MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-282P15
Chromosome	16 (Build37)
Map Location	5,703,626 - 5,811,394
singlet/doublet	doublet
Overlap gene	LOC100042436
Upstream gene	Dnaja3, Nmral1, Hmox2, 5730403B10Rik, 4930562C15Rik, 1500031H01Rik, Mgrn1, Nudt16l1, Anks3, 4930451G09Rik, Sept12, EG432995, Rogdi, 3930401K13Rik, Ubn1, Ppl, Sec14l5, Nagpa, AU021092, Alg1, 5730409G15Rik
Downstream gene	A2bp1, LOC100042445
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dnaja3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83945 MGI:1933786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nmral1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67824 MGI:1915074
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hmox2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15369 MGI:109373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5730403B10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66626 MGI:1913876
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930562C15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78809 MGI:1926059
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	1500031H01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207740 MGI:1916255
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 83 ESTs, 6 Proteins

name	Mgrn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17237 MGI:2447670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nudt16l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66911 MGI:1914161
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Anks3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72615 MGI:1919865
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930451G09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74684 MGI:1921934
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 16 ESTs, 2 Proteins

name	Sept12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71089 MGI:1918339
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG432995 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432995 MGI:3643379
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Rogdi (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66049 MGI:1913299
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3930401K13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74022 MGI:1921272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ubn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170644 MGI:1891307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19041 MGI:1194898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sec14l5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665119 MGI:3616084
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins

name	Nagpa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27426 MGI:1351598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AU021092 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239691 MGI:2146559
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Alg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208211 MGI:2384774
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5730409G15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70511 MGI:1917761
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042436 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042436
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	A2bp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268859 MGI:1926224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100042445 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042445
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Dnaja3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350102 GeneID:83945 MGI:1933786
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily A, member 3 transcript_id : NM_023646.3

name	Nmral1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24431936 GeneID:67824 MGI:1915074
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NmrA-like family domain containing 1 transcript_id : NM_026393.1

name	Hmox2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754213 GeneID:15369 MGI:109373
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heme oxygenase (decycling) 2 transcript_id : NM_010443.1

name	5730403B10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803220 GeneID:66626 MGI:1913876
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730403B10 gene transcript_id : NM_025670.3

name	4930562C15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267270 GeneID:78809 MGI:1926059
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : RIKEN cDNA 4930562C15 gene transcript_id : XM_974329.2

name	1500031H01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400030 GeneID:207740 MGI:1916255
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 83 ESTs, 6 Proteins product : RIKEN cDNA 1500031H01 gene transcript_id : XM_974374.1

name	Mgrn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130643 GeneID:17237 MGI:2447670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mahogunin, ring finger 1 transcript_id : NM_029657.3

name	Nudt16l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803368 GeneID:66911 MGI:1914161
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 transcript_id : NM_025839.2

name	Anks3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361387 GeneID:72615 MGI:1919865
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and sterile alpha motif domain containing 3 transcript_id : NM_028301.2

name	Sept12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388519 GeneID:71089 MGI:1918339
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : septin 12 transcript_id : NM_027669.2

name	EG432995 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400033 GeneID:432995 MGI:3643379
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : predicted gene, EG432995 transcript_id : XM_488763.3

name	Rogdi (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119508430 GeneID:66049 MGI:1913299
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : rogdi homolog (Drosophila) transcript_id : NM_133185.2

name	3930401K13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119392065 GeneID:74022 MGI:1921272
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3930401K13 gene transcript_id : NM_028720.2

name	3930401K13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119392073 GeneID:74022 MGI:1921272
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3930401K13 gene transcript_id : NM_001079814.1

name	Ubn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368745 GeneID:170644 MGI:1891307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubinuclein 1 transcript_id : NM_026666.3

name	Ppl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112421038 GeneID:19041 MGI:1194898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : periplakin transcript_id : NM_008909.2

name	Sec14l5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267310 GeneID:665119 MGI:3616084
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins product : SEC14-like 5 (S. cerevisiae) transcript_id : XM_974707.2

name	Nagpa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371629 GeneID:27426 MGI:1351598
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase transcript_id : NM_013796.2

name	AU021092 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701617 GeneID:239691 MGI:2146559
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AU021092 transcript_id : NM_001033220.1

name	Alg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703729 GeneID:208211 MGI:2384774
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : asparagine-linked glycosylation 1 homolog (yeast, beta-1,4-mannosyltransferase) transcript_id : NM_145362.1

