BAC Information

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BAC

Clone NameB6Ng01-281F06
Chromosome16 (Build37)
Map Location 66,364,094 - 66,365,152
singlet/doubletsinglet
Overlap genenone
Upstream genePou1f1, Chmp2b, EG383186, Vgll3, LOC664846, LOC100039035
Downstream geneCadm2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281F06.bB6Ng01-281F06.g
ACCGA080836GA080837
length1,1421,060
definitionB6Ng01-281F06.b B6Ng01-281F06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaattcaaaacaaacctgagat
tccacctcacaccagtcagaaaggctaagatcaaagatttaggtgacagc
agatgctggcaaggatgtggacaaagaggaacactcctccattgtaggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttactca
gaaaattggacatagtactactggaggatcctgcaaaacctctcctgggc
atatatccagaagatgttccaaccagtaaggacacatgctccactatgtt
catagcagccttatttataatagccagaagctgaaaagaacccagatgcc
cctcaacagaggaatggatacagaaaatgtggtacattttctggagcact
actcagctattaaaatgaatgaatttatgaaattcctaggcaaatggatg
gacctggagggcatcatcctgagtgaggtaacacaatcacaaaagaactc
aaatgatatgtactcaatgataagtggatattagaccagaaacgtagaat
acccaagatacaacttgcaaaacacatgaaactgaagaagaacgaagacc
aaagtgtggaaactttgctccttcttagaattggggacaatcacccgtgg
aaggagttacagagacaaagtttggagcagatacaaaaggatggaccatc
tagagactgccatacctggggattcatcccacaatcagcttccaaacact
ggcaccattgcatacactagcaagattttgctgaaaggacccagatatag
ctgtctcttgtgagactatgcccggggcctagcaaacacataagtggatg
ctcacagtcagctattggatggatcaagtggcccccagtggaggagctag
agaaagtacccaagagcttaagggtctgcaaacctatagtggaacagcat
atgactacagtcccaagctcatgtctctatcttacatatgatcgagatgg
ctagtgtcatcatggaagagaggtcattggactgcaacctttatggccta
gtacaggtaccagatcaagatggaatgtgctcggtcttgcga
gaattcacaccaagtcactgcccatctggggcatagtaatgaggtgatgg
gcgagcaacaaatcaggtgctgacacgccaagctgagggctacataagca
gcaccattttccgggttctgggtcttccctcctgaagaagcaataaagct
tttgctgcagaagaatccggttgtctgagtgtgttcttgccagcgagaac
aatagctcgggacagctgagaacattgatttatgcattaaaaatgtctac
ataatttttacatctgacatctgacattggatccttgtggtttatgctct
ggtgagaatagaaaatgcaagcaaatcaaagctggacacaaagatctact
ctgggaacaaggctttaacataattataaagacatgcaatatagtaagag
tagtagtcacccttgttgacaggaagggtcatactcctcacatggaggga
aagatttaaaaagaaaatatctaagtacaccatatattatctttgctttg
tttattttaagataaacttttagatttaaaataacacctattataaaaat
aattacaatgtgtaatacttatatcactagcaaaaatattattgatgcag
atcaaaggaatattgggatggtaaggttgttccttctagacatttccagg
aaaactaattcacattatatgaaaagaaaacttagccaagttcttgaccc
ttcgtaaaatgagggagaatcaagcagacaatgttgatggtgaagtaaga
attgatgtcaatagataacctgcagtcctatagcaggccaagccatatac
taacactcacataactaaagtagtaattatgcagatgacccttgggtttt
caattaagaattagaaaatgtagcatgaaaatggcatttactgaaatgaa
aagttaaaggcaagaaacgaaacacggctggtgattacttgagctttgag
atcaagacttggcacaagagtgggtgttctattttttctggatttttttg
atattcttcaacataaatgttacccaagtctaagacgtttgcatatgatc
attttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_66364094_66365152
seq2: B6Ng01-281F06.g_66_1125

seq1  GAATTCACACCAAGTCACTGCCCATCTGGGGCATAGTAATGAGGTGATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACCAAGTCACTGCCCATCTGGGGCATAGTAATGAGGTGATGG  50

seq1  GCGAGCAACAAATCAGGTGCTGACACGCCAAGCTGAGGGCTACATAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGCAACAAATCAGGTGCTGACACGCCAAGCTGAGGGCTACATAAGCA  100

