BAC Information

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BAC

Clone NameB6Ng01-281O07
Chromosome16 (Build37)
Map Location 53,297,745 - 53,298,870
singlet/doubletsinglet
Overlap genenone
Upstream geneAlcam, LOC100043430, LOC667895
Downstream geneLOC433027, LOC100043442
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281O07.bB6Ng01-281O07.g
ACCGA081252GA081253
length1,120818
definitionB6Ng01-281O07.b B6Ng01-281O07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgatgtagtgattctacttctattagtgtaatgaggccaatc
atgactgtcagaattcttgtagtcactaagttacaagcatgttattttta
cctaattacagttacatcatggaataacattttttatttcaaactcttaa
aaaagtgcaaacaaaaaacataagataaaaattggaaaaacgtatacata
tacagataaccttttatattttatagaaaatgtataataactgaacacat
gtcctcactggcctcaatattttatatacatatgttggtaatcaaaatct
ggggtaaactgagatattaatttattgcctataatgatattaagaaaata
tcatttataggcaaagtgttcttcaaaaggagagagtgtgggaaacagta
agatgtggctatgggtgttgttggaagagtaactttactccctattctat
gaacaattatctgctaacctcaacacaattcagtttgactcaggaacaga
gacagcagtcagcttttcagagttgctccgactttgaagtgaagcagcaa
actattattatatctcccgagtgacatagaaattttaagcacattatacc
ctgagtcaaacatggcccaactgcaggtggaaacatgttatgtgtggcat
attttaaaaacctgtcctaataaccgagtaccagagacatttggtatata
aatctgtatcagaaattaaacagtgtattgttgaaatagatgtgtgagca
tgactgaaatgtcctaaactaatgctttcttacaacactattgagcttac
aattttatacatgctaggtagtctttatgagtgtagcatctgacattact
agaagacaaagtttaatgtaaactccctgatattctgggtgttacatgaa
ctgaacaaggaaagtaccaatgagcatgccaaagtagacaaagaaaggct
atgaggcctcacatacaaagcaacaaaatcaacacaaatagcaatctgaa
acaacagccacacaaactcaaacaaaacaacaaaaatcctcgtcttctcc
aggggaaatggcatcaatttgttgtctaaataacaaagtttctgttctgg
aaaccagttaaataaacatt

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtgaatgtggagaaagaggaagactactccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatcaggaagatgccccaactggtaagaaggacacatgctccactat
cttcatagcagccttttttataatagccagaagctggaaagaacccagat
gcccctccacagaggaatggatacagataatgtggtacatctacacaatg
gagtactactcaggtattaaaaagaatgaatttatgaaattcctagccaa
atgtctggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatataatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgccccctccttagaagtgggg
aacaaaaacacccttggaagggagttacagagacaaagtttggaaattga
gatgaagggatgggaccatgtaaagactgcctatccagggatcccaccct
aatctggattcaaacgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_53297745_53298870
seq2: B6Ng01-281O07.b_52_1171

seq1  GAATTCCATGATGTAGTGATTCTACTTCTATTAGTGTAATGAGGCCAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGATGTAGTGATTCTACTTCTATTAGTGTAATGAGGCCAATC  50

seq1  ATGACTGTCAGAATTCTTGTAGTCACTAAGTTACAAGCATGTTATTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGTCAGAATTCTTGTAGTCACTAAGTTACAAGCATGTTATTTTTA  100

seq1  CCTAATTACAGTTACATCATGGAATAACATTTTTTATTTCAAACTCTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTACAGTTACATCATGGAATAACATTTTTTATTTCAAACTCTTAA  150

seq1  AAAAGTGCAAACAAAAAACATAAGATAAAAATTGGAAAAACGTATACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGCAAACAAAAAACATAAGATAAAAATTGGAAAAACGTATACATA  200

seq1  TACAGATAACCTTTTATATTTTATAGAAAATGTATAATAACTGAACACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATAACCTTTTATATTTTATAGAAAATGTATAATAACTGAACACAT  250