name	5730409G15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803575 GeneID:70511 MGI:1917761
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730409G15 gene transcript_id : NM_027446.2

name	LOC100042436 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267272 GeneID:100042436
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001478201.1

name	A2bp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130465 GeneID:268859 MGI:1926224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ataxin 2 binding protein 1 transcript_id : NM_021477.4

name	Dnaja3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560085 CCDS:CCDS27922.1 GeneID:83945 MGI:1933786
definition	GO_component : GO:0005829 - cytosol [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005083 - small GTPase regulator activity [Evidence IPI]; GO:0051082 - unfolded protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IPI] codon_start : 1 exception : mismatches in translation product : DnaJ (Hsp40) homolog, subfamily A, member 3 protein_id : NP_076135.2

name	Nmral1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24431937 CCDS:CCDS27923.1 GeneID:67824 MGI:1915074
definition	GO_function : GO:0016564 - transcriptional repressor activity [Evidence IEA] GO_process : GO:0006808 - regulation of nitrogen utilization [Evidence IEA] codon_start : 1 product : NmrA-like family domain containing 1 protein_id : NP_080669.1

name	Hmox2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754214 CCDS:CCDS27924.1 GeneID:15369 MGI:109373
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0004392 - heme oxygenase (decyclizing) activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006788 - heme oxidation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : heme oxygenase (decycling) 2 protein_id : NP_034573.1

name	5730403B10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542001 CCDS:CCDS27925.1 GeneID:66626 MGI:1913876
definition	codon_start : 1 product : hypothetical protein LOC66626 protein_id : NP_079946.2

name	4930562C15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267271 GeneID:78809 MGI:1926059
definition	codon_start : 1 product : hypothetical protein LOC78809 protein_id : XP_979423.2

name	1500031H01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94400031 GeneID:207740 MGI:1916255
definition	codon_start : 1 product : hypothetical protein LOC207740 protein_id : XP_979468.1

name	Mgrn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229238 GeneID:17237 MGI:2447670
definition	GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0000209 - protein polyubiquitination [Evidence IDA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : mahoganoid product : mahogunin, ring finger 1 protein_id : NP_083933.1

name	Nudt16l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385314 CCDS:CCDS27927.1 GeneID:66911 MGI:1914161
definition	codon_start : 1 product : syndesmos protein_id : NP_080115.1

name	Anks3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19072790 CCDS:CCDS27928.1 GeneID:72615 MGI:1919865
definition	codon_start : 1 exception : mismatches in translation product : ankyrin repeat and sterile alpha motif domain containing 3 protein_id : NP_082577.1

name	Sept12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312734 CCDS:CCDS27929.1 GeneID:71089 MGI:1918339
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA] codon_start : 1 product : septin 12 protein_id : NP_081945.1

name	EG432995 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94400034 GeneID:432995 MGI:3643379
definition	codon_start : 1 product : hypothetical protein protein_id : XP_488763.3

name	Rogdi (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119508431 GeneID:66049 MGI:1913299
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0030097 - hemopoiesis [Evidence IDA]; GO:0008284 - positive regulation of cell proliferation [Evidence IDA] codon_start : 1 product : leucine zipper domain protein protein_id : NP_573448.2

name	3930401K13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119392066 CCDS:CCDS27930.1 GeneID:74022 MGI:1921272
definition	GO_function : GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA] GO_process : GO:0006098 - pentose-phosphate shunt [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; cytokine-like nuclear factor n-pac product : cytokine-like nuclear factor n-pac isoform 2 protein_id : NP_082996.2

name	3930401K13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119392074 GeneID:74022 MGI:1921272
definition	GO_function : GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA] GO_process : GO:0006098 - pentose-phosphate shunt [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; cytokine-like nuclear factor n-pac product : cytokine-like nuclear factor n-pac isoform 1 protein_id : NP_001073282.1

name	Ubn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71534247 CCDS:CCDS27931.1 GeneID:170644 MGI:1891307
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0008134 - transcription factor binding [Evidence ISS] GO_process : GO:0030216 - keratinocyte differentiation [Evidence TAS] codon_start : 1 product : ubinuclein 1 protein_id : NP_080942.1

