BAC Information

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BAC

Clone NameB6Ng01-282E03
Chromosome16 (Build37)
Map Location 20,273,650 - 20,274,723
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr164, Olfr165, Olfr166, Olfr167, Olfr168, Olfr169, Olfr170, Olfr171, LOC100043444, Lamp3, B3gnt5, LOC100042935, A930003A15Rik, Klhl6, LOC100042938, Klhl24, Yeats2, LOC100043459, Map6d1
Downstream geneParl, EG224044, Abcc5, Eif2b5, Dvl3, Ap2m1, LOC100042948, Abcf3, BC052055, EG328644, Alg3, 1810009K13Rik, Camk2n2, Ece2, Psmd2, LOC100043475, Eif4g1, 2900046G09Rik, Clcn2, Polr2h, Thpo, Chrd, LOC666255, LOC671504, EG666274, EG625060, LOC625123, LOC676915, 2310042E22Rik, Ephb3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282E03.bB6Ng01-282E03.g
ACCGA081524GA081525
length1,0731,196
definitionB6Ng01-282E03.b B6Ng01-282E03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctagcctgggtacaaccccacccccgcccccacctactcagca
agtcacagtcttctcactgttggattaatgatcttactttctgtatgaat
agtgttctgggattcaggctctgcaggagtgtgaaaggcctttcctgctg
gtcatctatctttatgtgctgtcagtgtttgtctggctaccacccatgca
tccagggagcctacgtagcttgttccaggtaaggggtgggtggtggtgcc
attttctctgactggctggtgtcagatgcaatatccctagctctccatct
gcctctttatttggtgctcgctctgctccagccagctgtgtattcctaac
tctgtctcttggctgttaaatggcagctgccttctttctctagttctccc
tttcctgaaagcacttcattgcaaccatagcaagttctgtcatttagatc
cagatgtgtgacactctgcacaagtgaggacagtgacccgtggcctgctt
tagtccaatgccatacacacatagtatggtctctagctgcttttgcgaag
cccacactaatttgggaaaatcaggtccatgtgtttgatgaaggctctct
gtattgccccaggtgagttttactcaggggttaggttgttgaagctcatg
ataacacaaaagttcccctaagatagtggctatgagttcaaacagtgaaa
ttcatgcaacacaaaattaccattttatgtaaggtttagaaagaggtttt
attctagggatcttaagatgaaggtgttcagagcctctgtctagtcaagg
cagatcttgggaaagaggtgctgttgagtgattcactggggaggtgctct
cttggactgttcatagccttagcacttgagacatgggttgaaatggaatg
gagacagaatactagtgaaaacccagaaatgaatgttctcatgttttaag
aaatatgcttgaatttctaaatagaaaacagttacatcaagaaacattga
acacattcttttccaaactaatgacaataaatgggaaggggtaaggtaat
tgcttccaaagcagcactgaact
gaattcaatcaaagactcagaaataaacccatacacctatggacacttga
tttttgttaaagaggccaaaactatacaatggataatgaaagcatcttca
acaaatggtcctggactaactggatgtctacatgtagaagaaactatatc
cacacttatcaccctgcaaaaaaccgccagtctaagtggattaaggacct
cagcataaaactgaatacacgaaatcttatagaagagaaagagggaaaca
tctttgaatgcattggcacaagagacaattttctgaacagaactccaatg
gctcaggctctatgatcaattgataaatggcacctcaggaaactgctata
aggcaaaggacaatgtcaataagacaaaatatcaacctactgattgggaa
agaatcttcccctatcctacatctgagagagggctaatatccaaaattta
caaagcactcaagaagttagacacccataacccaaataacccaatgaaaa
gattgggttatttgggttatgggcacagagctaaacagacttttcaacag
aggaatctcaaatggtggcgaaacacttaagaaatgttctaagtccttca
ctatcctggagatgcaaatcaaaacaattctgagataacatcttatacca
accagaatggctaaaataaaaaaaaattcaagggatagcctatgctggtg
agaatatggagcaaggggtacactcctccattgctggtgggagtgcaaac
ttgtacacccatattggaaataaatttggctgtttctcagaaaactggga
atagatctacctgaagacctagctataccactcctgggcatatgtccaaa
gatgttccaccatcccacaaagacacttgcttcacctatgtttcatagca
gctttatttgtaatagccagaaaactggggaacaacctagacatcctttc
aactgaagaatagaatacaggaaaatgtgggtacatctacacaatggaaa
tgctgttcagctatgaaagacaaaagggcatccatgaacttgaaattttg
ttaagccaatgaattgggcttggagaaattatcatcttgaagtaaggcca
gctcagttccaatagacattacatgcaatataaattaacctgtacttaca
ggataaatctagcattaaataacgagattgctcactgggagtaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_20273650_20274723
seq2: B6Ng01-282E03.b_44_1116

seq1  GAATTCTCTAGCCTGGGTACAACCCCACCCCCGCCCCCACCTACTCAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGCCTGGGTACAACCCCACCCCCGCCCCCACCTACTCAGCA  50

