BAC Information

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BAC

Clone NameB6Ng01-284F14
Chromosome16 (Build37)
Map Location 79,178,215 - 79,306,593
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039561, Cxadr, Btg3, D16Ertd472e, LOC100039605, 4930570E03Rik, Chodl, Prss7
Downstream geneEG383172, 1700066C05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284F14.bB6Ng01-284F14.g
ACCGA083074GA083075
length1,1771,041
definitionB6Ng01-284F14.b B6Ng01-284F14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,305,415 - 79,306,593)(79,178,215 - 79,179,264)
sequence
gaattctctgaccatgataataacacacaaataaaatataacatataata
tgttatattacacaaaatgtgatataaagggatcttgccatttgaaacta
attcaatgtttaaagtttgttttattaattcattttaatagcatatatct
cctgcagttttatcataggacaagataataacatttccaatattaccttc
attaggtataatgagtcatgtgaaaataaactgatttttgagaaaatctt
gttgatatctagacactaacaaaataatgaggcatctcaacaagtatatt
taaggggacttctaatttctttatagttgcatttaattactttattaaat
ttcaattacatttgtcatattttaattatttaaccctaatatgttttgga
atcttaagcatgaaattaaaattagtaatgctttgaaattagtaatgctt
tcaaaatgatatttacacaataaaactgaaaagtatacttttattttaaa
atgttctgattgtttccacagagcttattgtcacttggtttctaaacttc
aattgattaaaagttagcctctttatttaccattgtgtcacagtggaaag
atattataacagcatttcttgtgcattgggactgatagacaattgatgag
ctttataagaactttctcattcaaatgtatactactatactagaagaagt
caatcactattgcctagatgttcaaaactgaagctactagtatttgctaa
gatgatcacatggttctatatgtcctaagacacagatttcatacactcag
tattgatttttttttgtggtattttgagacagggtttctctgtgtagccc
tggctgtcctggaaactcactctgtagaccaggctgggccttgaactcag
aaatctgcctgcctctgcgccccaagtgctgggattaacgcatgcaccac
cactgcctggccagtattgttattatgctcattaatcagtcgctaccttt
cattctaaataaatgtcttgattttagaaaatgttcacttacattagagt
agctttcttttactatagacagaatatatttgattgtgtggttgactgac
tccaatcaaactagaaaacctgacggtacaattgaaacctgtttgtaacg
gagagttctagcattggctcaatatgt

gaattctattttattaatagtttaattctatccacattcattagattcaa
aatacaagtgaaaagggtgttattttccacagtgatttttatcttggtac
agtctctcctctagttcggtctgctccaaatcagcagatttaactaacta
tgcgaaaaaaaaagaaaaaaaaggttgaaaataatctgtagggcataggt
acacgagttacttagaaatatatatcaaccaattagacattggattcaac
atagtaagtaactcagatacgatgaatgctaatggcgagaaatgcataga
taatgttcaagttctaatgtagaacagtttatgtgacagacatttgcaga
ttttggtatatattcagatggttctgaaaaccctagacacaccataaaac
atgaaggagagaaaatacgtaatagagtttatggtgtgtctgatgatacg
tagatttgaataagaagtaaaaagtagcttttaagacttaacattcttat
aaagaaatcccaagggtaagtcttacgcaaagatgttcattaaaaacaaa
caaacaaacaacctgtctgcctcttccctcaattgggggggggcataact
atctactggaggtggtctctacaggttctatctcccctttgttgggtatt
ttgtcttaatcatcccctttgggtcttgggagcctctctcctccctggag
tctgggactttctagtggctacccctagtttcccacccactactgctaca
tatttctactcaagttcctgaccctctggacttctttcctgtcccttccc
attcctgatccttccccctcccttccgatccctctctccctcctagatcc
cttcctccctctacctcctgtgattattttgctctcccttctatgaagga
ttgaagtatccacactttggtcttatttccttctttaagcttcatatggg
ttgtggatgtattctggctctcaaaaattaaacccagatgtctgttcaaa
gaaagagagggacaaatctgagcagagactgatgaaaagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_79305415_79306593
seq2: B6Ng01-284F14.b_46_1222 (reverse)

seq1  ACATATTGAGCCAATGCTAGGAAATTCTTCCTATAAAACAGAGTTC-ATT  49
      ||||||||||||||||||||  || ||| | |   ||||||  ||| |||
seq2  ACATATTGAGCCAATGCTAG--AACTCTCCGTTACAAACAGGTTTCAATT  48

seq1  GTACGTTCA-GTTTTCTAGGTTTGAATGGAGTCAGGCCAACCACACAATC  98
      ||||  ||| |||||||| |||||| |||||||| | |||||||||||||
seq2  GTACCGTCAGGTTTTCTA-GTTTGATTGGAGTCA-GTCAACCACACAATC  96

seq1  AAATATA-TCTGTCTATAAGTAAAAGAAAGCTACCTCTAATTGTAAGTGA  147
      ||||||| ||||||||| ||||||||||||||| |||||| |||||||||
seq2  AAATATATTCTGTCTAT-AGTAAAAGAAAGCTA-CTCTAA-TGTAAGTGA  143

