BAC Information

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BAC

Clone NameB6Ng01-286D10
Chromosome16 (Build37)
Map Location 80,955,783 - 81,068,921
singlet/doubletdoublet
Overlap genenone
Upstream gene1700066C05Rik, LOC621365, LOC100039724
Downstream geneNcam2, LOC621470, LOC435484, Pgk1-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286D10.bB6Ng01-286D10.g
ACCGA084468GA084469
length1,1591,144
definitionB6Ng01-286D10.b B6Ng01-286D10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,067,755 - 81,068,921)(80,955,783 - 80,956,925)
sequence
gaattcacttttagctttatgagttggaactggaagagctgccttgttct
caaactgccaataggttattaaggcattatcagaatagaaatgttattaa
tcaattaaggtaaatttggacatgagcactagagggcgcaaaaagaatgg
gttcagacccaggtttggtggaggcagtgatatcttccaatggaaaactt
gactgacatgttgagaagaactttacagttgaggggccaatgaaagtgtt
ctcggcagaaaatgcatctgcccaaatagcgagcagttatagagatatac
aagcaaggaaaattgtatcaatggatcattgatttcaatagcttagttac
caataataaaagcaaaatggacagatggaacttaattactaaatgtaaat
aatgatactaattagaaagttttggtggaattatatttctgtactgtagt
gcagaacaaattcaaggtagttgagtcattcactttctataacactgaaa
accattttgttcaaaaatgttaacatctttcttcaaatatatctgtttat
taatatgagagttagcttttattcccttaactagtagcatttgttgtcac
tatatgttatgttaagagacagggaattttatatgaatccaaccatatat
taagaagattaaacacactaaacatcataggacaaaatttttgaaaaggg
taaaaccttagcagttctgggagaagtgtgatagctattatttaggaaca
ttcttctttccattctttttgaggttgaggatcattggcacatacgttat
gaatctgcattgtgataattttcattgaattgtagattgctgttgataaa
atgcttcttaatgtgatatgaatgtacatttgtttttctatcttcaaaac
tctttgaaatatatggaagacaaatacttaattgactcagtgtgcaccca
gtgagagcaagtattaaatgagagttcactgaaaatgaaaactcttcctt
taaacccatactacctcacatgggaagcagtaactagggaaatgcttgga
catacaaatgtatatttcttcaatagtaatgatcatgggaaattatgaag
tgaatacaactacatatgatgatgttctctgaactgcaaacttactcact
taagagaga
gaattcccattttaaaaagcatgagttatcagcaatgcttacaaaaaaaa
tccaaatatttcccctgcccataaaacataatgtaaaaacaaaaacaaaa
aactgaagaaaaaaaaagcaggaaaaaagaagagtaataacagcagcaac
aacaactatattgtttactaaagcttaaatagcccttctatgcttctgag
ttacagtcccatgttggtttaataagaagagcctagatgcctggatattt
ttagttcataatatttaagaacttgtatagaaaaaaacaacaacaaagac
aacccagtttttgttttgttttcaaatgttacaaactattctagtgtgtc
tgccatgttttctccaaacatgtcagccactggaaaacatattcctgttg
agagtattcatctggggggtaaactgtactttattaaggggtccccaggt
atccctaatcgatggacctgtccaaagtgattgtggtgcctatattggag
aatccagtctggggtgaaagaaaaatctggggtgaaagaaaaaaatgtgg
cggtgaaggctgaggctgtgtccctgaccatgatctgaaatgtggaggct
gagactggaattatgaagactggacaaggacacctagttaccacacctag
ttactaagggatatggtgatctgttggagcagatgctaggcctatggctg
tctttgaacatgtgctactagggacatatttgattctgttgtcctgtgat
ccaattattgctccacctcttgctcctgcagaatccactgctaaagggcg
ggatagatgttcaggtactgtctcctcggaggtcaggctttcccagctgg
acaacctattccatctgagtagccatctgggattatggagttgccctagg
tggagaaatactgtagcctgcattgttgctagagaagacatagcttgtta
cagtgccattagttacaaccaacaacacaacagggaacacaacagggaca
caattaactaatagcagtgctatcatgccaggaacaatggcagaaccaca
gccagttcagaaggcttgcagggaccgaccttgaaggcacgtgatgtaca
tattatttttgaaaaatacatttggtacttgttattttttttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_81067755_81068921
seq2: B6Ng01-286D10.b_46_1204 (reverse)

