BAC Information

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BAC

Clone NameB6Ng01-282D08
Chromosome16 (Build37)
Map Location 50,600,754 - 50,683,464
singlet/doubletdoublet
Overlap geneLOC672778
Upstream geneIft57, LOC667796, LOC100043767, Cd47, EG433024, LOC100043769, LOC628951, EG224180, EG667802, LOC100043404, Bbx, LOC100043414, Ccdc54
Downstream gene5330426P16Rik, EG639820, LOC627543
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282D08.bB6Ng01-282D08.g
ACCGA081486GA081487
length1,123594
definitionB6Ng01-282D08.b B6Ng01-282D08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,682,340 - 50,683,464)(50,600,754 - 50,601,347)
sequence
gaattccaggacatccagggctgttaacacagagaaggttagctcaaaaa
ccaaaaccaaaaacaaacaaacaaaaaaacatactgatgaaataaatatt
tctgagataagagaaaccaggaaaatgtattaccaaagtattgctctaaa
aaatgttgaggggaagtttttttggttttttaatttacatttttaatttt
taaaatttttgagattacaatacaatgacatttgtcccttctccttccac
cctccataccctgctacatagtcctcagaagcaatttgtttagatcaaaa
gataatcagaatatcaggaacaaaagaaaaaaaaacaaaaaagtggaact
atgagttagcatggcttctcctgggcgctttagggtgctcttgatggggt
ctgtgagatgatgcagcaggtaggctcaattgctcccaatagggcaatct
gagtacagtccccagagcccacatcattagagaaaagacctgaatcctcc
aggtaggttatccacacacacacacacaagcacactcgtgctaactcaca
aaataaatgaatgtaacaaaaaaatgcatttgtgagatagaaactaaact
acttcattcttggataatttctgtgaacattgacgtaatagtttggacaa
acctatgaaataaaattgatgaaataaaaatgcctatacagtagtagtaa
acttactttattctagtgcaagtggcaaaatggagtgtctagatggacca
tgaaaaagtaaatactctcaaaaggttgatacctaaactataattaaaga
cagtgagagaaacaataggtaagatagaatgctggaagctccttaaatgc
aaaggatgatggtaaagaaaatatacaataatgaagtaaaaggaagatgg
caaactgtaaagtgcaggcctaagtccagatgcatcagtcactcagcaca
cacagtcaacacacacaaacacaaagagaaagactgtgggaaaagatttt
aatggaaactgggaagcaagttaaaaaaaaataaatggataaaagagggg
ggccctggaagagagaggaggaaaaacttaggtcagtcatatatataata
tatgtatgtatatatatatttaa

gaattcactctgtagaccaggctggcctcaaactcacaaatccacctgcc
tctgcctcccaagtgctgggattaaaggcatgcaccaccaccaccaggtg
ctaagttgtttttagttttgccttttcttctgtgctctttcagcctcact
gttattatcagacacagcatctgttaccttccctcatcattcttggggtc
tgttccttccaaccttcacaagtaacctctccacatgctgagtcacctcc
gtgggctagtgagtcagccatccatggcttgtcttccttctgagatgtca
atagaaccactggctattaatgtagttaatcctgactcactgttgagttg
ttcctttgtctctctgcacattatttatatccacgtttgcttattttaca
tgcataatatcagtggctcggagacgtttcctttttaaaatcttagtttt
acccacagtaggactatgttttttcatttcttatatcctactgattggtg
ggaataagatgatggggtagtgaagtgcctgagactaaatgcagagaata
gaagggagagaaagagagagagagagaaaggagagggaggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_50682340_50683464
seq2: B6Ng01-282D08.b_47_1169 (reverse)

seq1  TTAAATATATATATACATACATATA-TATATATATGACTTGACTTAAGTT  49
      ||||||||||||||||||||||||| |||||||||||| |||| ||||||
seq2  TTAAATATATATATACATACATATATTATATATATGAC-TGACCTAAGTT  49