seq1  ACATTTTTCTAAAATCAAGACATTTATTTAGAATG-AAGGTAGCGACCTG  196
      ||| ||||||||||||||||||||||||||||||| |||||||||| |||
seq2  ACA-TTTTCTAAAATCAAGACATTTATTTAGAATGAAAGGTAGCGA-CTG  191

seq1  ATTAATGAGCAT-ATAACAATACTGGCCAGGCAGTGGTGGTGCATGCGTT  245
      |||||||||||| ||||||||||||||||||||||||||||||||||| |
seq2  ATTAATGAGCATAATAACAATACTGGCCAGGCAGTGGTGGTGCATGCG-T  240

seq1  TAATCCCAGCACTTGGGGCGCAGAGGCAGGCAGATTTCTGAGTTCAAGG-  294
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TAATCCCAGCACTTGGGGCGCAGAGGCAGGCAGATTTCTGAGTTCAAGGC  290

seq1  CCAGCCTGGTCTACAGAGTGAG-TTCCAGGACAGCCAGGGCTACACAGAG  343
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CCAGCCTGGTCTACAGAGTGAGTTTCCAGGACAGCCAGGGCTACACAGAG  340

seq1  AAACCCTGTCTCAAAATACCAC-AAAAAAAATCAATACTGAGTGTATGAA  392
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAACCCTGTCTCAAAATACCACAAAAAAAAATCAATACTGAGTGTATGAA  390

seq1  ATCTGTGTCTTAGGACATATAGAACCATGTGATCATCTTAGCAAATACTA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGTCTTAGGACATATAGAACCATGTGATCATCTTAGCAAATACTA  440

seq1  GTAGCTTCAGTTTTGAACATCTAGGCAATAGTGATTGACTTCTTCTAGTA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTTCAGTTTTGAACATCTAGGCAATAGTGATTGACTTCTTCTAGTA  490

seq1  TAGTAGTATACATTTGAATGAGAAAGTTCTTATAAAGCTCATCAATTGTC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGTATACATTTGAATGAGAAAGTTCTTATAAAGCTCATCAATTGTC  540

seq1  TATCAGTCCCAATGCACAAGAAATGCTGTTATAATATCTTTCCACTGTGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTCCCAATGCACAAGAAATGCTGTTATAATATCTTTCCACTGTGA  590

seq1  CACAATGGTAAATAAAGAGGCTAACTTTTAATCAATTGAAGTTTAGAAAC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGGTAAATAAAGAGGCTAACTTTTAATCAATTGAAGTTTAGAAAC  640

seq1  CAAGTGACAATAAGCTCTGTGGAAACAATCAGAACATTTTAAAATAAAAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGACAATAAGCTCTGTGGAAACAATCAGAACATTTTAAAATAAAAG  690

seq1  TATACTTTTCAGTTTTATTGTGTAAATATCATTTTGAAAGCATTACTAAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTTTCAGTTTTATTGTGTAAATATCATTTTGAAAGCATTACTAAT  740

seq1  TTCAAAGCATTACTAATTTTAATTTCATGCTTAAGATTCCAAAACATATT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGCATTACTAATTTTAATTTCATGCTTAAGATTCCAAAACATATT  790

seq1  AGGGTTAAATAATTAAAATATGACAAATGTAATTGAAATTTAATAAAGTA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTAAATAATTAAAATATGACAAATGTAATTGAAATTTAATAAAGTA  840

seq1  ATTAAATGCAACTATAAAGAAATTAGAAGTCCCCTTAAATATACTTGTTG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATGCAACTATAAAGAAATTAGAAGTCCCCTTAAATATACTTGTTG  890

seq1  AGATGCCTCATTATTTTGTTAGTGTCTAGATATCAACAAGATTTTCTCAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCTCATTATTTTGTTAGTGTCTAGATATCAACAAGATTTTCTCAA  940

seq1  AAATCAGTTTATTTTCACATGACTCATTATACCTAATGAAGGTAATATTG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGTTTATTTTCACATGACTCATTATACCTAATGAAGGTAATATTG  990

seq1  GAAATGTTATTATCTTGTCCTATGATAAAACTGCAGGAGATATATGCTAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTTATTATCTTGTCCTATGATAAAACTGCAGGAGATATATGCTAT  1040

seq1  TAAAATGAATTAATAAAACAAACTTTAAACATTGAATTAGTTTCAAATGG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGAATTAATAAAACAAACTTTAAACATTGAATTAGTTTCAAATGG  1090

seq1  CAAGATCCCTTTATATCACATTTTGTGTAATATAACATATTATATGTTAT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCCCTTTATATCACATTTTGTGTAATATAACATATTATATGTTAT  1140

seq1  ATTTTATTTGTGTGTTATTATCATGGTCAGAGAATTC  1179
      |||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTGTGTGTTATTATCATGGTCAGAGAATTC  1177