name	Ppl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112421039 CCDS:CCDS27932.1 GeneID:19041 MGI:1194898
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0019897 - extrinsic to plasma membrane [Evidence TAS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0031424 - keratinization [Evidence IEA] codon_start : 1 note : 195kDa protein product : periplakin protein_id : NP_032935.2

name	Sec14l5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267311 GeneID:665119 MGI:3616084
definition	codon_start : 1 product : similar to hCG18754 protein_id : XP_979801.2

name	Nagpa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794508 CCDS:CCDS27933.1 GeneID:27426 MGI:1351598
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003944 - N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : alpha-GlcNAcase product : N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase protein_id : NP_038824.1

name	AU021092 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701618 CCDS:CCDS27934.1 GeneID:239691 MGI:2146559
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC239691 protein_id : NP_001028392.1

name	Alg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703730 GeneID:208211 MGI:2384774
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004578 - chitobiosyldiphosphodolichol beta-mannosyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0009058 - biosynthesis [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : beta-1,4 mannosyltransferase product : beta-1,4-mannosyltransferase protein_id : NP_663337.1

name	5730409G15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74315977 CCDS:CCDS27935.1 GeneID:70511 MGI:1917761
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC70511 protein_id : NP_081722.1

name	LOC100042436 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267273 GeneID:100042436
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478251.1

name	A2bp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66792808 GeneID:268859 MGI:1926224
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform gamma is encoded by transcript variant 2; hexaribonucleotide binding protein 1 product : ataxin 2 binding protein 1 isoform gamma protein_id : NP_067452.2

name	LOC100042445 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042445
definition	number : 2 pseudo : _no_value

name	LOC100042445 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042445
definition	number : 1 pseudo : _no_value

name	4930451G09Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149267305 GeneID:74684 MGI:1921934
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 16 ESTs, 2 Proteins product : RIKEN cDNA 4930451G09 gene transcript_id : XR_034499.1