seq1  AGTCACAGTCTTCTCACTGTTGGATTAATGATCTTACTTTCTGTATGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACAGTCTTCTCACTGTTGGATTAATGATCTTACTTTCTGTATGAAT  100

seq1  AGTGTTCTGGGATTCAGGCTCTGCAGGAGTGTGAAAGGCCTTTCCTGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCTGGGATTCAGGCTCTGCAGGAGTGTGAAAGGCCTTTCCTGCTG  150

seq1  GTCATCTATCTTTATGTGCTGTCAGTGTTTGTCTGGCTACCACCCATGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTATCTTTATGTGCTGTCAGTGTTTGTCTGGCTACCACCCATGCA  200

seq1  TCCAGGGAGCCTACGTAGCTTGTTCCAGGTAAGGGGTGGGTGGTGGTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGAGCCTACGTAGCTTGTTCCAGGTAAGGGGTGGGTGGTGGTGCC  250

seq1  ATTTTCTCTGACTGGCTGGTGTCAGATGCAATATCCCTAGCTCTCCATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTCTGACTGGCTGGTGTCAGATGCAATATCCCTAGCTCTCCATCT  300

seq1  GCCTCTTTATTTGGTGCTCGCTCTGCTCCAGCCAGCTGTGTATTCCTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTTATTTGGTGCTCGCTCTGCTCCAGCCAGCTGTGTATTCCTAAC  350

seq1  TCTGTCTCTTGGCTGTTAAATGGCAGCTGCCTTCTTTCTCTAGTTCTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTTGGCTGTTAAATGGCAGCTGCCTTCTTTCTCTAGTTCTCCC  400

seq1  TTTCCTGAAAGCACTTCATTGCAACCATAGCAAGTTCTGTCATTTAGATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGAAAGCACTTCATTGCAACCATAGCAAGTTCTGTCATTTAGATC  450

seq1  CAGATGTGTGACACTCTGCACAAGTGAGGACAGTGACCCGTGGCCTGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTGTGACACTCTGCACAAGTGAGGACAGTGACCCGTGGCCTGCTT  500

seq1  TAGTCCAATGCCATACACACATAGTATGGTCTCTAGCTGCTTTTGCGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCAATGCCATACACACATAGTATGGTCTCTAGCTGCTTTTGCGAAG  550

seq1  CCCACACTAATTTGGGAAAATCAGGTCCATGTGTTTGATGAAGGCTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACTAATTTGGGAAAATCAGGTCCATGTGTTTGATGAAGGCTCTCT  600

seq1  GTATTGCCCCAGGTGAGTTTTACTCAGGGGTTAGGTTGTTGAAGCTCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGCCCCAGGTGAGTTTTACTCAGGGGTTAGGTTGTTGAAGCTCATG  650

seq1  ATAACACAAAAGTTCCCCTAAGATAGTGGCTATGAGTTCAAACAGTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACAAAAGTTCCCCTAAGATAGTGGCTATGAGTTCAAACAGTGAAA  700

seq1  TTCATGCAACACAAAATTACCATTTTATGTAAGGTTTAGAAAGAGGTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCAACACAAAATTACCATTTTATGTAAGGTTTAGAAAGAGGTTTT  750

seq1  ATTCTAGGGATCTTAAGATGAAGGTGTTCAGAGCCTCTGTCTAGTCAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGGGATCTTAAGATGAAGGTGTTCAGAGCCTCTGTCTAGTCAAGG  800

seq1  CAGATCTTGGGAAAGAGGTGCTGTTGAGTGATTCACTGGGGAGGTGCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTTGGGAAAGAGGTGCTGTTGAGTGATTCACTGGGGAGGTGCTCT  850

seq1  CTTGGACTGTTCATAGCCTTAGCACTTGAGACATGGGTTGAAATGGAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGACTGTTCATAGCCTTAGCACTTGAGACATGGGTTGAAATGGAATG  900

seq1  GAGACAGAATACTAGTGAAAACCCAGAAATGAATGTTCTCATGTTTTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAGACAGAATACTAGTGAAAACCCAGAAATGAATGTTCTCATGTTTT-AA  949

seq1  GAAATATGCTTGAATTTCTAAAATAGAAAACAGTTACATTCAAGAAACAT  1000
      ||||||||||||||||||| |||||||||||||||||| |||||||||||
seq2  GAAATATGCTTGAATTTCT-AAATAGAAAACAGTTACA-TCAAGAAACAT  997

seq1  TGAACACA-TCTTTT-CAAACTAATGACAATAAAATGGGAGGGGTAAGGT  1048
      |||||||| |||||| ||||||||||||||||||  || |||||||||||
seq2  TGAACACATTCTTTTCCAAACTAATGACAATAAATGGGAAGGGGTAAGGT  1047

seq1  AA-TGCTCACAAAGCAGCAACTGAACT  1074
      || ||||  ||||||||| ||||||||
seq2  AATTGCTTCCAAAGCAGC-ACTGAACT  1073