seq1: chr16_79178215_79179264
seq2: B6Ng01-284F14.g_67_1107

seq1  GAATTCTATTTTATTAATAGTTTAATTCTATCCACATTCATTAGATTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTTATTAATAGTTTAATTCTATCCACATTCATTAGATTCAA  50

seq1  AATACAAGTGAAAAGGGTGTTATTTTCCACAGTGATTTTTATCTTGGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAGTGAAAAGGGTGTTATTTTCCACAGTGATTTTTATCTTGGTAC  100

seq1  AGTCTCTCCTCTAGTTCGGTCTGCTCCAAATCAGCAGATTTAACTAACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTCCTCTAGTTCGGTCTGCTCCAAATCAGCAGATTTAACTAACTA  150

seq1  TGCGAAAAAAAAAGAAAAAAAAGGTTGAAAATAATCTGTAGGGCATAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAAAAAAAAAGAAAAAAAAGGTTGAAAATAATCTGTAGGGCATAGGT  200

seq1  ACACGAGTTACTTAGAAATATATATCAACCAATTAGACATTGGATTCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGAGTTACTTAGAAATATATATCAACCAATTAGACATTGGATTCAAC  250

seq1  ATAGTAAGTAACTCAGATACGATGAATGCTAATGGCGAGAAATGCATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAAGTAACTCAGATACGATGAATGCTAATGGCGAGAAATGCATAGA  300

seq1  TAATGTTCAAGTTCTAATGTAGAACAGTTTATGTGACAGACATTTGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTCAAGTTCTAATGTAGAACAGTTTATGTGACAGACATTTGCAGA  350

seq1  TTTTGGTATATATTCAGATGGTTCTGAAAACCCTAGACACACCATAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTATATATTCAGATGGTTCTGAAAACCCTAGACACACCATAAAAC  400

seq1  ATGAAGGAGAGAAAATACGTAATAGAGTTTATGGTGTGTCTGATGATACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGAGAGAAAATACGTAATAGAGTTTATGGTGTGTCTGATGATACG  450

seq1  TAGATTTGAATAAGAAGTAAAAAGTAGCTTTTAAGACTTAACATTCTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTGAATAAGAAGTAAAAAGTAGCTTTTAAGACTTAACATTCTTAT  500

seq1  AAAGAAATCCCAAGGGTAAGTCTTACGCAAAGATGTTCATTAAAAACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATCCCAAGGGTAAGTCTTACGCAAAGATGTTCATTAAAAACAAA  550

seq1  CAAACAAACAACCTGTCTGCCTCTTCCCTCAATTGGGGGGGGGCATAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAACCTGTCTGCCTCTTCCCTCAATTGGGGGGGGGCATAACT  600

seq1  ATCTACTGGAGGTGGTCTCTACAGGTTCTATCTCCCCTTTGTTGGGTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTGGAGGTGGTCTCTACAGGTTCTATCTCCCCTTTGTTGGGTATT  650

seq1  TTGTCTTAATCATCCCCTTTGGGTCTTGGGAGCCTCTCTCCTCCCTGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTAATCATCCCCTTTGGGTCTTGGGAGCCTCTCTCCTCCCTGGAG  700

seq1  TCTGGGACTTTCTAGTGGCTACCCCTAGTTTCCCACCCACTACTGCTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGACTTTCTAGTGGCTACCCCTAGTTTCCCACCCACTACTGCTACA  750

seq1  TATTTCTACTCAAGTTCCTGACCCTCTGGACTTCTTTCCTGTCCCTTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTACTCAAGTTCCTGACCCTCTGGACTTCTTTCCTGTCCCTTCCC  800

seq1  ATTCCTGATCCTTCCCCCTCCCTTCCGATCCCTCTCTCCCTCCTAGATCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGATCCTTCCCCCTCCCTTCCGATCCCTCTCTCCCTCCTAGATCC  850

seq1  CTTCCTCCCTCTACCTCCTGTGATTATTTTGCTCTCCCTTCTATGAAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCCCTCTACCTCCTGTGATTATTTTGCTCTCCCTTCTATGAAGGA  900

seq1  TTGAAGTATCCACACTTTGGTCTTATTTCCTTC-TTAAGCTTCATATGGT  949
      ||||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  TTGAAGTATCCACACTTTGGTCTTATTTCCTTCTTTAAGCTTCATATGGG  950

seq1  TTGTGGGTTGTATTCTGGCTCTCAAAAAATTTAACCCAGAATTGTTCCTG  999
      |||| || ||||||||||||||| ||||||| ||||||||  |||  |||
seq2  TTGT-GGATGTATTCTGGCTCTC-AAAAATTAAACCCAGA--TGT--CTG  994

seq1  TCCAAAGGAAAGAGAGGGACAAAACCTGGAGCAGAGACTGAATGAAAAGC  1049
      | |||| |||||||||||||||| |   |||||||||||| |||||||||
seq2  TTCAAA-GAAAGAGAGGGACAAATC--TGAGCAGAGACTG-ATGAAAAGC  1040

seq1  C  1050
      |
seq2  C  1041


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