BAC Information

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BAC

Clone NameB6Ng01-278E19
Chromosome16 (Build37)
Map Location 69,251,150 - 69,252,330
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626609
Downstream geneSpeer2, EG664930
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278E19.bB6Ng01-278E19.g
ACCGA078583GA078584
length1,1651,184
definitionB6Ng01-278E19.b B6Ng01-278E19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaggttgtaattcacatactagcttcccagactcagatttaga
ctagatctgtaatattaaatatgctgagattccaggtaactaatacaaga
ttagtggactgacccttcattgcttaatctgggagccttcataataaaat
gatatgtagcagtcttttacctaatctcactctgtctcttctgataatct
tgagtaacatagacctgaacgttttatttgattaatttggttaaacttaa
gaaaagagagcatagaagaactttaggtcctctgggaagaatcaagatgc
atgtcttcaataaaatgctaagattcattgctcattgacagaagtgtgca
ctgggaaggaatgaaaagaaaaaaaaaaaaactgatccataaagaaaatt
accatgttgtgtattagccaaacaaaacattgtgaatagctgtgaaattc
attatgttctcaaaggaggtttttatgttccaaaggtttatttagagttt
actttggttttaaaaattaatattcaatttattaaagtaacaaatcctga
aactagttcttccttaagcttttaagctctacatatgaatattatatttc
taaaactagtaagtttttacacctattttaataggtttttgaataatgtt
tggtaccatttacaaatggttaattaaacaccttcaacattttaagctgc
actcataaatttaatatattcaatttctttttaagtattccaattgtcta
attagcaaataaaaccttctgaatagttaaagaactcatataaatttaaa
atggtaggctaaaccttatggtttcttcagtgttacaaagtgaaattggt
aaacacacagtttctcaattgtactaattaaaattagattcatgctatat
tcatataggtaatctgttgctttactaaaattccaaacttttaaataaat
tggaagtatccagatactaatgcaaatatataacaggatttggtaatcat
atttaaaattaaaatttctcattagtgatgatacaataaaatactgtcta
aaatttgccttctcagaaaaaataaatatcttttctggaattcctgaatg
ttgttatccatttacatcatcctaggatcctagtaactttagtcaaccga
gattatcctgcaagc
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatagctaagatcaaaaactcaggtgacagc
agatgttggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacataatactaccggaggatcccgcaatatctctcctgggc
atatatccagaagatgtcccaacgggtaagaaggacacatgctccactat
gttcctagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggaatcagaaaatggtacatttacacaatgga
atactactcagctatttaaaaaatgaatttatgaaattcctaggcaaatg
gatggacctggagggtatcatcctgagtgaagtaacccaaacacaaagga
actagaacaatatgtactcactgataagtggatattagcccagaaactta
ggatacccaagatataagatacaacttggcaaacgcatgaaattcaagaa
gaacgaagaccaaagtgtggacacgttaccctttcttagaaatgggaaca
aaacacccatagaaggagttacagagacaaaatttggagctgtgactaaa
ggatggaccatctagtgactgccatatgcagggatccatcccataatcag
cttccaaatgctgacaccattgcacacactagcaagatttcgctgaaagg
acccagttatagctctctcttgtgagactatgctggggcctagcaaacac
agaagtggatgatcacagtcagctattggatgggtcacatggcccctaat
ggaggagctaggagaaattaccaaggagctatagggactgcaccctatag
gtggacacaatatgactaccagtaccgggagctcatgtctttagctgcat
atgtatcaaagatgcctagtaagcatcactgcaaagagaggcccatggac
tgccaccttaatgccaggtacagggtacgcagcctaagggaatgggtgaa
taggaattgggcagtatcacaagcacagttcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_69251150_69252330
seq2: B6Ng01-278E19.b_47_1211 (reverse)

seq1  GCTTGCAAGGTTAATCTCTGTTTGGACTAAAGTTTCCCTTAAGATCTTAG  50
      |||||| ||| ||||||| |||  |||||||||| |   || |||| |||
seq2  GCTTGC-AGGATAATCTCGGTT--GACTAAAGTTAC---TAGGATCCTAG  44

seq1  ATTGAATGTTTAAATGATAAACAACA-TCAGGAATTCCAG-AAAGATATT  98
        |||   | ||||||   ||||||| ||||||||||||| |||||||||
seq2  GATGA---TGTAAATGGATAACAACATTCAGGAATTCCAGAAAAGATATT  91

seq1  TTATTTTTCTGAGAAGGCAAATTTTTAGACAGTTAATTTTTAATTGTATC  148
      |  |||||||||||||||||| |||||||||||  |||||  ||||||||
seq2  TATTTTTTCTGAGAAGGCAAA-TTTTAGACAGT--ATTTT--ATTGTATC  136

