BAC Information

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BAC

Clone NameB6Ng01-277N04
Chromosome16 (Build37)
Map Location 67,693,559 - 67,694,709
singlet/doubletsinglet
Overlap genenone
Upstream geneCadm2, 9330155M09Rik
Downstream geneEG626609
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277N04.bB6Ng01-277N04.g
ACCGA078235GA078236
length1,1531,181
definitionB6Ng01-277N04.b B6Ng01-277N04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctgcaccatgcctgcctggatgctgccatgcttctcattgat
gcttgataataatggactgaatctctgaacctgtaagccagccccaatta
aattttgtcctttataatacttaccttggctatggtgtctactcacagga
gtaaaaatctaagacagaaattggtaataaaccccaataaacttggttca
ccaagattttaaaaaataaaaaagtaaacatcccagtacagtgacataaa
tacaataatagctttattgattggggaaaaatattgaaaatactagtttt
aaaatacaagggtaatattctacataactaagcatggtttttggtacttt
cttatatttttgatttctatttaatttttccactttattattttatgtgc
atgtgtatgtgtgttctgcctgaatgtgaatgtctgagcatcactgcatc
catagtacctggacagtgcataagaggatatcagatctcctagaactgag
tgtatagtcatttttgagccaccatgtgcatgctgggacttgtacccaga
acctctggaagaacaagaaattctcttaactgatgggccatcaattcaaa
tccatggttttgccattttaatgataagtttattacaaaaaatagtacaa
cttcatgaaagaatttgtgagagaatcaccatccctgacatcaagctgta
ctagagaacaatcgttattgaaacttcattgtcttggtacagagacagac
aggttgatcaatggaatagaattgaagactcagaaatagacctgcacact
tatggggcacttgatcttagaaaaagaaaggcaacaatagagaaggggaa
aaaagaaagcatcttcaataaatggtgctgatctaattggcagtcagtat
gtggaaaattaaaatagatccatatttgtcaccttacatatagctcaagt
ccaagtggatctaggatctcaacataaaaccaaatacagtgaatataaaa
gaagaagagagtgggataaagccatgaactcattgtcatggtcaaaattt
ccttaaacaagaactccatgactcaagctagaagatcgagattaataatg
gagactctgaaaattaattgctacctataagcatgacacagttcaattat
gac

gaattctttatctctgtaccccatttttaatagggttattttgtttggag
tctgtactggctagttttgtgtcaacttgacacagctggggttatcacag
agaaaggagcttcagttgagcaaatgcctctatgagatccaactctaagg
cattttctcaattagtgatcaagggaggccccttgtgggtgggaccatct
ctgggctggtagtcttgggttctataagagagcaggctgagcaagccagg
ggaggcaagccagtaaagaacatccctccatggcctctgcataggctcct
gctttctgacctgcttgagttccagtcctgacttccttggtgatgaacag
cagtatggaagtgtaagccgaataaaccctttcctccccaactgcttctt
ggtcatgatgtttgtgcaggaatagaaaccctgactaagacagagtctaa
cttcttgagttctttgtatatattggaaatagacctaaatcagatttagg
gttggtaaagatcttttcccaatttgctcattgctgttttgtcctattca
caatgtcctttgccttagagaagctttgcacatttatgaggtcccatttg
tcattacttgatactagagcacaagttattggtgtactgtttaggaaatt
tttcccggtgcccatgtgctcaaggctcttccccactattagattcagtg
tatctggttttatggggaggtccttgatccacttggacttgagttttgta
caaggtgataagaatggattgatttccattcttctacatgctgatttcca
gttgaaccagcaccaattgttgaaaatgctgtctttttttttctactgga
tggtttagctcctttgtcaaaggtcaagtgaccataggtgtgtggggttc
atttctgggtcttcagttctattccattgatctacctgcctgtcacctgt
accaatacactattattatcatttattattttattatttatcactattgc
ctcctgtagtacagccttgaggtcagccattatgatttccccaaagtttc
cgttatttgtgaaaatagcttcgcctatccatgggtttttttggttattc
tggatgaattgtgagactggctctgcctaaactcctattaagaattggag
tttgaatatttttggtggggggaattttcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_67693559_67694709
seq2: B6Ng01-277N04.b_46_1198

seq1  GAATTCTCCTGCACCATGCCTGCCTGGATGCTGCCATGCTTCTCATTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGCACCATGCCTGCCTGGATGCTGCCATGCTTCTCATTGAT  50

seq1  GCTTGATAATAATGGACTGAATCTCTGAACCTGTAAGCCAGCCCCAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGATAATAATGGACTGAATCTCTGAACCTGTAAGCCAGCCCCAATTA  100

seq1  AATTTTGTCCTTTATAATACTTACCTTGGCTATGGTGTCTACTCACAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGTCCTTTATAATACTTACCTTGGCTATGGTGTCTACTCACAGGA  150

