BAC Information

Click to search

BAC

Clone NameB6Ng01-289N22
Chromosome16 (Build37)
Map Location 68,925,547 - 68,926,625
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626609
Downstream geneSpeer2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289N22.bB6Ng01-289N22.g
ACCGA087153GA087154
length9381,072
definitionB6Ng01-289N22.b B6Ng01-289N22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggcagagaagcatatgaaaaaatg
ttcagcatccttaatcatcagggaaatgcagatcataacaaacctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agaagctagcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactactggaggatcccacaatacctctcctgggc
atatatccagaagatgtcccaactattaagacagacacatgctccactat
gttcatagcagccttatttataatagccagaagctagaaagaacccagat
gctcctcaacagagcaatagatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagggaa
atggatggaccaggagggtatcatcctgagtgaggtaacctaatcacaaa
ggaactctcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaatttgctaaacgcatgaaactcaa
gaagaacaagaccaaagtgtggacactttgccccttcttagaattgggaa
caaaacacccatgggaggagttacagagacaaagtttggagttgtgacaa
aaggatggaccatctagagactgccatatctggggatccatcccataatc
agcttccaaaagctgtcaccattgcatatactagcaagattttgctgaaa
tgactcagatatagctgtcacttgtgagactatgccgcggcctagcaaac
agagaagtggatgctcacagtcagctattggatgggtc

gaattcatattactcctatttacatatagcattattaaactggcatttat
tttcaattattaggatataggatttaccactctcttatgatatttttcca
aaacatcaatatttctacattagttgtaacaattcctatttcaatctgat
caaactgattttttttctgtaaaagtaatttttatttgcctaatgcaatt
gtcatctcagagacttcctcttgaacagtctcagtctgtaaaatttttct
ctgatttgttactttgtctacccctcaattagacatcatttttttttttt
gtattagtgtgtactaagggcatgtctatattccagccagaggaattaat
agtgtgtggtatgtctacataggaggacattgttatcattacttacttta
tgattatatcttaaatttatttaataataccatgagatttatccactttt
taagttaattaaataactatatgcaaaataaaatgttatagcaaaatggt
ttaacaaataaaacattttgttaagtattttctttatgtatacttcaaat
gttattatcccctttcctgctttcccctccaaaaaccctctacccacccc
catcccgctctccaacccatatactcccccttccttgccttggcaatcac
ctatactggggcataaagccttcacaggaccaagggccgttcatcccatt
gataatctactgggccatcctctgctacacatgcagctatagccatgagt
cccaccatgtgttttctttggttggtggtttagtctccagaagctctggg
ggtactggttagttcatattgttgttcctcctatggggatgcaaactcct
tccgccccttgggtcctttctctagctccatcattgggcaccctgtgctc
agtccaatgggatgctgtgagcatccactttgtatttgtcacaaataact
tttttatgtcaatctgatgactgactttgttggggatccaatgtagatag
aagaagtcatcgtcttgtgtttctagtatactctagaatatggcatggcc
attacaaaaaccgtatgctaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_68925547_68926625
seq2: B6Ng01-289N22.g_67_1138 (reverse)

seq1  TTTAGCATA-GGTTTTTGTAATGGGCATG-CATATTCTAGAGTATACTTA  48
      ||||||||| |||||||||||||| |||| ||||||||||||||||||  
seq2  TTTAGCATACGGTTTTTGTAATGGCCATGCCATATTCTAGAGTATACTAG  50

seq1  GAACAC-AGACGATGACCTTTCTCTCCTTCTACCATTTGGATCCCCAAAA  97
       ||||| ||||||||||  |||| ||  |||||   ||||||||||  ||
seq2  AAACACAAGACGATGAC--TTCT-TCTATCTAC--ATTGGATCCCC--AA  93

