BAC Information

Click to search

BAC

Clone NameB6Ng01-277P15
Chromosome16 (Build37)
Map Location 32,501,917 - 32,673,864
singlet/doubletdoublet
Overlap geneZdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265
Upstream geneGm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta
Downstream geneLOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791, Osbpl11, Snx4, Zfp148, Slc12a8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277P15.bB6Ng01-277P15.g
ACCGA078347GA078348
length1,135907
definitionB6Ng01-277P15.b B6Ng01-277P15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,672,752 - 32,673,864)(32,501,917 - 32,502,661)
sequence
gaattcattttgtatatcaggctggcttcaaactcatagaaatcctcctg
tttctgcctccccagtgctggaattaaaggcatgtgccaccatgctcttg
gcatacctctcggtctagacagacccccctagttcatggaaaacctgtgt
cctctatctgccccaaaccctgagactgagcttacagacggagcttacag
agtctaaaactacagagtcagagagttgggaccaggaaacacactaaaga
cagtttcagaaaagagaaatacaaggccgagagacaagagatacggaagt
caggagccagaggaagagagagtcacacagacagacctaatccaacaaga
cactcaacgcccatgcacctggagacatggagacgaggcaggcaaaccaa
cagcaatccgggggtgagaggggagaatgttccaggaaccagaggcacac
aggcccactcctaagagctcagaggctgctggggctcatgtctctcacct
cccacctcctgagcagttctagggaccgagtaaaagctggcacctcagaa
gaaggcagtctagaagttgacccatccgctgtggcagtattagcagctga
agccagcaggagcctggggcggaagggcaagacagggtgcacccaggaca
acctcccagaagagccactcccccggcccctcctacagctggctgtgctc
tcagtgacccagggcactactagagacacacaggaagctcctgagttgcc
ccgagggaacataggctccaaacggagcaggaaataggactggtagagac
ttggggccagaggagcacaggacagaggtggatccgggccttttctggct
ccagtatgtagggatggccacaggccaacttctggctttaagtagtctct
gctaaggtaccgccaagggagggctcccaccccagccccatttcttctat
cttaggctgttcccagattactaatgtccttgccacccccttccctttcc
cctcaaggttccagacccaccatgtggcttccttccctgctttccatgtc
ttacctacaattcctcctcctttcctattctccacccacctctcatctct
ctggtaccttgctagaccatcattcctttccaaga
gaattctctggaccttttgagcagagcacatttcgggatccgtgaatatg
ctctaccgtacacttatttaggctattattgggttttggttacctttcgt
cattattttgtagcttgtggattctgtacccatctcattggatggtaact
tgactaatggctgttttaggaagacaggtagacttattattggggggaac
tagaggcagacaactgaaaggcaggcagacagacagagcatcctctgttt
tgggaaatattaaaaacaaacaaacaaacaaaaaacgaactggcacattc
cagtgcttgtgccagcaactctctgccccagtggcctggccagccatgca
ctggtgggcaatggccgacctgtatttatctcatggagactctgactcag
tgctccaaaagctctccacccagctcgataggttcccattggtagttcac
taccacaccagcaccatgcttcaaatcccacacagcctttgtggtgccct
tagcaaacccacactttgctgtatctctttctctttctctctcttggttt
ttcgagacaggatttctctgtgtagccctggctgtcctggaactcactct
gtagaccaggctgtcctggaactcagaaatccacctgcctctgcctccca
agtgtgccaccactgcctggctgtaccattctctcttgaacccagtcaaa
ccgcctcatgaaaactcgacacagacttagttcagaagtgacagtaactc
aatcactgggcacaacaactaaaatcttaatcttgtaagccttattaaat
ctatatcctctggtggcgaattctgacggatccgccattgaaaccaggag
acactcataattacatcttgtccctcatgctatcacagttccaaaaagac
ttaactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32672752_32673864
seq2: B6Ng01-277P15.b_47_1181 (reverse)

seq1  TCTTGGAACAAGAATGATGTTCTAGC-AGGTTACAGAGA-ATGAGA-GTT  47
      |||||||| | |||||||| |||||| ||||  |||||| |||||| || 
seq2  TCTTGGAA-AGGAATGATGGTCTAGCAAGGTACCAGAGAGATGAGAGGTG  49

seq1  GGTGGAG-ATA-GAAAGGAG--AGAATTGTTAGGTAAGACATGG-AAGCA  92
      ||||||| ||| ||||||||   |||||| |||||||||||||| |||||
seq2  GGTGGAGAATAGGAAAGGAGGAGGAATTG-TAGGTAAGACATGGAAAGCA  98

