BAC Information

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BAC

Clone NameB6Ng01-284I14
Chromosome16 (Build37)
Map Location 93,438,737 - 93,607,330
singlet/doubletdoublet
Overlap geneSetd4, LOC670912
Upstream geneDscr1, 2410124H12Rik, Clic6, Runx1, EG666023, LOC100040747
Downstream geneCbr1, EG435489, Cbr3, Dopey2, Morc3, Chaf1b, Cldn14, Sim2, Hlcs, LOC622832, LOC100040857, Dscr6, LOC545178, Pigp, Ttc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284I14.bB6Ng01-284I14.g
ACCGA083212GA083213
length9971,014
definitionB6Ng01-284I14.b B6Ng01-284I14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,606,339 - 93,607,330)(93,438,737 - 93,439,730)
sequence
gaattcacctcttaggacaccaaagcaaagctattggggtaatctttggg
caggaaacattccttactagcctgtggtatccctttagatacttctaatt
gctttgtcttacctggatgtttgtattgagtgtacagatgtgtacagggc
cttcaggggatgctgctcttctgtgcaccacaatgcacccttttagtccc
tttttaagatgacatgatgccatatgctcgcaaaatgacatttggttcag
tcgtgggaaacagatttcgtcactggttcctaacaccctggctataggga
tctccaggtcaagtttcgtttcctctccattcagtaggttgctattagaa
acaagtggccatttagattaaaataagacattttagttatactgacccca
caggaagacctctctgtgtgtatgaaggtcattgtattaggaatacagta
aaataaaggagacaggtataagatttccatttcaaaatattctactgcct
catatacattgcttgtaaattgccgttcaaagtaagctcctagtcaattg
cttaagaaacctgaataatccaaaaaaaaaaatgctgcccagggtgggat
ggctcagcaagtgagggcaaggaccttggtcacccagcagcctgagttca
atccttggaacccatgtaaccacaggaagcaagaacggtgtatgcgtgtt
ctgattgaacccatgtctgcgtaccatgtgccatgcccagagggcagaag
agggcaccgggcatcagatcccacagactggagtcacacgaggttgtgag
ctgccgaaagtatagtaaaacaccacgtatccacagcaagacaagcttcc
agttctgttcagactcctcttttgtgacctcaggtaaatttattcatttc
tgtatgatttccttggcattttaggttttgtgtccatcacagtcaaggca
taaaaaggattcttgttggttctttgcttgagcaaacacccctccag
gaattccttcacaacaggtagtgaaggagagagtttacactccatggccc
agccttaagcggtgaggggagcccaaactgagtcctgcactcaggactcc
tccatccaagtgggaagggccacatcagctttcctgccagagaaagaagg
cgcaggggagcaggggaggatgtctagcagctcaactcacacaggttggc
tgtccctgcagtcaactgaaaaacaaggagaaacgtgtcctctgacctcc
atgcatgccatagcatgtctgcatgtgtccatatgatgtgcctatacccc
atagacacatcacacacatacacacacacacacacacacaccaccaccac
caccaccaccaccaaaaaaaaaaaaaaaaccaaaaaacaaaaacaacaac
aacaacaaaaaaaaaaccttaagattggcctattccattgactcttcaaa
ttcttatagccattaggtaggggaataaaagatacctcaaaactaataag
ctttgttatacaaaaggacagattgtaaacactgaatgctattagaggca
gtctgtattagtaacatgagaaggcaaggcaagaggactggaggttagct
cagtgccaggcacttgcccaaggagccgaagagcatgaatttagtcccca
ggtctaggaggaaaaactgcagatcatgtaaaacatctaaaaaagtgcag
atttgctctaagacgcattcatcaacaggtttctgaaccaaaagctccat
tttctatttttaaatgctatcagtgagaattggggagcaaagttatatct
ttatactttcttgatatagaaggtctgctaaaatgatctcatttcctaat
ttttgactatataccaaatacagattttcatgatttttataaatggaaat
ggagttcctgaggagttaaactaagaatatttgaactttagcccatgtaa
agaaatccggtagagccacttaaaaattaattacgaaacatttagaaaag
aagccaaaatcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_93606339_93607330
seq2: B6Ng01-284I14.b_46_1042 (reverse)

seq1  CTGGAGGGGTGTTTGCTCAAGCAA--GACCAACAAG-ATCC-TTTTATGC  46
      ||||||||||||||||||||||||   ||||||||| |||| ||||||||
seq2  CTGGAGGGGTGTTTGCTCAAGCAAAGAACCAACAAGAATCCTTTTTATGC  50

