BAC Information

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BAC

Clone NameB6Ng01-284P02
Chromosome16 (Build37)
Map Location 52,937,590 - 53,076,561
singlet/doubletdoublet
Overlap geneLOC667895
Upstream geneCblb, Alcam, LOC100043430
Downstream geneLOC433027
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284P02.bB6Ng01-284P02.g
ACCGA083519GA083520
length1,0821,119
definitionB6Ng01-284P02.b B6Ng01-284P02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(53,075,491 - 53,076,561)(52,937,590 - 52,938,711)
sequence
gaattcattttttttttcaatagctgagtagtactccattgtgtaaatgt
accatatgttatgtatccattcttctgttgagggacatctgggttctttt
cagttactgggtattataaataaggctgctatgaacatagtggaacatgt
gtccttattacatgttggagccgcttctggatatatgcccagggctgtta
tagttcggtcctcaggcagtaatatattcagttttctgagagatgaccaa
actgatttccagagtgttcgtacctgcttgcaatcctaacagcaatggag
aagtgtttctctttctgtacatcctagccagcatctgctgtcacctgaga
ttttgatctcagccattctggctggtgtgaggtggaatctcagggttgtt
ttgatttgcatttccctgatgactaatggtgttgaacatttcttttggtg
cttctcagtcattcagtattcctcagttgaggattctttgtttagcgctg
taccccatttttttaatcttcatatcttgtgtcaccccaagtggttatat
ggggttcagtactgtactttatttagaaagcacagagctacaaatgttac
caaatactctgcaaagttttggcatctcaaaactatttcctctgtgccca
gaatttatcttgatatttttatattttcatattcatgaaatttaatttca
gcatagttactttccattaaactgtgaaacatggactgtacaatgtaatg
gctttatatatgctacttagagaactatgccagaggttttaggaattaat
aaatatttattaaatgcaaactacccatgtttatgtggaaaaaatcttag
tataactgacaaatttcaatctaaaaactctattttctcaattattgata
gacatttcttagcatatctgtattacaaatgtccatcaattgccatttca
atcattcagcattcctaaaaggtttttcattttattacacacatgtgcac
acactctcacacacacatacacccctccccccacacacacctgagagaga
gtagtgtagtttgttttgggttttcttcatta

gaattcagtgagattggaagggactgcacttttacatggtcttagcagcc
aagaactatttatcatttctggtcatttttaaaatagaatttaacttttt
ttctgagtgaatgaaaagattgattcttcttctctctttctgaggtaaga
aaaagctagatattttttatgagagaaccaaataattcaaattaatttta
atgaagtgtcagacactatgggtgacataaaatacatgctcaggaaagaa
aaaatagttattctttgtgtcatcaatttactcatttggatatgtaaact
accatatcaaataatccatggagaaacatgcaaaaatccaggagcactct
attgtcttaaaacagctaacagatatcacatcttattattttatcatcat
catcatcatcattattattataagaatgtacatttatttatagtttactg
ccattctttgtaatgctgcacatccattttctataaaatcttgattcata
atttgaagagtaatttcatccaataaaaaacaccttccctgtgcatatct
ctgtgcatactgttaggcataggattgacttgacttctctcagaatacat
tttataatttgcactctcaaagaggagatactgaatttatacaaagtacg
cctatttaaagctgtctttctgtttggatttgagtcctctggtgttctgt
gaatgagatctacgtagtctgtcggtaggtgcgcaactgtctaattacca
actcagctctactccgtgatggatgcagtaacaatcattttataactcaa
acattttaaaatgctcttcaagtatactatatatgcataaatgtacctat
tatacatacatatttatttatatgtttgagcatttataaatacgtaaata
ctaatagatgatgtgtaaagagactaggagtttactgaatttatcttgga
ggtggtcaaatgcagtatattatgtttcaagtattattacattatggtac
tgtatgctttctatcatttctatccataccggaaatgaggatgaaatgac
ctggattagataaaataagtcacagaatgaaaggttaaggggtatgctct
taatattttgttacaatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_53075491_53076561
seq2: B6Ng01-284P02.b_60_1126 (reverse)

seq1  TAATGAAGAAAACACAAAACAAACTACACTACTTCTTCTCTCAGGTGTGT  50
      ||||||||||||| |||||||||||||||||||   ||||||||||||||
seq2  TAATGAAGAAAACCCAAAACAAACTACACTACT--CTCTCTCAGGTGTGT  48

seq1  GTTGGGGGGAGGGGTGTATGTGTGTGTGAGAGTGTGTGCACATGTGTGTT  100
      | |||||||||||||||||||||||||||||||||||||||||||||| |
seq2  G-TGGGGGGAGGGGTGTATGTGTGTGTGAGAGTGTGTGCACATGTGTG-T  96