seq1  -GGAAGG-AGCCACAT-GTGGGTCTGGA--CCTGAGGGG-AAGGGA--GG  134
       |||||| |||||||| |||||||||||  | ||||||| ||||||  ||
seq2  GGGAAGGAAGCCACATGGTGGGTCTGGAACCTTGAGGGGAAAGGGAAGGG  148

seq1  GGTG--CAGGACA-TAGTAATCTGGGAACAGCCTAAGATAGAAG-AATGG  180
      ||||   |||||| |||||||||||||||||||||||||||||| |||||
seq2  GGTGGCAAGGACATTAGTAATCTGGGAACAGCCTAAGATAGAAGAAATGG  198

seq1  GGCT-GGGTGGGAGCCCT-CCTTGGCGGTACC-TAGCAGAGACTACTTAA  227
      |||| ||||||||||||| ||||||||||||| |||||||||||||||||
seq2  GGCTGGGGTGGGAGCCCTCCCTTGGCGGTACCTTAGCAGAGACTACTTAA  248

seq1  AGCCAGAAGTTGGCCTGTGGCCATCCCTACATACTGGAGCCAG-AAAGGC  276
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGCCAGAAGTTGGCCTGTGGCCATCCCTACATACTGGAGCCAGAAAAGGC  298

seq1  CCGGATCCACCTCTGTCCTGTGCTCCTCTGGCCCCAAGTCTCTACCAGTC  326
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGATCCACCTCTGTCCTGTGCTCCTCTGGCCCCAAGTCTCTACCAGTC  348

seq1  CTATTTCCTGCTCCGTTTGGAGCCTATGTTCCCTCGGGGCAACTCAGGAG  376
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCCTGCTCCGTTTGGAGCCTATGTTCCCTCGGGGCAACTCAGGAG  398

seq1  CTTCCTGTGTGTCTCTAGTAGTGCCCTGGGTCACTGAGAGCACAGCCAGC  426
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGTGTGTCTCTAGTAGTGCCCTGGGTCACTGAGAGCACAGCCAGC  448

seq1  TGTAGGAGGGGCCGGGGGAGTGGCTCTTCTGGGAGGTTGTCCTGGGTGCA  476
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGAGGGGCCGGGGGAGTGGCTCTTCTGGGAGGTTGTCCTGGGTGCA  498

seq1  CCCTGTCTTGCCCTTCCGCCCCAGGCTCCTGCTGGCTTCAGCTGCTAATA  526
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTTGCCCTTCCGCCCCAGGCTCCTGCTGGCTTCAGCTGCTAATA  548

seq1  CTGCCACAGCGGATGGGTCAACTTCTAGACTGCCTTCTTCTGAGGTGCCA  576
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACAGCGGATGGGTCAACTTCTAGACTGCCTTCTTCTGAGGTGCCA  598

seq1  GCTTTTACTCGGTCCCTAGAACTGCTCAGGAGGTGGGAGGTGAGAGACAT  626
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTACTCGGTCCCTAGAACTGCTCAGGAGGTGGGAGGTGAGAGACAT  648

seq1  GAGCCCCAGCAGCCTCTGAGCTCTTAGGAGTGGGCCTGTGTGCCTCTGGT  676
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCCAGCAGCCTCTGAGCTCTTAGGAGTGGGCCTGTGTGCCTCTGGT  698

seq1  TCCTGGAACATTCTCCCCTCTCACCCCCGGATTGCTGTTGGTTTGCCTGC  726
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAACATTCTCCCCTCTCACCCCCGGATTGCTGTTGGTTTGCCTGC  748

seq1  CTCGTCTCCATGTCTCCAGGTGCATGGGCGTTGAGTGTCTTGTTGGATTA  776
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTCTCCATGTCTCCAGGTGCATGGGCGTTGAGTGTCTTGTTGGATTA  798

seq1  GGTCTGTCTGTGTGACTCTCTCTTCCTCTGGCTCCTGACTTCCGTATCTC  826
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTCTGTGTGACTCTCTCTTCCTCTGGCTCCTGACTTCCGTATCTC  848

seq1  TTGTCTCTCGGCCTTGTATTTCTCTTTTCTGAAACTGTCTTTAGTGTGTT  876
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTCGGCCTTGTATTTCTCTTTTCTGAAACTGTCTTTAGTGTGTT  898