seq1  GTAAAAATCTAAGACAGAAATTGGTAATAAACCCCAATAAACTTGGTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAATCTAAGACAGAAATTGGTAATAAACCCCAATAAACTTGGTTCA  200

seq1  CCAAGATTTTAAAAAATAAAAAAGTAAACATCCCAGTACAGTGACATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATTTTAAAAAATAAAAAAGTAAACATCCCAGTACAGTGACATAAA  250

seq1  TACAATAATAGCTTTATTGATTGGGGAAAAATATTGAAAATACTAGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATAATAGCTTTATTGATTGGGGAAAAATATTGAAAATACTAGTTTT  300

seq1  AAAATACAAGGGTAATATTCTACATAACTAAGCATGGTTTTTGGTACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACAAGGGTAATATTCTACATAACTAAGCATGGTTTTTGGTACTTT  350

seq1  CTTATATTTTTGATTTCTATTTAATTTTTCCACTTTATTATTTTATGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATTTTTGATTTCTATTTAATTTTTCCACTTTATTATTTTATGTGC  400

seq1  ATGTGTATGTGTGTTCTGCCTGAATGTGAATGTCTGAGCATCACTGCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATGTGTGTTCTGCCTGAATGTGAATGTCTGAGCATCACTGCATC  450

seq1  CATAGTACCTGGACAGTGCATAAGAGGATATCAGATCTCCTAGAACTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTACCTGGACAGTGCATAAGAGGATATCAGATCTCCTAGAACTGAG  500

seq1  TGTATAGTCATTTTTGAGCCACCATGTGCATGCTGGGACTTGTACCCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGTCATTTTTGAGCCACCATGTGCATGCTGGGACTTGTACCCAGA  550

seq1  ACCTCTGGAAGAACAAGAAATTCTCTTAACTGATGGGCCATCAATTCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGGAAGAACAAGAAATTCTCTTAACTGATGGGCCATCAATTCAAA  600

seq1  TCCATGGTTTTGCCATTTTAATGATAAGTTTATTACAAAAAATAGTACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGTTTTGCCATTTTAATGATAAGTTTATTACAAAAAATAGTACAA  650

seq1  CTTCATGAAAGAATTTGTGAGAGAATCACCATCCCTGACATCAAGCTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGAAAGAATTTGTGAGAGAATCACCATCCCTGACATCAAGCTGTA  700

seq1  CTAGAGAACAATCGTTATTGAAACTTCATTGTCTTGGTACAGAGACAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAACAATCGTTATTGAAACTTCATTGTCTTGGTACAGAGACAGAC  750

seq1  AGGTTGATCAATGGAATAGAATTGAAGACTCAGAAATAGACCTGCACACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGATCAATGGAATAGAATTGAAGACTCAGAAATAGACCTGCACACT  800

seq1  TATGGGGCACTTGATCTTAGAAAAAG-AAGGCAACAATAGAGAAGGGGAA  849
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TATGGGGCACTTGATCTTAGAAAAAGAAAGGCAACAATAGAGAAGGGGAA  850

seq1  AAAAGAAAGCATCTTCAATAAATGGTGCTGATCTAATTGGCAGTCAGTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAGCATCTTCAATAAATGGTGCTGATCTAATTGGCAGTCAGTAT  900

seq1  GTGGAAAATTAAAATAGATCCATATTTGTCACCTTACATATAGCTCAAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAAATTAAAATAGATCCATATTTGTCACCTTACATATAGCTCAAGT  950

seq1  CCAAGTGGATCTAGGATCTCAACATAAAACCAAATACAGTGAATATAAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGGATCTAGGATCTCAACATAAAACCAAATACAGTGAATATAAAA  1000

seq1  GAAG-AGAGAGTGGGATAAAGCCATGAACTCATTGTCATGGTCAAAATTT  1048
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAGAGTGGGATAAAGCCATGAACTCATTGTCATGGTCAAAATTT  1050

seq1  CC-TAAAC-AGAACTCCAATGACTCAGGCTAGAAGATCGAGAATTAATAA  1096
      || ||||| |||||||| |||||||| |||||||||||||| ||||||||
seq2  CCTTAAACAAGAACTCC-ATGACTCAAGCTAGAAGATCGAG-ATTAATAA  1098

seq1  ATGAGACCTCTGAAAATTAAATGCTA-CTATAAGCAAAGGACACAG-TCA  1144
        |||| ||||||||||||| ||||| ||||||||  | ||||||| |||
seq2  TGGAGA-CTCTGAAAATTAATTGCTACCTATAAGC--ATGACACAGTTCA  1145

seq1  A-TATGAC  1151
      | ||||||
seq2  ATTATGAC  1153


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