BAC Information

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BAC

Clone NameB6Ng01-285G22
Chromosome16 (Build37)
Map Location 4,179,214 - 4,295,247
singlet/doubletdoublet
Overlap geneCrebbp, EG436332, Adcy9
Upstream geneLOC100042251, LOC100042925, LOC100042270, LOC100042937, LOC100042283, Olfr161, Olfr162-ps1, Olfr163-ps1, LOC100042949, Mefv, EG620395, Zfp263, Olfr15, Zfp174, Zfp597, 1200013P24Rik, 1700037C18Rik, Cluap1, LOC664851, Nlrc3, Btbd12, Dnase1, Trap1
Downstream geneEG620313, Srl, Tcfap4, Glis2, Magmas, Coro7, Vasn, Dnaja3, Nmral1, Hmox2, 5730403B10Rik, 4930562C15Rik, 1500031H01Rik, Mgrn1, Nudt16l1, Anks3, 4930451G09Rik, Sept12, EG432995, Rogdi, 3930401K13Rik, Ubn1, Ppl, Sec14l5, Nagpa, AU021092, Alg1, 5730409G15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285G22.bB6Ng01-285G22.g
ACCGA083884GA083885
length1,139686
definitionB6Ng01-285G22.b B6Ng01-285G22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,179,214 - 4,180,374)(4,294,561 - 4,295,247)
sequence
gaattcttattttaaagataaaaagaggtagagatttatctgatcaggac
ttcaaaaaaaacaaaacaaaacaacctgtttctttcatggacatgtgaaa
ctttcaagagaagggaaaataagaagccacatagacccatgctgccctgt
gtcttgaaagtaaatgcccatcatcattcaagaaacattcaagcacttca
gctcacttaccttggtcatgcctcctgcctgtgctgtatttagtccagca
tggccagccatttgtggggaaacctgtgtcaaggtctccgccagcacact
gcttgtggccccctgcatggctggagcagggtagggcattccagctcccc
ttcctcttccagcagccccaagagatccattcatgacttgagcttgccct
tgttgagcctgattcattaagctatggccagagttactattgagaaggcc
tgggtgggtctggttgaagttagcattcatgcagatcccaggtccagtct
gtgatgtggcaggactactggtcaccagccctacttgcttttgtgcttgt
ggattcagtgcttgggaggcagggggagtgggcccagaggtgctggctgc
ctgtttgggcaggttgggtgttgatgagtctccttggttcagagggctct
tgcccatggcacctaagctggccatgtttgtactgttcggctgcccctga
gcctggccaccaaggccctgttgcacagggctgctggcactcacattgcc
tatccctgggttgatgctagagccgctgcctcctctaagaagctctgaca
gttgtttatgtttggacgcagcatctggaacaaggttcccactgtttaaa
agcttaattctccattggggatcagctcatcaggaaggtcattttccaag
tcaaacaatgatccaaaatctagaaattaagcagaaatggaatgagatct
agaaaacgtaacagctctccaactgtcatgtgttataatcttacctatga
aacatttcacacagactactagcatgtcttagagtagtatcaaccagtat
gaaaccacttatttaggagtaaacaagaaaaactttttttttcaatcagg
agaagtacatacataatgagaaaggaccaactcttgttt
gaattcattaacagcttttaccttcgggtgccttgtgagcccttcatggt
gacatggtcagagctttgggttcccctcttggatctagaggagtgaagta
ggggcctcccatctacctccctgctacaattcaaacagattttggcagga
actaatagatgaaccttaccaagaccccttctacatggagggttctcaga
ggtacagcccagtcccagttgtagctgggactagcagggcagtggttgcc
aggtagtaaacaaaagcctgaatctatttaataataataataataataat
aataataataataatagattcaccttttacaaaagagaaggtgttcacca
gccttgtgttgctgggataaaattccccaggcagcttatagaagaaagtg
ctgagttgggcttatggtttcagaggatcatgaccaaatatttacctcat
gtcacccaaaagggaagttacgtgaactcttcttgagttgcttttaataa
tgcctttttatttcctgtaatactttattcattttctttccagttccatt
gtgatgtcccccttggactcagcacagaatttcaggtgagtttccaacct
ggggccttatctcccgaaaatacgcatgtacatgcatgcatgcatgcatg
ctttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_4179214_4180374
seq2: B6Ng01-285G22.b_46_1184