seq1  TTTCCCTCCCTCTTCTCCTCCCAGTGCCCCCTCTTTTATCCATTTA-TTT  98
      |||||   |||| |||| |||  |  |||||||||||||||||||| |||
seq2  TTTCC--TCCTC-TCTCTTCCAGGGCCCCCCTCTTTTATCCATTTATTTT  96

seq1  TTTTTAACTTGCTT-CCAGTTTCCATTTAAAATCTTTTCCCACAGTCTTT  147
      |||||||||||||| |||||||||| ||||||||||||||||||||||||
seq2  TTTTTAACTTGCTTCCCAGTTTCCA-TTAAAATCTTTTCCCACAGTCTTT  145

seq1  CTCTTTGTGTTTGTGTGTGTTGACTGTGTGTGCTGAGTGACTGATGCATC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGTGTTTGTGTGTGTTGACTGTGTGTGCTGAGTGACTGATGCATC  195

seq1  TGGACTTAGGCCTGCACTTTACAGTTTGCCATCTTCCTTTTACTTCATTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTTAGGCCTGCACTTTACAGTTTGCCATCTTCCTTTTACTTCATTA  245

seq1  TTGTATATTTTCTTTACCATCATCCTTTGCATTTAAGGAGCTTCCAGCAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATATTTTCTTTACCATCATCCTTTGCATTTAAGGAGCTTCCAGCAT  295

seq1  TCTATCTTACCTATTGTTTCTCTCACTGTCTTTAATTATAGTTTAGGTAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTTACCTATTGTTTCTCTCACTGTCTTTAATTATAGTTTAGGTAT  345

seq1  CAACCTTTTGAGAGTATTTACTTTTTCATGGTCCATCTAGACACTCCATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTTTGAGAGTATTTACTTTTTCATGGTCCATCTAGACACTCCATT  395

seq1  TTGCCACTTGCACTAGAATAAAGTAAGTTTACTACTACTGTATAGGCATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCACTTGCACTAGAATAAAGTAAGTTTACTACTACTGTATAGGCATT  445

seq1  TTTATTTCATCAATTTTATTTCATAGGTTTGTCCAAACTATTACGTCAAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCATCAATTTTATTTCATAGGTTTGTCCAAACTATTACGTCAAT  495

seq1  GTTCACAGAAATTATCCAAGAATGAAGTAGTTTAGTTTCTATCTCACAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACAGAAATTATCCAAGAATGAAGTAGTTTAGTTTCTATCTCACAAA  545

seq1  TGCATTTTTTTGTTACATTCATTTATTTTGTGAGTTAGCACGAGTGTGCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTTTTTGTTACATTCATTTATTTTGTGAGTTAGCACGAGTGTGCT  595

seq1  TGTGTGTGTGTGTGTGGATAACCTACCTGGAGGATTCAGGTCTTTTCTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGGATAACCTACCTGGAGGATTCAGGTCTTTTCTCT  645

seq1  AATGATGTGGGCTCTGGGGACTGTACTCAGATTGCCCTATTGGGAGCAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGTGGGCTCTGGGGACTGTACTCAGATTGCCCTATTGGGAGCAAT  695

seq1  TGAGCCTACCTGCTGCATCATCTCACAGACCCCATCAAGAGCACCCTAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTACCTGCTGCATCATCTCACAGACCCCATCAAGAGCACCCTAAA  745

seq1  GCGCCCAGGAGAAGCCATGCTAACTCATAGTTCCACTTTTTTGTTTTTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCCAGGAGAAGCCATGCTAACTCATAGTTCCACTTTTTTGTTTTTTT  795

seq1  TTCTTTTGTTCCTGATATTCTGATTATCTTTTGATCTAAACAAATTGCTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGTTCCTGATATTCTGATTATCTTTTGATCTAAACAAATTGCTT  845