seq1  AATAAAATGAAAAACCTTTTAGGAATGCTGAATGATTGAAATGGCAATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATGAAAAACCTTTTAGGAATGCTGAATGATTGAAATGGCAATTG  146

seq1  ATGGACATTTGTAATACAGATATGCTAAGAAATGTCTATCAATAATTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACATTTGTAATACAGATATGCTAAGAAATGTCTATCAATAATTGAG  196

seq1  AAAATAGAGTTTTTAGATTGAAATTTGTCAGTTATACTAAGATTTTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGAGTTTTTAGATTGAAATTTGTCAGTTATACTAAGATTTTTTCC  246

seq1  ACATAAACATGGGTAGTTTGCATTTAATAAATATTTATTAATTCCTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAACATGGGTAGTTTGCATTTAATAAATATTTATTAATTCCTAAAA  296

seq1  CCTCTGGCATAGTTCTCTAAGTAGCATATATAAAGCCATTACATTGTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGCATAGTTCTCTAAGTAGCATATATAAAGCCATTACATTGTACA  346

seq1  GTCCATGTTTCACAGTTTAATGGAAAGTAACTATGCTGAAATTAAATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATGTTTCACAGTTTAATGGAAAGTAACTATGCTGAAATTAAATTTC  396

seq1  ATGAATATGAAAATATAAAAATATCAAGATAAATTCTGGGCACAGAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATGAAAATATAAAAATATCAAGATAAATTCTGGGCACAGAGGAA  446

seq1  ATAGTTTTGAGATGCCAAAACTTTGCAGAGTATTTGGTAACATTTGTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTGAGATGCCAAAACTTTGCAGAGTATTTGGTAACATTTGTAGC  496

seq1  TCTGTGCTTTCTAAATAAAGTACAGTACTGAACCCCATATAACCACTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCTTTCTAAATAAAGTACAGTACTGAACCCCATATAACCACTTGG  546

seq1  GGTGACACAAGATATGAAGATTAAAAAAATGGGGTACAGCGCTAAACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACACAAGATATGAAGATTAAAAAAATGGGGTACAGCGCTAAACAAA  596

seq1  GAATCCTCAACTGAGGAATACTGAATGACTGAGAAGCACCAAAAGAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTCAACTGAGGAATACTGAATGACTGAGAAGCACCAAAAGAAATG  646

seq1  TTCAACACCATTAGTCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACACCATTAGTCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  696

seq1  TCCACCTCACACCAGCCAGAATGGCTGAGATCAAAATCTCAGGTGACAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACACCAGCCAGAATGGCTGAGATCAAAATCTCAGGTGACAGC  746

seq1  AGATGCTGGCTAGGATGTACAGAAAGAGAAACACTTCTCCATTGCTGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGGCTAGGATGTACAGAAAGAGAAACACTTCTCCATTGCTGTTA  796

seq1  GGATTGCAAGCAGGTACGAACACTCTGGAAATCAGTTTGGTCATCTCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCAAGCAGGTACGAACACTCTGGAAATCAGTTTGGTCATCTCTCA  846

seq1  GAAAACTGAATATATTACTGCCTGAGGACCGAACTATAACAGCCCTGGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTGAATATATTACTGCCTGAGGACCGAACTATAACAGCCCTGGGC  896

seq1  ATATATCCAGAAGCGGCTCCAACATGTAATAAGGACACATGTTCCACTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCCAGAAGCGGCTCCAACATGTAATAAGGACACATGTTCCACTAT  946

seq1  GTTCATAGCAGCCTTATTTATAATACCCAGTAACTGAAAAGAACCCAGAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATAGCAGCCTTATTTATAATACCCAGTAACTGAAAAGAACCCAGAT  996

seq1  GTCCCTCAACAGAAGAATGGATACATAACATATGGTACATTTACACAATG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTCAACAGAAGAATGGATACATAACATATGGTACATTTACACAATG  1046

seq1  GAGTACTACTCAGCTATTGAA  1071
      |||||||||||||||||||||
seq2  GAGTACTACTCAGCTATTGAA  1067


seq1: chr16_52937590_52938711
seq2: B6Ng01-284P02.g_65_1183

seq1  GAATTCAGTGAGATTGGAAGGGACTGCACTTTTACATGGTCTTAGCAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGAGATTGGAAGGGACTGCACTTTTACATGGTCTTAGCAGCC  50

seq1  AAGAACTATTTATCATTTCTGGTCATTTTTAAAATAGAATTTAACTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTATTTATCATTTCTGGTCATTTTTAAAATAGAATTTAACTTTTT  100