seq1  GAATTCTTATTTTAAAGATAAAAAGAGGTAGAGATTTATCTGATCAGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTTTAAAGATAAAAAGAGGTAGAGATTTATCTGATCAGGAC  50

seq1  TTCAAAAAAAACAAAACAAAACAACCTGTTTCTTTCATGGACATGTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAAAAACAAAACAAAACAACCTGTTTCTTTCATGGACATGTGAAA  100

seq1  CTTTCAAGAGAAGGGAAAATAAGAAGCCACATAGACCCATGCTGCCCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAGAGAAGGGAAAATAAGAAGCCACATAGACCCATGCTGCCCTGT  150

seq1  GTCTTGAAAGTAAATGCCCATCATCATTCAAGAAACATTCAAGCACTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAAAGTAAATGCCCATCATCATTCAAGAAACATTCAAGCACTTCA  200

seq1  GCTCACTTACCTTGGTCATGCCTCCTGCCTGTGCTGTATTTAGTCCAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTTACCTTGGTCATGCCTCCTGCCTGTGCTGTATTTAGTCCAGCA  250

seq1  TGGCCAGCCATTTGTGGGGAAACCTGTGTCAAGGTCTCCGCCAGCACACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGCCATTTGTGGGGAAACCTGTGTCAAGGTCTCCGCCAGCACACT  300

seq1  GCTTGTGGCCCCCTGCATGGCTGGAGCAGGGTAGGGCATTCCAGCTCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGGCCCCCTGCATGGCTGGAGCAGGGTAGGGCATTCCAGCTCCCC  350

seq1  TTCCTCTTCCAGCAGCCCCAAGAGATCCATTCATGACTTGAGCTTGCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTTCCAGCAGCCCCAAGAGATCCATTCATGACTTGAGCTTGCCCT  400

seq1  TGTTGAGCCTGATTCATTAAGCTATGGCCAGAGTTACTATTGAGAAGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGCCTGATTCATTAAGCTATGGCCAGAGTTACTATTGAGAAGGCC  450

seq1  TGGGTGGGTCTGGTTGAAGTTAGCATTCATGCAGATCCCAGGTCCAGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGGTCTGGTTGAAGTTAGCATTCATGCAGATCCCAGGTCCAGTCT  500

seq1  GTGATGTGGCAGGACTACTGGTCACCAGCCCTACTTGCTTTTGTGCTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTGGCAGGACTACTGGTCACCAGCCCTACTTGCTTTTGTGCTTGT  550

seq1  GGATTCAGTGCTTGGGAGGCAGGGGGAGTGGGCCCAGAGGTGCTGGCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAGTGCTTGGGAGGCAGGGGGAGTGGGCCCAGAGGTGCTGGCTGC  600

seq1  CTGTTTGGGCAGGTTGGGTGTTGATGAGTCTCCTTGGTTCAGAGGGCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGGGCAGGTTGGGTGTTGATGAGTCTCCTTGGTTCAGAGGGCTCT  650

seq1  TGCCCATGGCACCTAAGCTGGCCATGTTTGTACTGTTCGGCTGCCCCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATGGCACCTAAGCTGGCCATGTTTGTACTGTTCGGCTGCCCCTGA  700

seq1  GCCTGGCCACCAAGGCCCTGTTGCACAGGGCTGCTGGCACTCACATTGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGCCACCAAGGCCCTGTTGCACAGGGCTGCTGGCACTCACATTGCC  750

seq1  TATCCCTGGGTTGATGCTAGAGCCGCTGCCTCCTCTAAGAAGCTCTGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCTGGGTTGATGCTAGAGCCGCTGCCTCCTCTAAGAAGCTCTGACA  800

seq1  GTTGTTTATGTTTGGACGCAGCATCTGGAACAAGGTTCCCACTGTTTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTATGTTTGGACGCAGCATCTGGAACAAGGTTCCCACTGTTTAAA  850

seq1  AGGCTTAATTCTCCATTGGGGATCAGCTCATCAGGAAGGTCATTTTCCAA  900
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-GCTTAATTCTCCATTGGGGATCAGCTCATCAGGAAGGTCATTTTCCAA  899

seq1  GTCAAACAATGATCCAAAATCTAGAAATTAAGCAGAAATGGAAATGAGAA  950
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  GTCAAACAATGATCCAAAATCTAGAAATTAAGCAGAAATGG-AATGAG-A  947

