BAC Information

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BAC

Clone NameB6Ng01-288D23
Chromosome16 (Build37)
Map Location 54,584,990 - 54,586,075
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433027, LOC100043442
Downstream geneLOC100043449, LOC667927, LOC436421, Zpld1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288D23.bB6Ng01-288D23.g
ACCGA085961GA085962
length1,0891,184
definitionB6Ng01-288D23.b B6Ng01-288D23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctatctccttaggggctgcaaccatttctcctattcctccataa
tagtctcctagccccatccactctttggctgtgggtgtgtgcatctgggt
gagtcagttgatgaatggaggtgtctatgggtgtaacagagtatcataaa
tagtttcagggattagtacttgtctatggggtggaacacaagttgggcaa
attattggttgtcctttccctcagtctctcttccataccaaatccctgca
tttcttgaagataggataccttttgggtcagaagttttttaagtgggttg
gtgtccctattgctttattatttggaactaacatagatctcacacaacaa
aaatggcattgaattagttgagattttttataaattcaagtactagaaat
acatgtttaacacattttcaatgataaatcactacctcctacttccctta
aaacgaaattcaaaaatgccatcatttattatagtgacaagactcagata
ggattgaaaaggaaaaaaggaggtttcctcccaagtaaaatctcttgaat
tttttagcagttaatttgctgccatacttaaagcatgtggaaatgatgta
gtagtacatactagcaacatcccttgctaattctaaataagctaaattct
ctaaacaaattggcagcttacttacagggcctattaaatatgacaagaag
cagttttattgcaaaaggacactgtttaaacaatattgcaaattagagtt
gtgtgtaaatacaatacagaccacatttgatttccttctagttctttttc
agggtcatgtctatttaatgatcagaacagagagtcatgaaaatgctacc
aagtatattgcattttctctaaaacaagcatatgtgtcgggaaatgtgaa
aattctaagtcaatatttcctcctctttaatctgtacctgatacagtaat
attaatttcaatgaaaattaggatataatttctcattgatagtcagagga
atgtttttccaacaccactgattgttttgttaaataaatacaaataaaac
ttaacattctagtcctcctgctttcacagaggcaatggc

gaattctctgtgagttctctaccactatgtatgcctgggtgctattatga
tgataatggactatacctttgaaactataagccagccccaaataaatgct
ttcttttataagagttcctgtggtcatggtttcatagccatagaatggtg
gctaagacaacgttcttaattgtactctgtattttatttattacagcttt
atttgttttcctttgagatcacttggatactcttgtaactctgatcagcc
aaggaatacactctttagaattggtttgatggaggtgaatgctttttagg
ctgttcatgtaatggaaagttttactttttccttcaattgcaataataat
tctgagtacagtagtctaggttgccattcccggtcttgtagaatataaac
gcattgtcccaatctctttggtgttcaaagtttctattgaattaccagct
gttgttctgacaggtgttatatgtcgcttgtattcttccccttgacgctt
ccaatattcctgttttattttacatacttcttgttttaactatgatgtgt
tattggggagtttcttttctggtcatgtctatttggtgttctatgttctt
gtcctttatgggcatgtctagccttggtttggagtaattttcttttcttt
ttgaaaatattgtctatgccattgatctggattttttctctctcactaat
gctaaaaattttaaatttggacttttcttcatagtgtatatatttcctgt
ggctttcttttctgtttcttaaaattttttttcatagtctttggttattt
gctactttacatttcagaggtgacattttgtctacttgctccattctacc
tgtaaagttttctcttgtgttttctagttgggttattgagtttttcaatt
ccatctttacctaagcttgaattctcttcattatatgtaactttttttat
tgaatccagctctccaatcttcagctgtctttggtatttcatcagccttc
ttctgtttgtgttttcttgcaacatcacacgggaacttatctctttaaat
catacccttctaagtcatgtttaaagttccattggagaattttccttgtg
ttcttacctctgaatcatgttaaaagctattgccgtactttcaggctggg
tactagggaggtttacagtctcatggaggtcgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_54584990_54586075
seq2: B6Ng01-288D23.b_46_1134

seq1  GAATTCCTATCTCCTTAGGGGCTGCAACCATTTCTCCTATTCCTCCATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATCTCCTTAGGGGCTGCAACCATTTCTCCTATTCCTCCATAA  50

seq1  TAGTCTCCTAGCCCCATCCACTCTTTGGCTGTGGGTGTGTGCATCTGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTCCTAGCCCCATCCACTCTTTGGCTGTGGGTGTGTGCATCTGGGT  100