seq1  TCCTGGTCCCAACTCTCTGACTCTGTAGTTTTAGACTCTGTAAGCTCCGT  926
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGTCCCAACTCTCTGACTCTGTAGTTTTAGACTCTGTAAGCTCCGT  948

seq1  CTGTAAGCTCAGTCTCAGGGTTTGGGGCAGATAGAGGACACAGGTTTTCC  976
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGCTCAGTCTCAGGGTTTGGGGCAGATAGAGGACACAGGTTTTCC  998

seq1  ATGAACTAGGGGGGTCTGTCTAGACCGAGAGGTATGCCAAGAGCATGGTG  1026
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTAGGGGGGTCTGTCTAGACCGAGAGGTATGCCAAGAGCATGGTG  1048

seq1  GCACATGCCTTTAATTCCAGCACTGGGGAGGCAGAAACAGGAGGATTTCT  1076
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGCCTTTAATTCCAGCACTGGGGAGGCAGAAACAGGAGGATTTCT  1098

seq1  ATGAGTTTGAAGCCAGCCTGATATACAAAATGAATTC  1113
      |||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTTGAAGCCAGCCTGATATACAAAATGAATTC  1135

seq1: chr16_32501917_32502661
seq2: B6Ng01-277P15.g_68_812

seq1  GAATTCTCTGGACCTTTTGAGCAGAGCACATTTCGGGATCCGTGAATATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGACCTTTTGAGCAGAGCACATTTCGGGATCCGTGAATATG  50

seq1  CTCTACCGTACACTTATTTAGGCTATTATTGGGTTTTGGTTACCTTTCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACCGTACACTTATTTAGGCTATTATTGGGTTTTGGTTACCTTTCGT  100

seq1  CATTATTTTGTAGCTTGTGGATTCTGTACCCATCTCATTGGATGGTAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTTGTAGCTTGTGGATTCTGTACCCATCTCATTGGATGGTAACT  150

seq1  TGACTAATGGCTGTTTTAGGAAGACAGGTAGACTTATTATTGGGGGGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAATGGCTGTTTTAGGAAGACAGGTAGACTTATTATTGGGGGGAAC  200

seq1  TAGAGGCAGACAACTGAAAGGCAGGCAGACAGACAGAGCATCCTCTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGCAGACAACTGAAAGGCAGGCAGACAGACAGAGCATCCTCTGTTT  250

seq1  TGGGAAATATTAAAAACAAACAAACAAACAAAAAACGAACTGGCACATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAATATTAAAAACAAACAAACAAACAAAAAACGAACTGGCACATTC  300

seq1  CAGTGCTTGTGCCAGCAACTCTCTGCCCCAGTGGCCTGGCCAGCCATGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTTGTGCCAGCAACTCTCTGCCCCAGTGGCCTGGCCAGCCATGCA  350

seq1  CTGGTGGGCAATGGCCGACCTGTATTTATCTCATGGAGACTCTGACTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGGCAATGGCCGACCTGTATTTATCTCATGGAGACTCTGACTCAG  400

seq1  TGCTCCAAAAGCTCTCCACCCAGCTCGATAGGTTCCCATTGGTAGTTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCAAAAGCTCTCCACCCAGCTCGATAGGTTCCCATTGGTAGTTCAC  450

seq1  TACCACACCAGCACCATGCTTCAAATCCCACACAGCCTTTGTGGTGCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACACCAGCACCATGCTTCAAATCCCACACAGCCTTTGTGGTGCCCT  500

seq1  TAGCAAACCCACACTTTGCTGTATCTCTTTCTCTTTCTCTCTCTTGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAACCCACACTTTGCTGTATCTCTTTCTCTTTCTCTCTCTTGGTTT  550

seq1  TTCGAGACAGGATTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAGACAGGATTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCT  600

seq1  GTAGACCAGGCTGTCCTGGAACTCAGAAATCCACCTGCCTCTGCCTCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCAGGCTGTCCTGGAACTCAGAAATCCACCTGCCTCTGCCTCCCA  650

seq1  AGTGTGCCACCACTGCCTGGCTGTACCATTCTCTCTTGAACCCAGTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCCACCACTGCCTGGCTGTACCATTCTCTCTTGAACCCAGTCAAA  700

seq1  CCGCCTCATGAAAACTCGACACAGACTTAGTTCAGAAGTGACAGT  745
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCTCATGAAAACTCGACACAGACTTAGTTCAGAAGTGACAGT  745