seq1  TCTCTCTT-AGTGAGTAAAGTTTTGCAGTTCAGAG-ACATCATCTATATT  48
      |||||||| |||||||||   |||||||||||||| |||||||| |||  
seq2  TCTCTCTTAAGTGAGTAA--GTTTGCAGTTCAGAGAACATCATC-ATA--  45

seq1  GTTTAGTTGTATTCACTTCATAATTTTCCAATGATCATTACTTATTGAAG  98
       | |||||||||||||||||||| ||||| ||||||||||| ||||||||
seq2  -TGTAGTTGTATTCACTTCATAA-TTTCCCATGATCATTAC-TATTGAAG  92

seq1  AAATATTACATTTGTATGGTCCAAGCATTCCCCTAGTTTACTGCTT-CCA  147
      ||||| ||||||||||| ||||||||||| |||||| ||||||||| |||
seq2  AAATA-TACATTTGTAT-GTCCAAGCATTTCCCTAG-TTACTGCTTCCCA  139

seq1  TGTGAGGTAGTATGGGTTTAAAGGAAGAGTTTTCATTTTCAGTGAACTCT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGTAGTATGGGTTTAAAGGAAGAGTTTTCATTTTCAGTGAACTCT  189

seq1  CATTTAATACTTGCTCTCACTGGGTGCACACTGAGTCAATTAAGTATTTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATACTTGCTCTCACTGGGTGCACACTGAGTCAATTAAGTATTTG  239

seq1  TCTTCCATATATTTCAAAGAGTTTTGAAGATAGAAAAACAAATGTACATT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCATATATTTCAAAGAGTTTTGAAGATAGAAAAACAAATGTACATT  289

seq1  CATATCACATTAAGAAGCATTTTATCAACAGCAATCTACAATTCAATGAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCACATTAAGAAGCATTTTATCAACAGCAATCTACAATTCAATGAA  339

seq1  AATTATCACAATGCAGATTCATAACGTATGTGCCAATGATCCTCAACCTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCACAATGCAGATTCATAACGTATGTGCCAATGATCCTCAACCTC  389

seq1  AAAAAGAATGGAAAGAAGAATGTTCCTAAATAATAGCTATCACACTTCTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAATGGAAAGAAGAATGTTCCTAAATAATAGCTATCACACTTCTC  439

seq1  CCAGAACTGCTAAGGTTTTACCCTTTTCAAAAATTTTGTCCTATGATGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACTGCTAAGGTTTTACCCTTTTCAAAAATTTTGTCCTATGATGTT  489

seq1  TAGTGTGTTTAATCTTCTTAATATATGGTTGGATTCATATAAAATTCCCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTGTTTAATCTTCTTAATATATGGTTGGATTCATATAAAATTCCCT  539

seq1  GTCTCTTAACATAACATATAGTGACAACAAATGCTACTAGTTAAGGGAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTAACATAACATATAGTGACAACAAATGCTACTAGTTAAGGGAAT  589

seq1  AAAAGCTAACTCTCATATTAATAAACAGATATATTTGAAGAAAGATGTTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTAACTCTCATATTAATAAACAGATATATTTGAAGAAAGATGTTA  639

seq1  ACATTTTTGAACAAAATGGTTTTCAGTGTTATAGAAAGTGAATGACTCAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTGAACAAAATGGTTTTCAGTGTTATAGAAAGTGAATGACTCAA  689