seq1  TTCTGAGTGAATGAAAAGATTGATTCTTCTTCTCTCTTTCTGAGGTAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGTGAATGAAAAGATTGATTCTTCTTCTCTCTTTCTGAGGTAAGA  150

seq1  AAAAGCTAGATATTTTTTATGAGAGAACCAAATAATTCAAATTAATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTAGATATTTTTTATGAGAGAACCAAATAATTCAAATTAATTTTA  200

seq1  ATGAAGTGTCAGACACTATGGGTGACATAAAATACATGCTCAGGAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTGTCAGACACTATGGGTGACATAAAATACATGCTCAGGAAAGAA  250

seq1  AAAATAGTTATTCTTTGTGTCATCAATTTACTCATTTGGATATGTAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGTTATTCTTTGTGTCATCAATTTACTCATTTGGATATGTAAACT  300

seq1  ACCATATCAAATAATCCATGGAGAAACATGCAAAAATCCAGGAGCACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATCAAATAATCCATGGAGAAACATGCAAAAATCCAGGAGCACTCT  350

seq1  ATTGTCTTAAAACAGCTAACAGATATCACATCTTATTATTTTATCATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTTAAAACAGCTAACAGATATCACATCTTATTATTTTATCATCAT  400

seq1  CATCATCATCATTATTATTATAAGAATGTACATTTATTTATAGTTTACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCATCATTATTATTATAAGAATGTACATTTATTTATAGTTTACTG  450

seq1  CCATTCTTTGTAATGCTGCACATCCATTTTCTATAAAATCTTGATTCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTTTGTAATGCTGCACATCCATTTTCTATAAAATCTTGATTCATA  500

seq1  ATTTGAAGAGTAATTTCATCCAATAAAAAACACCTTCCCTGTGCATATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAGAGTAATTTCATCCAATAAAAAACACCTTCCCTGTGCATATCT  550

seq1  CTGTGCATACTGTTAGGCATAGGATTGACTTGACTTCTCTCAGAATACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCATACTGTTAGGCATAGGATTGACTTGACTTCTCTCAGAATACAT  600

seq1  TTTATAATTTGCACTCTCAAAGAGGAGATACTGAATTTATACAAAGTACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATTTGCACTCTCAAAGAGGAGATACTGAATTTATACAAAGTACG  650

seq1  CCTATTTAAAGCTGTCTTTCTGTTTGGATTTGAGTCCTCTGGTGTTCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTAAAGCTGTCTTTCTGTTTGGATTTGAGTCCTCTGGTGTTCTGT  700

seq1  GAATGAGATCTACGTAGTCTGTCGGTAGGTGCGCAACTGTCTAATTACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGATCTACGTAGTCTGTCGGTAGGTGCGCAACTGTCTAATTACCA  750

seq1  ACTCAGCTCTACTCCGTGATGGATGCAGTAACAATCATTTTATAACTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCTCTACTCCGTGATGGATGCAGTAACAATCATTTTATAACTCAA  800

seq1  ACATTTTAAAATGCTCTTCAAGTATACTATATATGCATAAATGTACCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTAAAATGCTCTTCAAGTATACTATATATGCATAAATGTACCTAT  850

seq1  TATACATACATATTTATTTATATGTTTGAGCATTTATAAATACGTAAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATACATATTTATTTATATGTTTGAGCATTTATAAATACGTAAATA  900

seq1  CTAATAGATGATGTGTAAAGAGACTAGGAGTTTACTGAATTAATCTTGAA  950
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  CTAATAGATGATGTGTAAAGAGACTAGGAGTTTACTGAATTTATCTTGGA  950

seq1  G--TGTCAAATGCAGTATATTATGTTTCAAGTATTATTACATTATTGTAC  998
      |   ||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGTGGTCAAATGCAGTATATTATGTTTCAAGTATTATTACATTATGGTAC  1000

seq1  TTGTATGCTTTCTATCATTTCTATCCATACC-GAAATGAAGAATGAAAAT  1047
       |||||||||||||||||||||||||||||| |||||| || ||| ||||
seq2  -TGTATGCTTTCTATCATTTCTATCCATACCGGAAATG-AGGATG-AAAT  1047

seq1  GAACTGAATTAGATAAAATAAGTCCACAGAAATGAAA-GTTACAGGGTAT  1096
      || ||| |||||||||||||||| ||||| ||||||| ||||  ||||||
seq2  GACCTGGATTAGATAAAATAAGT-CACAG-AATGAAAGGTTAAGGGGTAT  1095

seq1  GCTCCTTAAATATTTGTTTACAATAC  1122
      ||||  | |||||||  |||||||||
seq2  GCTC--TTAATATTTTGTTACAATAC  1119


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