clone name	MSMg01-451L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515G08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-523D11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-377L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513I13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-541M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223B24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-282P15.b	B6Ng01-282P15.g
ACC	GA082052	GA082053
length	453	1,110
definition	B6Ng01-282P15.b	B6Ng01-282P15.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(5,810,936 - 5,811,394)	(5,703,626 - 5,704,736)
sequence	caaatctactttaagtaattaaacccatttatttccatctgaatacacga tggggttggaggagtttatggacatctggtgaggagcctgtctagataaa caaacactgaagggtggaggggttgggtggggtttctcaatgcaatgccc taagccagcaatagatttctgccagaatggtctggaagttccacaccgta gggacctctctcctgagccctgtgtccatcaagagagcggaagctgagag gcagatccagagactgtatagcaagggaacgagagaaggatcactaatga taatggtgctttcagggggctgtataaatatttcaaaactgaatcaaagc gacagttgcacgctgagattgccctacataacacggaatcacatacttta aaactgtgagttggggtgggggctttagctctactgtccttgcctattac gca	gaattctaacccaagccccccttttacctaactttacccactgagcaatg taccctgcccttaaataacacttcttgaggacagtgtctctgtgaatggt ccatttgccctttgttctcattgagacattgttacatctgaccttgggcc tagaaggtaccaccttccagtctcctcttctgcccagtgaagtggcaggt gccttcttcccagctttcctatactctctggactccactacttcaatgca tcctctagtgagttagtccctttatttgcacctgtagaaccaggatgcca ttattgtttccaaacctggccactgcagttggctcttcatgtctgcagga tgaccctagaagttagctaggtctggcttataaaaatctgtgtccaggta atggcaaggctggacttttgggagctgttatagagagcaatgatcggccc caggctggagtcagggatagtaaaaggaagcaccagcctttgggttcaca agtttgtatctggagggaggtaaatgtactcagtgagtgagagtggacat ggaaggggaatttctcaaggaaagaggcagccttccagaagacaaggcca agggcatagaaataagactgagttgttcaacctcacatcagagccagaat caagtcctgtgagtgaatgtccatttccttgtaggtcctagagctctggg gaagatgtgtaaaatgattggtggcctcaataatattatatgggagctgc tgggaatgtagttcagttgatagaatgcttgtcaaaatgaacaaaatcct gggttccatccccagcactgtataaacaggacatggtggtatacattggt catcccagagctgagagataaaggcagaaaggatgaaaagttcaaagcca tgtttggctgtatagtttgaggctagctttggctacatgagaagctaagt aacctgctgacatcatctgctgagccagcgcagttctaagaacttggtcc atgtctgtttgactccagtctgtctctatgtctactgtttccttcccacc agtttctagctaatggccattggtgtcatccactcccaatcattatctcc caaccacttc
quality values	Open. Hide. 31 10 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 59 62 62 62 62 51 36 22 27 28 28 25 43 43 62 62 46 44 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 59 62 49 42 54 48 62 59 62 62 62 62 62 54 54 62 59 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 49 34 43 15 15 18 34 27 23 40 50 56 43 50 56 50 34 34 18 23 34 27 27 28 34 46 43 46 34 46 46 50 35 43 37 49 41 41 30 21 48 34 34 54 46 39 50 50 48 48 46 51 43 46 33 49 51 40 43 27 27 34 27 30 39 26 50 46 38 49 34 39 24 19 17 16 24 18 30 34 36 24 50 51 43 34 48 43 43 35 37 38 34 43 39 18 27 30 46 23 38 34 39 46 43 59 39 34 48 38 34 51 21 49 27 40 24 13 5 22 29 24 43 30 19 40 24 35 34 34 59 34 27 10 36 19 20 18 19 23 35 23 36 34 39 11 39 19 43 24 49 49 24 49 51 51 43 30 50 34 46 34 27 34 28 16 36 30 23 36 34 13 37 18 12 10 18 14 11 24 49 36 38 36 34 30 18 28 13 18 19 18 12 19 30 30 30 27 21 16 23 34 18 24 39 34 49 34 35 36 17 33 31 10 23 18 43 43 18 26 30 36 31 34 18 22 23 39 39 27 30 10 32 36 33 43 24 27 39 43 38 34 30 43 34 34 34 23 34 10 16 34 23 18 23 13 18 16 36 23 30 40 38 27 21 34 23 34 27 27 34 27 12 19 13 29 16 23 13 27 28 13 34 34 23 23 24 13 18 24 9 13 18 24 43 43 43 30 23 16 34 10 8 18 8 21 12 12 18 18 18 10 21 18 10 8 8 11	Open. Hide. 62 47 51 47 62 62 62 56 62 62 38 39 26 26 27 31 28 28 32 32 35 59 62 62 59 59 59 62 62 62 62 62 62 54 54 62 62 62 59 59 62 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 54 54 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 47 53 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 45 58 54 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 51 58 58 58 58 58 54 54 54 54 58 58 58 58 43 58 58 58 58 54 42 58 58 50 58 53 53 50 47 58 58 47 58 51 58 38 45 50 50 50 47 49 51 53 52 51 51 46 58 49 30 58 32 46 58 49 58 49 28 28 46 38 58 58 49 50 49 58 52 58 58 35 41 51 58 33 58 37 58 58 44 29 58 58 54 50 48 52 50 50 48 58 58 53 50 48 40 58 52 39 29 58 36 58 47 39 53 58 33 33 53 51 49 44 51 50 58 51 58 49 52 53 50 53 51 54 50 41 58 50 39 36 39 50 54 46 39 50 51 51 52 39 52 22 49 34 35 51 39 54 31 44 25 49 49 52 45 34 54 54 46 26 44 18 33 29 53 52 54 42 53 54 54 54 29 46 37 23 38 54 38 32 51 52 53 53 53 33 21 51 33 40 45 45 45 45 46 45 37 37 39 54 54 46 33 26 42 41 45 35 45 52 49 28 26 25 28 51 31 53 31 46 46 32 40 31 53 53 32 41 27 53 25 36 29 32 40 21 34 36 52 31 32 23 51 46 32 31 37 42 29 24 23 46 40 34 29 28 31 31 31 51 51 26 31 29 31 25 38 18 51 41 29 28 33 31 29 26 32 31 30 31 31 28 46 24 31 27 13 21 26 20 30 31 30 46 31 33 46 33 38 34 26 27 29 37 32 42 46 29 38 34 36 32 48 31 31 25 38 22 34 36 23 31 17 39 27 22 18 37 47 30 13 39 18 31 26 31 46 14 19 27 20 22 31 31 48 44 44 27 19 18 26 31 46 37 15 17 24 25 31 31 23 44 17 27 31 17 26 33 11 12 13 13 32 28 43 17 22 25 7 44 21 31 27 28 33 21 44 10 18 5 12 20 23 25 10 10 18 30 12 31 48 22 32 32 24 30 28 34 19 17 7 18 16 28 16 21 19 20 4 6 5 21 16 22 22 31 32 25 8 7 14 13 25 30 24 32 18 18 12 30 32 32 30 25 22 23 17 7 7 21 16 25 15 15 21 8 14 23 6 8 20 20 17 26 27 12 38 29 27 11 5 7 7 29 19 10 6 19 24 5 3 6 9 16 17 21 14 15 19 21 26 17 17 20 25 7 21 25 18 9 8 4 18 29 14 9 5 18 6 3 3 20 14 8 8 18 6 6 6 5 6 16 15 17 17 11 13 18 14 7 4 9 8 5 9 5 20 19 16 10 21 8 14 17 3 1 6 10 15 8 17 10 15 14 8 5 12 21 15 8 5 6 4 22 5 4 7 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr16_5810936_5811394
seq2: B6Ng01-282P15.b_49_507 (reverse)