seq1  CTGAGGACTATGTAGCAGGGTATGGAGGGTGGAAGGAGAAGGGACAAATG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGACTATGTAGCAGGGTATGGAGGGTGGAAGGAGAAGGGACAAATG  895

seq1  TCATTGTATTGTAATCTCAAAAATTTTAAAAATTAAAAATGTAAATTAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTATTGTAATCTCAAAAATTTTAAAAATTAAAAATGTAAATTAAA  945

seq1  AAACCAAAAAAACTTCCCCTCAACATTTTTTAGAGCAATACTTTGGTAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAAAAAACTTCCCCTCAACATTTTTTAGAGCAATACTTTGGTAAT  995

seq1  ACATTTTCCTGGTTTCTCTTATCTCAGAAATATTTATTTCATCAGTATGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCCTGGTTTCTCTTATCTCAGAAATATTTATTTCATCAGTATGT  1045

seq1  TTTTTTGTTTGTTTGTTTTTGGTTTTGGTTTTTGAGCTAACCTTCTCTGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTGTTTGTTTTTGGTTTTGGTTTTTGAGCTAACCTTCTCTGT  1095

seq1  GTTAACAGCCCTGGATGTCCTGGAATTC  1125
      ||||||||||||||||||||||||||||
seq2  GTTAACAGCCCTGGATGTCCTGGAATTC  1123


seq1: chr16_50600754_50601347
seq2: B6Ng01-282D08.g_67_660

seq1  GAATTCACTCTGTAGACCAGGCTGGCCTCAAACTCACAAATCCACCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGGCCTCAAACTCACAAATCCACCTGCC  50

seq1  TCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCACCACCACCACCAGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCACCACCACCACCAGGTG  100

seq1  CTAAGTTGTTTTTAGTTTTGCCTTTTCTTCTGTGCTCTTTCAGCCTCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTTGTTTTTAGTTTTGCCTTTTCTTCTGTGCTCTTTCAGCCTCACT  150

seq1  GTTATTATCAGACACAGCATCTGTTACCTTCCCTCATCATTCTTGGGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTATCAGACACAGCATCTGTTACCTTCCCTCATCATTCTTGGGGTC  200

seq1  TGTTCCTTCCAACCTTCACAAGTAACCTCTCCACATGCTGAGTCACCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTTCCAACCTTCACAAGTAACCTCTCCACATGCTGAGTCACCTCC  250

seq1  GTGGGCTAGTGAGTCAGCCATCCATGGCTTGTCTTCCTTCTGAGATGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCTAGTGAGTCAGCCATCCATGGCTTGTCTTCCTTCTGAGATGTCA  300

seq1  ATAGAACCACTGGCTATTAATGTAGTTAATCCTGACTCACTGTTGAGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACCACTGGCTATTAATGTAGTTAATCCTGACTCACTGTTGAGTTG  350

seq1  TTCCTTTGTCTCTCTGCACATTATTTATATCCACGTTTGCTTATTTTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGTCTCTCTGCACATTATTTATATCCACGTTTGCTTATTTTACA  400

seq1  TGCATAATATCAGTGGCTCGGAGACGTTTCCTTTTTAAAATCTTAGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAATATCAGTGGCTCGGAGACGTTTCCTTTTTAAAATCTTAGTTTT  450

seq1  ACCCACAGTAGGACTATGTTTTTTCATTTCTTATATCCTACTGATTGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAGTAGGACTATGTTTTTTCATTTCTTATATCCTACTGATTGGTG  500

seq1  GGAATAAGATGATGGGGTAGTGAAGTGCCTGAGACTAAATGCAGAGAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAAGATGATGGGGTAGTGAAGTGCCTGAGACTAAATGCAGAGAATA  550

seq1  GAAGGGAGAGAAAGAGAGAGAGAGAGAAAGGAGAGGGAGGAGGG  594
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAGAGAAAGAGAGAGAGAGAGAAAGGAGAGGGAGGAGGG  594


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