seq1  CTACCTTGAATTTGTTCTGCACTACAGTACAGAAATATAATTCCACCAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTTGAATTTGTTCTGCACTACAGTACAGAAATATAATTCCACCAAA  739

seq1  ACTTTCTAATTAGTATCATTATTTACATTTAGTAATTAAGTTCCATCTGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTAATTAGTATCATTATTTACATTTAGTAATTAAGTTCCATCTGT  789

seq1  CCATTTTGCTTTTATTATTGGTAACTAAGCTATTGAAATCAATGATCCAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTGCTTTTATTATTGGTAACTAAGCTATTGAAATCAATGATCCAT  839

seq1  TGATACAATTTTCCTTGCTTGTATATCTCTATAACTGCTCGCTATTTGGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACAATTTTCCTTGCTTGTATATCTCTATAACTGCTCGCTATTTGGG  889

seq1  CAGATGCATTTTCTGCCGAGAACACTTTCATTGGCCCCTCAACTGTAAAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCATTTTCTGCCGAGAACACTTTCATTGGCCCCTCAACTGTAAAG  939

seq1  TTCTTCTCAACATGTCAGTCAAGTTTTCCATTGGAAGATATCACTGCCTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTCAACATGTCAGTCAAGTTTTCCATTGGAAGATATCACTGCCTC  989

seq1  CACCAAACCTGGGTCTGAACCCATTCTTTTTGCGCCCTCTAGTGCTCATG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAACCTGGGTCTGAACCCATTCTTTTTGCGCCCTCTAGTGCTCATG  1039

seq1  TCCAAATTTACCTTAATTGATTAATAACATTTCTATTCTGATAATGCCTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATTTACCTTAATTGATTAATAACATTTCTATTCTGATAATGCCTT  1089

seq1  AATAACCTATTGGCAGTTTGAGAACAAGGCAGCTCTTCCAGTTCCAACTC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCTATTGGCAGTTTGAGAACAAGGCAGCTCTTCCAGTTCCAACTC  1139

seq1  ATAAAGCTAAAAGTGAATTC  1167
      ||||||||||||||||||||
seq2  ATAAAGCTAAAAGTGAATTC  1159

seq1: chr16_80955783_80956925
seq2: B6Ng01-286D10.g_69_1212

seq1  GAATTCCCATTTTAAAAAGCATGAGTTATCAGCAATGCTTACAAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTTTAAAAAGCATGAGTTATCAGCAATGCTTACAAAAAAAA  50

seq1  TCCAAATATTTCCCCTGCCCATAAAACATAATGTAAAAACAAAAACAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATATTTCCCCTGCCCATAAAACATAATGTAAAAACAAAAACAAAA  100

seq1  AACTGAAGAAAAAAAAAGCAGGAAAAAAGAAGAGTAATAACAGCAGCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGAAAAAAAAAGCAGGAAAAAAGAAGAGTAATAACAGCAGCAAC  150

seq1  AACAACTATATTGTTTACTAAAGCTTAAATAGCCCTTCTATGCTTCTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTATATTGTTTACTAAAGCTTAAATAGCCCTTCTATGCTTCTGAG  200

seq1  TTACAGTCCCATGTTGGTTTAATAAGAAGAGCCTAGATGCCTGGATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTCCCATGTTGGTTTAATAAGAAGAGCCTAGATGCCTGGATATTT  250

seq1  TTAGTTCATAATATTTAAGAACTTGTATAGAAAAAAACAACAACAAAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCATAATATTTAAGAACTTGTATAGAAAAAAACAACAACAAAGAC  300

seq1  AACCCAGTTTTTGTTTTGTTTTCAAATGTTACAAACTATTCTAGTGTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGTTTTTGTTTTGTTTTCAAATGTTACAAACTATTCTAGTGTGTC  350

seq1  TGCCATGTTTTCTCCAAACATGTCAGCCACTGGAAAACATATTCCTGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGTTTTCTCCAAACATGTCAGCCACTGGAAAACATATTCCTGTTG  400