seq1  GAGTCAGTTGATGAATGGAGGTGTCTATGGGTGTAACAGAGTATCATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGTTGATGAATGGAGGTGTCTATGGGTGTAACAGAGTATCATAAA  150

seq1  TAGTTTCAGGGATTAGTACTTGTCTATGGGGTGGAACACAAGTTGGGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCAGGGATTAGTACTTGTCTATGGGGTGGAACACAAGTTGGGCAA  200

seq1  ATTATTGGTTGTCCTTTCCCTCAGTCTCTCTTCCATACCAAATCCCTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGGTTGTCCTTTCCCTCAGTCTCTCTTCCATACCAAATCCCTGCA  250

seq1  TTTCTTGAAGATAGGATACCTTTTGGGTCAGAAGTTTTTTAAGTGGGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGAAGATAGGATACCTTTTGGGTCAGAAGTTTTTTAAGTGGGTTG  300

seq1  GTGTCCCTATTGCTTTATTATTTGGAACTAACATAGATCTCACACAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCCTATTGCTTTATTATTTGGAACTAACATAGATCTCACACAACAA  350

seq1  AAATGGCATTGAATTAGTTGAGATTTTTTATAAATTCAAGTACTAGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCATTGAATTAGTTGAGATTTTTTATAAATTCAAGTACTAGAAAT  400

seq1  ACATGTTTAACACATTTTCAATGATAAATCACTACCTCCTACTTCCCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTTAACACATTTTCAATGATAAATCACTACCTCCTACTTCCCTTA  450

seq1  AAACGAAATTCAAAAATGCCATCATTTATTATAGTGACAAGACTCAGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGAAATTCAAAAATGCCATCATTTATTATAGTGACAAGACTCAGATA  500

seq1  GGATTGAAAAGGAAAAAAGGAGGTTTCCTCCCAAGTAAAATCTCTTGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGAAAAGGAAAAAAGGAGGTTTCCTCCCAAGTAAAATCTCTTGAAT  550

seq1  TTTTTAGCAGTTAATTTGCTGCCATACTTAAAGCATGTGGAAATGATGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGCAGTTAATTTGCTGCCATACTTAAAGCATGTGGAAATGATGTA  600

seq1  GTAGTACATACTAGCAACATCCCTTGCTAATTCTAAATAAGCTAAATTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTACATACTAGCAACATCCCTTGCTAATTCTAAATAAGCTAAATTCT  650

seq1  CTAAACAAATTGGCAGCTTACTTACAGGGCCTATTAAATATGACAAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAAATTGGCAGCTTACTTACAGGGCCTATTAAATATGACAAGAAG  700

seq1  CAGTTTTATTGCAAAAGGACACTGTTTAAACAATATTGCAAATTAGAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTATTGCAAAAGGACACTGTTTAAACAATATTGCAAATTAGAGTT  750

seq1  GTGTGTAAATACAATACAGACCACATTTGATTTCCTTCTAGTTCTTTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTAAATACAATACAGACCACATTTGATTTCCTTCTAGTTCTTTTTC  800

seq1  AGGGTCATGTCTATTTAATGATCAGAACAGAGAGTCATGAAAATGCTACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCATGTCTATTTAATGATCAGAACAGAGAGTCATGAAAATGCTACC  850

seq1  AAGTATATTGCATTTTCTCTAAAACAAGCATATGTGTCGGGAAATGTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATATTGCATTTTCTCTAAAACAAGCATATGTGTCGGGAAATGTGAA  900

seq1  AATTCTAAGTCAATATTTCCTCCTCTTTAATCTGTACCTGATACAGTAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAAGTCAATATTTCCTCCTCTTTAATCTGTACCTGATACAGTAAT  950

seq1  ATTAATTTCAATGAAAATTAGGATATAATTTCTCATTGATAAGTCAAGAG  1000
      |||||||||||||||||||||||||||||||||||||||| |||| ||||
seq2  ATTAATTTCAATGAAAATTAGGATATAATTTCTCATTGAT-AGTC-AGAG  998

seq1  GAATGTTTT--CCACA-CACTGATTGTTTTG-TAAATAAATACAAATAAA  1046
      |||||||||  | ||| |||||||||||||| ||||||||||||||||||
seq2  GAATGTTTTTCCAACACCACTGATTGTTTTGTTAAATAAATACAAATAAA  1048

seq1  AC-TAACATTCTAGTCCTCCTGCTTTCACAGAGGCCATGGC  1086
      || |||||||||||||||||||||||||||||||| |||||
seq2  ACTTAACATTCTAGTCCTCCTGCTTTCACAGAGGCAATGGC  1089


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