seq1  TGCGTACTAGGCAAGGACAGTAGAGCTAAAGCCCCCACCCCAACTCACAG  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTAATAGGCAAGGACAGTAGAGCTAAAGCCCCCACCCCAACTCACAG  50

seq1  TTTTAAAGTATGTGATTCCGTGTTATGTAGGGCAATCTCAGCGTGCAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGTATGTGATTCCGTGTTATGTAGGGCAATCTCAGCGTGCAACT  100

seq1  GTCGCTTTGATTCAGTTTTGAAATATTTTTACAGCCCCCTGAAAGCACCA  150
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTCGCTTTGATTCAGTTTTGAAATATTTATACAGCCCCCTGAAAGCACCA  150

seq1  TTCTCATTAGTGATCCTTCTCTCGTTCCCTTGCTCTACAGTCTCTGGATC  200
      || ||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTATCATTAGTGATCCTTCTCTCGTTCCCTTGCTATACAGTCTCTGGATC  200

seq1  TGCCTCTCAGCTTCCGCTCTCTTGATGGACACAGGGCTCAGGAGAGAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTCAGCTTCCGCTCTCTTGATGGACACAGGGCTCAGGAGAGAGGT  250

seq1  CCCTACGGTGTGGAACTTCCAGACCATTCTGGCAGAAATCTATTGCTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACGGTGTGGAACTTCCAGACCATTCTGGCAGAAATCTATTGCTGGC  300

seq1  TTAGGGCATTGCATTGAGAAACCCCACCCAACCCCTCCACCCTTCAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGCATTGCATTGAGAAACCCCACCCAACCCCTCCACCCTTCAGTGT  350

seq1  TTGTTTATCTAGACAGGCTCCTCACCAGATGTCCATAAACTCCTCCAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATCTAGACAGGCTCCTCACCAGATGTCCATAAACTCCTCCAACC  400

seq1  CCATCGTGTATTCAGATGGAAATAAATGGGTTTAATTACTTAAAGTAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCGTGTATTCAGATGGAAATAAATGGGTTTAATTACTTAAAGTAGAT  450

seq1  TTGGAATTC  459
      |||||||||
seq2  TTGGAATTC  459

seq1: chr16_5703626_5704736
seq2: B6Ng01-282P15.g_67_1176

seq1  GAATTCTAACCCAAGCCCCCCTTTTACCTAACTTTACCCACTGAGCAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACCCAAGCCCCCCTTTTACCTAACTTTACCCACTGAGCAATG  50

seq1  TACCCTGCCCTTAAATAACACTTCTTGAGGACAGTGTCTCTGTGAATGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTGCCCTTAAATAACACTTCTTGAGGACAGTGTCTCTGTGAATGGT  100

seq1  CCATTTGCCCTTTGTTCTCATTGAGACATTGTTACATCTGACCTTGGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGCCCTTTGTTCTCATTGAGACATTGTTACATCTGACCTTGGGCC  150

seq1  TAGAAGGTACCACCTTCCAGTCTCCTCTTCTGCCCAGTGAAGTGGCAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGTACCACCTTCCAGTCTCCTCTTCTGCCCAGTGAAGTGGCAGGT  200

seq1  GCCTTCTTCCCAGCTTTCCTATACTCTCTGGACTCCACTACTTCAATGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCTTCCCAGCTTTCCTATACTCTCTGGACTCCACTACTTCAATGCA  250