seq1  GTCCTCACTGGCCTCAATATTTTATATACATATGTTGGTAATCAAAATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCACTGGCCTCAATATTTTATATACATATGTTGGTAATCAAAATCT  300

seq1  GGGGTAAACTGAGATATTAATTTATTGCCTATAATGATATTAAGAAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTAAACTGAGATATTAATTTATTGCCTATAATGATATTAAGAAAATA  350

seq1  TCATTTATAGGCAAAGTGTTCTTCAAAAGGAGAGAGTGTGGGAAACAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTATAGGCAAAGTGTTCTTCAAAAGGAGAGAGTGTGGGAAACAGTA  400

seq1  AGATGTGGCTATGGGTGTTGTTGGAAGAGTAACTTTACTCCCTATTCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGGCTATGGGTGTTGTTGGAAGAGTAACTTTACTCCCTATTCTAT  450

seq1  GAACAATTATCTGCTAACCTCAACACAATTCAGTTTGACTCAGGAACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATTATCTGCTAACCTCAACACAATTCAGTTTGACTCAGGAACAGA  500

seq1  GACAGCAGTCAGCTTTTCAGAGTTGCTCCGACTTTGAAGTGAAGCAGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAGTCAGCTTTTCAGAGTTGCTCCGACTTTGAAGTGAAGCAGCAA  550

seq1  ACTATTATTATATCTCCCGAGTGACATAGAAATTTTAAGCACATTATACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTATTATATCTCCCGAGTGACATAGAAATTTTAAGCACATTATACC  600

seq1  CTGAGTCAAACATGGCCCAACTGCAGGTGGAAACATGTTATGTGTGGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCAAACATGGCCCAACTGCAGGTGGAAACATGTTATGTGTGGCAT  650

seq1  ATTTTAAAAACCTGTCCTAATAACCGAGTACCAGAGACATTTGGTATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAAACCTGTCCTAATAACCGAGTACCAGAGACATTTGGTATATA  700

seq1  AATCTGTATCAGAAATTAAACAGTGTATTGTTGAAAATAGATGTGTGAGC  750
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AATCTGTATCAGAAATTAAACAGTGTATTGTTG-AAATAGATGTGTGAGC  749

seq1  ATGACTGAAATGTCCTAAACTAATGCTTTCTTACAACACTATTGAGCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGAAATGTCCTAAACTAATGCTTTCTTACAACACTATTGAGCTTA  799

seq1  CAATTTTATACATGCTAGGTAGTCTTTATGAGTGTAGCATCTGACATTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTATACATGCTAGGTAGTCTTTATGAGTGTAGCATCTGACATTAC  849

seq1  TAGAAGACAAAGTTTAATGTAAACTCCCTGATATTCTGGGTGTTACATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGACAAAGTTTAATGTAAACTCCCTGATATTCTGGGTGTTACATGA  899

seq1  ACTGAACAAGGAAAGTACCAATGAGCATGCCAAAGTAGACAAAGAAAGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACAAGGAAAGTACCAATGAGCATGCCAAAGTAGACAAAGAAAGGC  949

seq1  TATGAGGCCTCAACAATACAAAGCAAACAAAATCAACACAAAATAGCAAA  1000
      ||||||||||||   ||||||||| |||||||||||||| ||||||| ||
seq2  TATGAGGCCTCA--CATACAAAGC-AACAAAATCAACAC-AAATAGC-AA  994

seq1  TCTGAAACAACAGCCACACAAACTCAAACAAAAC-ACAAAAATCCTCGTC  1049
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCTGAAACAACAGCCACACAAACTCAAACAAAACAACAAAAATCCTCGTC  1044

seq1  TTCTCCAGGGAAATGGGCATCAATTGTTTGTCT-AATAACAAAAGTTCTG  1098
      |||||||||| ||  ||||||||||  |||||| |||||||||  |||||
seq2  TTCTCCAGGGGAAATGGCATCAATTTGTTGTCTAAATAACAAAGTTTCTG  1094

seq1  TTCTGGAAAACCAAGTTTAAATAACATT  1126
      |||||||||  | |||| ||  ||||||
seq2  TTCTGGAAA--CCAGTTAAATAAACATT  1120


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