTCAACCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTCAGAGGTAGAAAAGCCAATTCCATCTGATTTGCCTCAACCCTG  449

seq1  AGGGCAAGGAGGGCATAGAGTTCTCACCACCATACCAACTCACATCAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAAGGAGGGCATAGAGTTCTCACCACCATACCAACTCACATCAAGT  499

seq1  GGCAGCAGTTGCCAGTAGTCATGTTGAGAGCAATTCTGCACATTTTAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCAGTTGCCAGTAGTCATGTTGAGAGCAATTCTGCACATTTTAGGA  549

seq1  CACTGCGGACCAATAGGTGTTATTAAAACTGATTAGTGATGTCTCTGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCGGACCAATAGGTGTTATTAAAACTGATTAGTGATGTCTCTGCCC  599

seq1  TGGCTGGAGATTCAGTAGAACTGTAATTCACCCCTCTTGTCACTCTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGAGATTCAGTAGAACTGTAATTCACCCCTCTTGTCACTCTTTTC  649

seq1  TTAACAATAAGTTTTAAGCCAAGGAACATCTGTGTAAGAGTAGATACACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAATAAGTTTTAAGCCAAGGAACATCTGTGTAAGAGTAGATACACT  699

seq1  TAGCCTGTATGAGTGAAACTCTTTCACAGTTGACCTGTGGTCTCTGTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTGTATGAGTGAAACTCTTTCACAGTTGACCTGTGGTCTCTGTTAG  749

seq1  GGGATGGGAGAAGAGAGAATTC  772
      ||||||||||||||||||||||
seq2  GGGATGGGAGAAGAGAGAATTC  771


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