BAC Information

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BAC

Clone NameB6Ng01-285J21
Chromosome16 (Build37)
Map Location 23,066,771 - 23,186,968
singlet/doubletdoublet
Overlap geneKng1, LOC666493, Eif4a2, Rfc4, Adipoq, LOC100043541, EG625835
Upstream geneIgf2bp2, EG545152, EG666421, Sfrs10, LOC100043507, Etv5, Dgkg, LOC671242, LOC666459, Crygs, Tbccd1, Dnajb11, Ahsg, Fetub, Hrg, Kng2, LOC624311, LOC666486, LOC666489
Downstream geneBC106179, St6gal1, Rtp1, Masp1, LOC100043018, Rtp4, EG625969, LOC100043023, Sst, Rtp2, Bcl6, EG433009
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285J21.bB6Ng01-285J21.g
ACCGA084022GA084023
length1,095361
definitionB6Ng01-285J21.b B6Ng01-285J21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,066,771 - 23,067,875)(23,186,608 - 23,186,968)
sequence
gaattcaaggtcaacctgggactaagcacattccagatccaggtgtggtg
gtgcacacttttaatctgagccataccttgtgctggtggcctacataaag
acactggaagaaggaagactcactcttcttcatgtgcttgcacttccttg
ccagcacatctgttagaacctaattcttcaggattccagcttatacagaa
gaccaggtaagatagctagctttgtggcctgagcaactactagacatttg
gacttcccattcacagctgcccattgttgggtcacttggactacaagttg
taagtcattataataaattcctttaatatatagagatattccataagatc
tttgactctagagaatcctgaataatacagtcacataatggaatgtttaa
agatttaattgaataacaatagtaaacaacaatgaataatctgaagtaaa
ctcattcctgatatatctgggaggagcatggaccctcattccaagaataa
ttctgtgctttcaagaaactgaggtcacaagactcctgccttgtactctt
ggagtgttctcacaagcactcaaaattctcctcacacaacttccttcctg
aaccctgttctaagaagctagtatgcctgaaggcctggcttcaatcccca
tcagttcatacagcagccatagaagcctctggagaaaagcagaggaagga
gatcagacacttgaagccaaccatagctgtgtagacacttccagaccaac
cttgaatatctgagaccctgtcaaaacatgaaatcaatagaagagcataa
aataaccgttctcaacaatctccatctttgcttttgactgcacaggggtc
ctaaattctcattatctttaactcatacatgaattacagaaagtcaggtt
ttcaggatctttctaaatggtctcagggtttaggaccatgaatatgagat
gcgttttcatttattaatgctgtctcttttctgtctttgtcagtaaggcc
ctcatactgaagcctattcccctgtatgttgtgtgcatgcatatcgacag
aatagtcagacctgagctgttctggaaacactccatcgaaacatt
ctattcataattgcaaaacaaaacaaaacaaaaactctattgcccaggag
tttgttaacaaacaagtttggacagtgcccattttttttttcaaatattt
tcaagttaatgattatcacacaaaaagccagcagtttatctcaaagcatt
tcctacgtatggaaacctggtccatatatatggctttatcactgggtgct
cataacattcctaagctaacggcttgacaaggtcacaggaaaaatagaag
acacagaatcatgcatttgaggactgtcaggagaaaaagatcaactgata
acaaatgcaaacacttcaaagatcgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_23066771_23067875
seq2: B6Ng01-285J21.b_44_1138

seq1  GAATTCAAGGTCAACCTGGGACTAAGCACATTCCAGATCCAGGTGTGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGTCAACCTGGGACTAAGCACATTCCAGATCCAGGTGTGGTG  50

seq1  GTGCACACTTTTAATCTGAGCCATACCTTGTGCTGGTGGCCTACATAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACACTTTTAATCTGAGCCATACCTTGTGCTGGTGGCCTACATAAAG  100

seq1  ACACTGGAAGAAGGAAGACTCACTCTTCTTCATGTGCTTGCACTTCCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGAAGAAGGAAGACTCACTCTTCTTCATGTGCTTGCACTTCCTTG  150

seq1  CCAGCACATCTGTTAGAACCTAATTCTTCAGGATTCCAGCTTATACAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACATCTGTTAGAACCTAATTCTTCAGGATTCCAGCTTATACAGAA  200

seq1  GACCAGGTAAGATAGCTAGCTTTGTGGCCTGAGCAACTACTAGACATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGTAAGATAGCTAGCTTTGTGGCCTGAGCAACTACTAGACATTTG  250

seq1  GACTTCCCATTCACAGCTGCCCATTGTTGGGTCACTTGGACTACAAGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCCATTCACAGCTGCCCATTGTTGGGTCACTTGGACTACAAGTTG  300

seq1  TAAGTCATTATAATAAATTCCTTTAATATATAGAGATATTCCATAAGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCATTATAATAAATTCCTTTAATATATAGAGATATTCCATAAGATC  350

seq1  TTTGACTCTAGAGAATCCTGAATAATACAGTCACATAATGGAATGTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTCTAGAGAATCCTGAATAATACAGTCACATAATGGAATGTTTAA  400