seq1  GCACCATTTTCCGGGTTCTGGGTCTTCCCTCCTGAAGAAGCAATAAAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCATTTTCCGGGTTCTGGGTCTTCCCTCCTGAAGAAGCAATAAAGCT  150

seq1  TTTGCTGCAGAAGAATCCGGTTGTCTGAGTGTGTTCTTGCCAGCGAGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGCAGAAGAATCCGGTTGTCTGAGTGTGTTCTTGCCAGCGAGAAC  200

seq1  AATAGCTCGGGACAGCTGAGAACATTGATTTATGCATTAAAAATGTCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTCGGGACAGCTGAGAACATTGATTTATGCATTAAAAATGTCTAC  250

seq1  ATAATTTTTACATCTGACATCTGACATTGGATCCTTGTGGTTTATGCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTTACATCTGACATCTGACATTGGATCCTTGTGGTTTATGCTCT  300

seq1  GGTGAGAATAGAAAATGCAAGCAAATCAAAGCTGGACACAAAGATCTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGAATAGAAAATGCAAGCAAATCAAAGCTGGACACAAAGATCTACT  350

seq1  CTGGGAACAAGGCTTTAACATAATTATAAAGACATGCAATATAGTAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAACAAGGCTTTAACATAATTATAAAGACATGCAATATAGTAAGAG  400

seq1  TAGTAGTCACCCTTGTTGACAGGAAGGGTCATACTCCTCACATGGAGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGTCACCCTTGTTGACAGGAAGGGTCATACTCCTCACATGGAGGGA  450

seq1  AAGATTTAAAAAGAAAATATCTAAGTACACCATATATTATCTTTGCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTAAAAAGAAAATATCTAAGTACACCATATATTATCTTTGCTTTG  500

seq1  TTTATTTTAAGATAAACTTTTAGATTTAAAATAACACCTATTATAAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTAAGATAAACTTTTAGATTTAAAATAACACCTATTATAAAAAT  550

seq1  AATTACAATGTGTAATACTTATATCACTAGCAAAAATATTATTGATGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAATGTGTAATACTTATATCACTAGCAAAAATATTATTGATGCAG  600

seq1  ATCAAAGGAATATTGGGATGGTAAGGTTGTTCCTTCTAGACATTTCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGGAATATTGGGATGGTAAGGTTGTTCCTTCTAGACATTTCCAGG  650

seq1  AAAACTAATTCACATTATATGAAAAGAAAACTTAGCCAAGTTCTTGACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAATTCACATTATATGAAAAGAAAACTTAGCCAAGTTCTTGACCC  700

seq1  TTCGTAAAATGAGGGAGAATCAAGCAGACAATGTTGATGGTGAAGTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTAAAATGAGGGAGAATCAAGCAGACAATGTTGATGGTGAAGTAAGA  750

seq1  ATTGATGTCAATAGATAACCTGCAGTCCTATAGCAGGCCAAGCCATATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGTCAATAGATAACCTGCAGTCCTATAGCAGGCCAAGCCATATAC  800

seq1  TAACACTCACATAACTAAGGTAGTAATTATGCAGATGACCCTTGGGTTTT  850
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAACACTCACATAACTAAAGTAGTAATTATGCAGATGACCCTTGGGTTTT  850

seq1  CAATTAAGAATTAGAAAATGTAGGCATGAAAATGGCATTTACTGAAATGA  900
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAATTAAGAATTAGAAAATGTA-GCATGAAAATGGCATTTACTGAAATGA  899

seq1  AAAGTTAAAGGCAAGAAACGAAACACGGCTGGTGATTACTTGAGCTTTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTAAAGGCAAGAAACGAAACACGGCTGGTGATTACTTGAGCTTTGA  949

seq1  GATCAAGACTTGGGCACAAGAGTGGGTG-TCTA-TTTTTCTGGATATTTT  998
      ||||||||||| |||||||||||||||| |||| ||||||||||| ||||
seq2  GATCAAGACTT-GGCACAAGAGTGGGTGTTCTATTTTTTCTGGATTTTTT  998

seq1  TGATA-TCTTC-ACATAAATGTTA-CCAAGTCTAAGACGTTTCCATAATG  1045
      ||||| ||||| |||||||||||| ||||||||||||||||| ||| |||
seq2  TGATATTCTTCAACATAAATGTTACCCAAGTCTAAGACGTTTGCAT-ATG  1047

seq1  ATTCATTTTTTTTT  1059
      | ||||||||||||
seq2  A-TCATTTTTTTTT  1060