seq1  CTTGACTGTGATGGACACAAAACCTAAAATGCCAAGGAAATCATACAG-A  95
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTTGACTGTGATGGACACAAAACCTAAAATGCCAAGGAAATCATACAGAA  100

seq1  ATGAATAAATTTACCTGAGGTCACAAAAGAGGAGTCTGAACAGAACTGGA  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAAATTTACCTGAGGTCACAAAAGAGGAGTCTGAACAGAACTGGA  150

seq1  AGCTTGTCTTGCTGTGGATACGTGGTGTTTTACTATACTTTCGGCAGCTC  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTCTTGCTGTGGATACGTGGTGTTTTACTATACTTTCGGCAGCTC  200

seq1  ACAACCTCGTGTGACTCCAGTCTGTGGGATCTGATGCCCGGTGCCCTCTT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCTCGTGTGACTCCAGTCTGTGGGATCTGATGCCCGGTGCCCTCTT  250

seq1  CTGCCCTCTGGGCATGGCACATGGTACGCAGACATGGGTTCAATCAGAAC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTCTGGGCATGGCACATGGTACGCAGACATGGGTTCAATCAGAAC  300

seq1  ACGCATACACCGTTCTTGCTTCCTGTGGTTACATGGGTTCCAAGGATTGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCATACACCGTTCTTGCTTCCTGTGGTTACATGGGTTCCAAGGATTGA  350

seq1  ACTCAGGCTGCTGGGTGACCAAGGTCCTTGCCCTCACTTGCTGAGCCATC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGCTGCTGGGTGACCAAGGTCCTTGCCCTCACTTGCTGAGCCATC  400

seq1  CCACCCTGGGCAGCATTTTTTTTTTTGGATTATTCAGGTTTCTTAAGCAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTGGGCAGCATTTTTTTTTTTGGATTATTCAGGTTTCTTAAGCAA  450

seq1  TTGACTAGGAGCTTACTTTGAACGGCAATTTACAAGCAATGTATATGAGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTAGGAGCTTACTTTGAACGGCAATTTACAAGCAATGTATATGAGG  500

seq1  CAGTAGAATATTTTGAAATGGAAATCTTATACCTGTCTCCTTTATTTTAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGAATATTTTGAAATGGAAATCTTATACCTGTCTCCTTTATTTTAC  550

seq1  TGTATTCCTAATACAATGACCTTCATACACACAGAGAGGTCTTCCTGTGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCCTAATACAATGACCTTCATACACACAGAGAGGTCTTCCTGTGG  600

seq1  GGTCAGTATAACTAAAATGTCTTATTTTAATCTAAATGGCCACTTGTTTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGTATAACTAAAATGTCTTATTTTAATCTAAATGGCCACTTGTTTC  650

seq1  TAATAGCAACCTACTGAATGGAGAGGAAACGAAACTTGACCTGGAGATCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCAACCTACTGAATGGAGAGGAAACGAAACTTGACCTGGAGATCC  700

seq1  CTATAGCCAGGGTGTTAGGAACCAGTGACGAAATCTGTTTCCCACGACTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGCCAGGGTGTTAGGAACCAGTGACGAAATCTGTTTCCCACGACTG  750

seq1  AACCAAATGTCATTTTGCGAGCATATGGCATCATGTCATCTTAAAAAGGG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATGTCATTTTGCGAGCATATGGCATCATGTCATCTTAAAAAGGG  800

seq1  ACTAAAAGGGTGCATTGTGGTGCACAGAAGAGCAGCATCCCCTGAAGGCC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAGGGTGCATTGTGGTGCACAGAAGAGCAGCATCCCCTGAAGGCC  850

seq1  CTGTACACATCTGTACACTCAATACAAACATCCAGGTAAGACAAAGCAAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACACATCTGTACACTCAATACAAACATCCAGGTAAGACAAAGCAAT  900

seq1  TAGAAGTATCTAAAGGGATACCACAGGCTAGTAAGGAATGTTTCCTGCCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTATCTAAAGGGATACCACAGGCTAGTAAGGAATGTTTCCTGCCC  950

seq1  AAAGATTACCCCAATAGCTTTGCTTTGGTGTCCTAAGAGGTGAATTC  992
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTACCCCAATAGCTTTGCTTTGGTGTCCTAAGAGGTGAATTC  997

seq1: chr16_93438737_93439730
seq2: B6Ng01-284I14.g_67_1080

seq1  GAATTCCTTCACAACAGGTAGTGAAGGAGAGAGTTTACACTCCATGGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCACAACAGGTAGTGAAGGAGAGAGTTTACACTCCATGGCCC  50

seq1  AGCCTTAAGCGGTGAGGGGAGCCCAAACTGAGTCCTGCACTCAGGACTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTAAGCGGTGAGGGGAGCCCAAACTGAGTCCTGCACTCAGGACTCC  100