seq1  AGAGTATTCATCTGGGGGGTAAACTGTACTTTATTAAGGGGTCCCCAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATTCATCTGGGGGGTAAACTGTACTTTATTAAGGGGTCCCCAGGT  450

seq1  ATCCCTAATCGATGGACCTGTCCAAAGTGATTGTGGTGCCTATATTGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTAATCGATGGACCTGTCCAAAGTGATTGTGGTGCCTATATTGGAG  500

seq1  AATCCAGTCTGGGGTGAAAGAAAAATCTGGGGTGAAAGAAAAAAATGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGTCTGGGGTGAAAGAAAAATCTGGGGTGAAAGAAAAAAATGTGG  550

seq1  CGGTGAAGGCTGAGGCTGTGTCCCTGACCATGATCTGAAATGTGGAGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGAAGGCTGAGGCTGTGTCCCTGACCATGATCTGAAATGTGGAGGCT  600

seq1  GAGACTGGAATTATGAAGACTGGACAAGGACACCTAGTTACCACACCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGGAATTATGAAGACTGGACAAGGACACCTAGTTACCACACCTAG  650

seq1  TTACTAAGGGATATGGTGATCTGTTGGAGCAGATGCTAGGCCTATGGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAGGGATATGGTGATCTGTTGGAGCAGATGCTAGGCCTATGGCTG  700

seq1  TCTTTGAACATGTGCTACTAGGGACATATTTGATTCTGTTGTCCTGTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAACATGTGCTACTAGGGACATATTTGATTCTGTTGTCCTGTGAT  750

seq1  CCAATTATTGCTCCACCTCTTGCTCCTGCAGAATCCACTGCTAAAGGGCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTATTGCTCCACCTCTTGCTCCTGCAGAATCCACTGCTAAAGGGCG  800

seq1  GGATAGATGTTCAGGTACTGTCTCCTCGGAGGTCAGGCTTTCCCAGCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGATGTTCAGGTACTGTCTCCTCGGAGGTCAGGCTTTCCCAGCTGG  850

seq1  ACAACCTATTCCATCTGAGTAGCCATCTGGGA-TATGGAGTTGCCCTAGG  899
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACAACCTATTCCATCTGAGTAGCCATCTGGGATTATGGAGTTGCCCTAGG  900

seq1  TGGAGAAATACTGTAGCCTGCATTGTTGCTAGAGAAGACATAGC-TGTTA  948
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGGAGAAATACTGTAGCCTGCATTGTTGCTAGAGAAGACATAGCTTGTTA  950

seq1  CAGTGGCATTAGTAACAA-CAACAACAACAACAGGAACAACAACAGGAAC  997
      ||||| ||||||| |||| ||||||| |||||||| |  |||||||| ||
seq2  CAGTGCCATTAGTTACAACCAACAAC-ACAACAGGGAACACAACAGGGAC  999

seq1  AACAAAATAACTAATAAGCAGTGCTATCATGCCAGGAAC-ATGGCAGAA-  1045
      |   || |||||||| ||||||||||||||||||||||| ||||||||| 
seq2  A--CAATTAACTAAT-AGCAGTGCTATCATGCCAGGAACAATGGCAGAAC  1046

seq1  CACAGCCAGTTCCAGAAG--CTGCAGGGACCGACC-TGAAGGCCAACGTG  1092
      ||||||||||| ||||||   |||||||||||||| |||||||  |||||
seq2  CACAGCCAGTT-CAGAAGGCTTGCAGGGACCGACCTTGAAGGC--ACGTG  1093

seq1  AATGTACATTATA-TTTTGAAAAATACATTT-GTACTTTGTTATTTTTTT  1140
       ||||||||  || ||||||||||||||||| |||| |||||||||||||
seq2  -ATGTACATATTATTTTTGAAAAATACATTTGGTAC-TTGTTATTTTTTT  1141

seq1  TCA  1143
      |||
seq2  TCA  1144