seq1  TCCTCTAGTGAGTTAGTCCCTTTATTTGCACCTGTAGAACCAGGATGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTAGTGAGTTAGTCCCTTTATTTGCACCTGTAGAACCAGGATGCCA  300

seq1  TTATTGTTTCCAAACCTGGCCACTGCAGTTGGCTCTTCATGTCTGCAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTTTCCAAACCTGGCCACTGCAGTTGGCTCTTCATGTCTGCAGGA  350

seq1  TGACCCTAGAAGTTAGCTAGGTCTGGCTTATAAAAATCTGTGTCCAGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCTAGAAGTTAGCTAGGTCTGGCTTATAAAAATCTGTGTCCAGGTA  400

seq1  ATGGCAAGGCTGGACTTTTGGGAGCTGTTATAGAGAGCAATGATCGGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAAGGCTGGACTTTTGGGAGCTGTTATAGAGAGCAATGATCGGCCC  450

seq1  CAGGCTGGAGTCAGGGATAGTAAAAGGAAGCACCAGCCTTTGGGTTCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGGAGTCAGGGATAGTAAAAGGAAGCACCAGCCTTTGGGTTCACA  500

seq1  AGTTTGTATCTGGAGGGAGGTAAATGTACTCAGTGAGTGAGAGTGGACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTATCTGGAGGGAGGTAAATGTACTCAGTGAGTGAGAGTGGACAT  550

seq1  GGAAGGGGAATTTCTCAAGGAAAGAGGCAGCCTTCCAGAAGACAAGGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGGAATTTCTCAAGGAAAGAGGCAGCCTTCCAGAAGACAAGGCCA  600

seq1  AGGGCATAGAAATAAGACTGAGTTGTTCAACCTCACATCAGAGCCAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATAGAAATAAGACTGAGTTGTTCAACCTCACATCAGAGCCAGAAT  650

seq1  CAAGTCCTGTGAGTGAATGTCCATTTCCTTGTAGGTCCTAGAGCTCTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCCTGTGAGTGAATGTCCATTTCCTTGTAGGTCCTAGAGCTCTGGG  700

seq1  GAAGATGTGTAAAATGATTGGTGGCCTCAATAATATTATATGGGAGCTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGTGTAAAATGATTGGTGGCCTCAATAATATTATATGGGAGCTGC  750

seq1  TGGGAATGTAGTTCAGTTGATAGAATGCTTGTCAAAATGAACAAAATCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATGTAGTTCAGTTGATAGAATGCTTGTCAAAATGAACAAAATCCT  800

seq1  GGGTTCCATCCCCAGCACTGTATAAACAGGACATGGTGGTATACATTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCCATCCCCAGCACTGTATAAACAGGACATGGTGGTATACATTGGT  850

seq1  CATCCCAGAGCTGAGAGATAAAGGCAG-AAGGATGAAAAGTTCAAAGCCA  899
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CATCCCAGAGCTGAGAGATAAAGGCAGAAAGGATGAAAAGTTCAAAGCCA  900

seq1  TGTTTGGCTGTATAGTTTGAGGCTAGCTTGGGCTACATGAGAAGCTAAGT  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGTTTGGCTGTATAGTTTGAGGCTAGCTTTGGCTACATGAGAAGCTAAGT  950

seq1  AACCTGCTGACAATCATCTGCTGAGCCAGCGGCAGTTCTAAG-ACTTGGT  998
      ||||||||||| |||||||||||||||||| ||||||||||| |||||||
seq2  AACCTGCTGAC-ATCATCTGCTGAGCCAGC-GCAGTTCTAAGAACTTGGT  998

seq1  CCCATGTCTGTTTGACTCCAGTCTGTTCTCTATGTCTACTGTTTCC-TCC  1047
       |||||||||||||||||||||||| |||||||||||||||||||| |||
seq2  -CCATGTCTGTTTGACTCCAGTCTG-TCTCTATGTCTACTGTTTCCTTCC  1046

seq1  CACCAGTTTCTAGCCTATGGCCATT-GTGTCATCCACTCCCCATCATTTA  1096
      ||||||||||||||  ||||||||| ||||||||||||||| |||| |||
seq2  CACCAGTTTCTAGCTAATGGCCATTGGTGTCATCCACTCCCAATCA-TTA  1095

seq1  TCTCCCAACAACTTC  1111
      ||||||||| |||||
seq2  TCTCCCAACCACTTC  1110

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information