seq1  TCTAAGAAAACGTAACAGCTCTCCAACTGTCATGTTGTTATAATCTTAAC  1000
      ||| |||||||||||||||||||||||||||||| |||||||||||| ||
seq2  TCT-AGAAAACGTAACAGCTCTCCAACTGTCATG-TGTTATAATCTT-AC  994

seq1  CTAAGGAAACATTTCACACAGACTACTAGCATGTCTTAAGAGTAGTATTA  1050
      || | |||||||||||||||||||||||||||||||| ||||||||| | 
seq2  CT-ATGAAACATTTCACACAGACTACTAGCATGTCTT-AGAGTAGTA-TC  1041

seq1  AACCAGTAATGAAA-CAC-TATTTAGGGAGGTAAAACAAGAAAAAAATTT  1098
      ||||||| |||||| ||| |||||| ||||   ||||||| ||||| |||
seq2  AACCAGT-ATGAAACCACTTATTTA-GGAG--TAAACAAG-AAAAACTTT  1086

seq1  TTTTTTCAAATTCAGAAAGAGGAAACATTAAACAATAATGAGAAAAGGAC  1148
      |||||||||  |||| |  ||   ||||   || |||||||| |||||||
seq2  TTTTTTCAA--TCAGGAGAAG--TACAT---AC-ATAATGAG-AAAGGAC  1127

seq1  CAACTCTTTGTTT  1161
      |||||| ||||||
seq2  CAACTC-TTGTTT  1139

seq1: chr16_4294561_4295247
seq2: B6Ng01-285G22.g_71_756 (reverse)

seq1  ACACACACACACACACACACACACACACACACACAAGCATGCATGCATGC  50
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACA-AAGCATGCATGCATGC  49

seq1  ATGCATGTACATGCGTATTTTCGGGAGATAAGGCCCCAGGTTGGAAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGTACATGCGTATTTTCGGGAGATAAGGCCCCAGGTTGGAAACTC  99

seq1  ACCTGAAATTCTGTGCTGAGTCCAAGGGGGACATCACAATGGAACTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAAATTCTGTGCTGAGTCCAAGGGGGACATCACAATGGAACTGGAA  149

seq1  AGAAAATGAATAAAGTATTACAGGAAATAAAAAGGCATTATTAAAAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGAATAAAGTATTACAGGAAATAAAAAGGCATTATTAAAAGCAA  199

seq1  CTCAAGAAGAGTTCACGTAACTTCCCTTTTGGGTGACATGAGGTAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAAGAGTTCACGTAACTTCCCTTTTGGGTGACATGAGGTAAATAT  249

seq1  TTGGTCATGATCCTCTGAAACCATAAGCCCAACTCAGCACTTTCTTCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCATGATCCTCTGAAACCATAAGCCCAACTCAGCACTTTCTTCTAT  299

seq1  AAGCTGCCTGGGGAATTTTATCCCAGCAACACAAGGCTGGTGAACACCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCCTGGGGAATTTTATCCCAGCAACACAAGGCTGGTGAACACCTT  349

seq1  CTCTTTTGTAAAAGGTGAATCTATTATTATTATTATTATTATTATTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTGTAAAAGGTGAATCTATTATTATTATTATTATTATTATTATTA  399

seq1  TTATTATTAAATAGATTCAGGCTTTTGTTTACTACCTGGCAACCACTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTAAATAGATTCAGGCTTTTGTTTACTACCTGGCAACCACTGCC  449

seq1  CTGCTAGTCCCAGCTACAACTGGGACTGGGCTGTACCTCTGAGAACCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAGTCCCAGCTACAACTGGGACTGGGCTGTACCTCTGAGAACCCTC  499

seq1  CATGTAGAAGGGGTCTTGGTAAGGTTCATCTATTAGTTCCTGCCAAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAGAAGGGGTCTTGGTAAGGTTCATCTATTAGTTCCTGCCAAAATC  549

seq1  TGTTTGAATTGTAGCAGGGAGGTAGATGGGAGGCCCCTACTTCACTCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAATTGTAGCAGGGAGGTAGATGGGAGGCCCCTACTTCACTCCTC  599

seq1  TAGATCCAAGAGGGGAACCCAAAGCTCTGACCATGTCACCATGAAGGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCCAAGAGGGGAACCCAAAGCTCTGACCATGTCACCATGAAGGGCT  649

seq1  CACAAGGCACCCGAAGGTAAAAGCTGTTAATGAATTC  687
      |||||||||||||||||||||||||||||||||||||
seq2  CACAAGGCACCCGAAGGTAAAAGCTGTTAATGAATTC  686