seq1  TCCATCCAAGTGGGAAGGGCCACATCAGCTTTCCTGCCAGAGAAAGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCAAGTGGGAAGGGCCACATCAGCTTTCCTGCCAGAGAAAGAAGG  150

seq1  CGCAGGGGAGCAGGGGAGGATGTCTAGCAGCTCAACTCACACAGGTTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGGGAGCAGGGGAGGATGTCTAGCAGCTCAACTCACACAGGTTGGC  200

seq1  TGTCCCTGCAGTCAACTGAAAAACAAGGAGAAACGTGTCCTCTGACCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTGCAGTCAACTGAAAAACAAGGAGAAACGTGTCCTCTGACCTCC  250

seq1  ATGCATGCCATAGCATGTCTGCATGTGTCCATATGATGTGCCTATACCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGCCATAGCATGTCTGCATGTGTCCATATGATGTGCCTATACCCC  300

seq1  ATAGACACATCACACACATACACACACACACACACACACACCACCACCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACACATCACACACATACACACACACACACACACACACCACCACCAC  350

seq1  CACCACCACCACCAAAAAAAAAAAAAAAACCAAAAAACAAAAACAACAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCACCACCAAAAAAAAAAAAAAAACCAAAAAACAAAAACAACAAC  400

seq1  AACAACAAAAAAAAAACCTTAAGATTGGCCTATTCCATTGACTCTTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAAAAAAAAAACCTTAAGATTGGCCTATTCCATTGACTCTTCAAA  450

seq1  TTCTTATAGCCATTAGGTAGGGGAATAAAAGATACCTCAAAACTAATAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATAGCCATTAGGTAGGGGAATAAAAGATACCTCAAAACTAATAAG  500

seq1  CTTTGTTATACAAAAGGACAGATTGTAAACACTGAATGCTATTAGAGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTATACAAAAGGACAGATTGTAAACACTGAATGCTATTAGAGGCA  550

seq1  GTCTGTATTAGTAACATGAGAAGGCAAGGCAAGAGGACTGGAGGTTAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTATTAGTAACATGAGAAGGCAAGGCAAGAGGACTGGAGGTTAGCT  600

seq1  CAGTGCCAGGCACTTGCCCAAGGAGCCGAAGAGCATGAATTTAGTCCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCAGGCACTTGCCCAAGGAGCCGAAGAGCATGAATTTAGTCCCCA  650

seq1  GGTCTAGGAGGAAAAACTGCAGATCATGTAAAACATCT-AAAAAGTGCAG  699
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGTCTAGGAGGAAAAACTGCAGATCATGTAAAACATCTAAAAAAGTGCAG  700

seq1  A-TTGCTCTAAGACGCATTCATCAACAGGTTTCTGAACCAAAAGCTCCAT  748
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTCTAAGACGCATTCATCAACAGGTTTCTGAACCAAAAGCTCCAT  750

seq1  TTTCTATTTTTAAATGCTATCAGTGAGAATTGGGGAGCAAAGTTATATC-  797
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTCTATTTTTAAATGCTATCAGTGAGAATTGGGGAGCAAAGTTATATCT  800

seq1  TTATACTTTCTTGATATAGAAGGCTTGCTAAAATGATCTCATT--CTTAA  845
      |||||||||||||||||||||||  ||||||||||||||||||  || | 
seq2  TTATACTTTCTTGATATAGAAGGTCTGCTAAAATGATCTCATTTCCTAAT  850

seq1  TTTTGACTATATA-CAAATACAGATTTT-ATGATTTTTATAAATGTAA--  891
      ||||||||||||| |||||||||||||| |||||||||||||||| ||  
seq2  TTTTGACTATATACCAAATACAGATTTTCATGATTTTTATAAATGGAAAT  900

seq1  TGAGTTCCTGAGGAGTTAAACT-AGAATATTTGAAC-TTAG-CCATGTAA  938
       ||||||||||||||||||||| ||||||||||||| |||| ||||||||
seq2  GGAGTTCCTGAGGAGTTAAACTAAGAATATTTGAACTTTAGCCCATGTAA  950

seq1  --GAATACGGTAGAG-CACATAAAAA-TAATAAC-AAACA-TTAG-AAAG  981
         ||| |||||||| ||| |||||| |||| || ||||| |||| ||||
seq2  AGAAATCCGGTAGAGCCACTTAAAAATTAATTACGAAACATTTAGAAAAG  1000

seq1  AAG-CAAAACCCTT  994
      ||| ||||| ||||
seq2  AAGCCAAAATCCTT  1014