seq1  AGATTTAATTGAATAACAATAGTAAACAACAATGAATAATCTGAAGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAATTGAATAACAATAGTAAACAACAATGAATAATCTGAAGTAAA  450

seq1  CTCATTCCTGATATATCTGGGAGGAGCATGGACCCTCATTCCAAGAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCCTGATATATCTGGGAGGAGCATGGACCCTCATTCCAAGAATAA  500

seq1  TTCTGTGCTTTCAAGAAACTGAGGTCACAAGACTCCTGCCTTGTACTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGCTTTCAAGAAACTGAGGTCACAAGACTCCTGCCTTGTACTCTT  550

seq1  GGAGTGTTCTCACAAGCACTCAAAATTCTCCTCACACAACTTCCTTCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGTTCTCACAAGCACTCAAAATTCTCCTCACACAACTTCCTTCCTG  600

seq1  AACCCTGTTCTAAGAAGCTAGTATGCCTGAAGGCCTGGCTTCAATCCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGTTCTAAGAAGCTAGTATGCCTGAAGGCCTGGCTTCAATCCCCA  650

seq1  TCAGTTCATACAGCAGCCATAGAAGCCTCTGGAGAAAAGCAGAGGAAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCATACAGCAGCCATAGAAGCCTCTGGAGAAAAGCAGAGGAAGGA  700

seq1  GATCAGACACTTGAAGCCAACCATAGCTGTGTAGACACTTCCAGACCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGACACTTGAAGCCAACCATAGCTGTGTAGACACTTCCAGACCAAC  750

seq1  CTTGAATATCTGAGACCCTGTCAAAACATGAAATCAATAGAAGAGCATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATATCTGAGACCCTGTCAAAACATGAAATCAATAGAAGAGCATAA  800

seq1  AATAACCGTTCTCAACAATCTCCATCTTTGCTTTTGACTGCACAGGGGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCGTTCTCAACAATCTCCATCTTTGCTTTTGACTGCACAGGGGTC  850

seq1  CTAAATTCTCATTATCTTTAACTCATACATGAATTACAGAAAGTCAGGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTCTCATTATCTTTAACTCATACATGAATTACAGAAAGTCAGGTT  900

seq1  TTCAGGATCTTTCTAAATGGTCTCAGGGGTTTAGGACCATGAATATGAGA  950
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTCAGGATCTTTCTAAATGGTCTCA-GGGTTTAGGACCATGAATATGAGA  949

seq1  TGCGTTTTCATTTATTAATGCTGTCTCTTTTTCTGTTCTTTGTCAAGGTA  1000
      ||||||||||||||||||||||||||| ||||||| |||||||||  |||
seq2  TGCGTTTTCATTTATTAATGCTGTCTC-TTTTCTG-TCTTTGTCA--GTA  995

seq1  AGGCCCCCATACTGAAAGCCTATTTCCCCTGTATTGGTTGTGTGCATGCC  1050
      |||||| ||||||| ||||||| |||||||||||  |||||||||||| |
seq2  AGGCCCTCATACTG-AAGCCTA-TTCCCCTGTAT--GTTGTGTGCATG-C  1040

seq1  ATATCGACAG-ATAGTCCAGACCTGGAGCCTGTTCT-GAAACACTCCATC  1098
      |||||||||| ||||| ||||||| ||| ||||||| |||||||||||||
seq2  ATATCGACAGAATAGT-CAGACCT-GAG-CTGTTCTGGAAACACTCCATC  1087

seq1  G-AACATT  1105
      | ||||||
seq2  GAAACATT  1095

seq1: chr16_23186608_23186968
seq2: B6Ng01-285J21.g_70_430 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACGATCTTTGAAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACGATCTTTGAAGTG  50

seq1  TTTGCATTTGTTATCAGTTGATCTTTTTCTCCTGACAGTCCTCAAATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTTGTTATCAGTTGATCTTTTTCTCCTGACAGTCCTCAAATGCA  100

seq1  TGATTCTGTGTCTTCTATTTTTCCTGTGACCTTGTCAAGCCGTTAGCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTGTGTCTTCTATTTTTCCTGTGACCTTGTCAAGCCGTTAGCTTA  150

seq1  GGAATGTTATGAGCACCCAGTGATAAAGCCATATATATGGACCAGGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTTATGAGCACCCAGTGATAAAGCCATATATATGGACCAGGTTTC  200

seq1  CATACGTAGGAAATGCTTTGAGATAAACTGCTGGCTTTTTGTGTGATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACGTAGGAAATGCTTTGAGATAAACTGCTGGCTTTTTGTGTGATAAT  250

seq1  CATTAACTTGAAAATATTTGAAAAAAAAAATGGGCACTGTCCAAACTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAACTTGAAAATATTTGAAAAAAAAAATGGGCACTGTCCAAACTTGT  300

seq1  TTGTTAACAAACTCCTGGGCAATAGAGTTTTTGTTTTGTTTTGTTTTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAACAAACTCCTGGGCAATAGAGTTTTTGTTTTGTTTTGTTTTGCA  350

seq1  ATTATGAATAG  361
      |||||||||||
seq2  ATTATGAATAG  361