seq1  ATTCACTAATGAGAAATTTTAATTTTTAAAATATGAATTACCAAATCCTG  198
      | ||||||||||||||||||||||||  ||||||| ||||||||||||||
seq2  A-TCACTAATGAGAAATTTTAATTTT--AAATATG-ATTACCAAATCCTG  182

seq1  TTATATATTTGCATTAGTATCTGGATACTTCCAATTTATTTAAAAGTTTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATTTGCATTAGTATCTGGATACTTCCAATTTATTTAAAAGTTTG  232

seq1  GAATTTTAGTAAAGCAACAGATTACCTATATGAATATAGCATGAATCTAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTAGTAAAGCAACAGATTACCTATATGAATATAGCATGAATCTAA  282

seq1  TTTTAATTAGTACAATTGAGAAACTGTGTGTTTACCAATTTCACTTTGTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTAGTACAATTGAGAAACTGTGTGTTTACCAATTTCACTTTGTA  332

seq1  ACACTGAAGAAACCATAAGGTTTAGCCTACCATTTTAAATTTATATGAGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAAGAAACCATAAGGTTTAGCCTACCATTTTAAATTTATATGAGT  382

seq1  TCTTTAACTATTCAGAAGGTTTTATTTGCTAATTAGACAATTGGAATACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAACTATTCAGAAGGTTTTATTTGCTAATTAGACAATTGGAATACT  432

seq1  TAAAAAGAAATTGAATATATTAAATTTATGAGTGCAGCTTAAAATGTTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAAATTGAATATATTAAATTTATGAGTGCAGCTTAAAATGTTGA  482

seq1  AGGTGTTTAATTAACCATTTGTAAATGGTACCAAACATTATTCAAAAACC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTTAATTAACCATTTGTAAATGGTACCAAACATTATTCAAAAACC  532

seq1  TATTAAAATAGGTGTAAAAACTTACTAGTTTTAGAAATATAATATTCATA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAATAGGTGTAAAAACTTACTAGTTTTAGAAATATAATATTCATA  582

seq1  TGTAGAGCTTAAAAGCTTAAGGAAGAACTAGTTTCAGGATTTGTTACTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGCTTAAAAGCTTAAGGAAGAACTAGTTTCAGGATTTGTTACTTT  632

seq1  AATAAATTGAATATTAATTTTTAAAACCAAAGTAAACTCTAAATAAACCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTGAATATTAATTTTTAAAACCAAAGTAAACTCTAAATAAACCT  682

seq1  TTGGAACATAAAAACCTCCTTTGAGAACATAATGAATTTCACAGCTATTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACATAAAAACCTCCTTTGAGAACATAATGAATTTCACAGCTATTC  732

seq1  ACAATGTTTTGTTTGGCTAATACACAACATGGTAATTTTCTTTATGGATC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTTTTGTTTGGCTAATACACAACATGGTAATTTTCTTTATGGATC  782

seq1  AGTTTTTTTTTTTTTCTTTTCATTCCTTCCCAGTGCACACTTCTGTCAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTTTTTTTTTCTTTTCATTCCTTCCCAGTGCACACTTCTGTCAAT  832

seq1  GAGCAATGAATCTTAGCATTTTATTGAAGACATGCATCTTGATTCTTCCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATGAATCTTAGCATTTTATTGAAGACATGCATCTTGATTCTTCCC  882

seq1  AGAGGACCTAAAGTTCTTCTATGCTCTCTTTTCTTAAGTTTAACCAAATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACCTAAAGTTCTTCTATGCTCTCTTTTCTTAAGTTTAACCAAATT  932

seq1  AATCAAATAAAACGTTCAGGTCTATGTTACTCAAGATTATCAGAAGAGAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATAAAACGTTCAGGTCTATGTTACTCAAGATTATCAGAAGAGAC  982

seq1  AGAGTGAGATTAGGTAAAAGACTGCTACATATCATTTTATTATGAAGGCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGATTAGGTAAAAGACTGCTACATATCATTTTATTATGAAGGCT  1032

seq1  CCCAGATTAAGCAATGAAGGGTCAGTCCACTAATCTTGTATTAGTTACCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGATTAAGCAATGAAGGGTCAGTCCACTAATCTTGTATTAGTTACCT  1082

seq1  GGAATCTCAGCATATTTAATATTACAGATCTAGTCTAAATCTGAGTCTGG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTCAGCATATTTAATATTACAGATCTAGTCTAAATCTGAGTCTGG  1132

seq1  GAAGCTAGTATGTGAATTACAACCTCAGAATTC  1181
      |||||||||||||||||||||||||||||||||
seq2  GAAGCTAGTATGTGAATTACAACCTCAGAATTC  1165