seq1  CAAAGTTCAGGTCATCAAGATTGACATAAAAAGTTTATTTGTGACAAATA  147
      ||||| ||| |||||| |||||||||||||||  ||||||||||||||||
seq2  CAAAG-TCA-GTCATC-AGATTGACATAAAAAAGTTATTTGTGACAAATA  140

seq1  CAAAGGTGGATGCTCACAGCATCCCATTGGACTGAGCACAGGGTGCCCAA  197
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAA-GTGGATGCTCACAGCATCCCATTGGACTGAGCACAGGGTGCCCAA  189

seq1  TGATGGAGCTAGAGAAAGGA-CCAAGGGGCGGAAGGAGTTTGCATCCCCA  246
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGATGGAGCTAGAGAAAGGACCCAAGGGGCGGAAGGAGTTTGCATCCCCA  239

seq1  TAGGAGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTTCTGGAGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTTCTGGAGA  289

seq1  CTAAACCACCAACCAAAGAAAACACATGGTGGGACTCATGGCTATAGCTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACCACCAACCAAAGAAAACACATGGTGGGACTCATGGCTATAGCTG  339

seq1  CATGTGTAGCAGAGGATGGCCCAGTAGATTATCAATGGGATGAACGGCCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTAGCAGAGGATGGCCCAGTAGATTATCAATGGGATGAACGGCCC  389

seq1  TTGGTCCTGTGAAGGCTTTATGCCCCAGTATAGGTGATTGCCAAGGCAAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCCTGTGAAGGCTTTATGCCCCAGTATAGGTGATTGCCAAGGCAAG  439

seq1  GAAGGGGGAGTATATGGGTTGGAGAGCGGGATGGGGGTGGGTAGAGGGTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGGAGTATATGGGTTGGAGAGCGGGATGGGGGTGGGTAGAGGGTT  489

seq1  TTTGGAGGGGAAAGCAGGAAAGGGGATAATAACATTTGAAGTATACATAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGGGGAAAGCAGGAAAGGGGATAATAACATTTGAAGTATACATAA  539

seq1  AGAAAATACTTAACAAAATGTTTTATTTGTTAAACCATTTTGCTATAACA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATACTTAACAAAATGTTTTATTTGTTAAACCATTTTGCTATAACA  589

seq1  TTTTATTTTGCATATAGTTATTTAATTAACTTAAAAAGTGGATAAATCTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTGCATATAGTTATTTAATTAACTTAAAAAGTGGATAAATCTC  639

seq1  ATGGTATTATTAAATAAATTTAAGATATAATCATAAAGTAAGTAATGATA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATTATTAAATAAATTTAAGATATAATCATAAAGTAAGTAATGATA  689

seq1  ACAATGTCCTCCTATGTAGACATACCACACACTATTAATTCCTCTGGCTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTCCTCCTATGTAGACATACCACACACTATTAATTCCTCTGGCTG  739

seq1  GAATATAGACATGCCCTTAGTACACACTAATACAAAAAAAAAAAATGATG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAGACATGCCCTTAGTACACACTAATACAAAAAAAAAAAATGATG  789

seq1  TCTAATTGAGGGGTAGACAAAGTAACAAATCAGAGAAAAATTTTACAGAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTGAGGGGTAGACAAAGTAACAAATCAGAGAAAAATTTTACAGAC  839

seq1  TGAGACTGTTCAAGAGGAAGTCTCTGAGATGACAATTGCATTAGGCAAAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTGTTCAAGAGGAAGTCTCTGAGATGACAATTGCATTAGGCAAAT  889

seq1  AAAAATTACTTTTACAGAAAAAAAATCAGTTTGATCAGATTGAAATAGGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTACTTTTACAGAAAAAAAATCAGTTTGATCAGATTGAAATAGGA  939

seq1  ATTGTTACAACTAATGTAGAAATATTGATGTTTTGGAAAAATATCATAAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTACAACTAATGTAGAAATATTGATGTTTTGGAAAAATATCATAAG  989

seq1  AGAGTGGTAAATCCTATATCCTAATAATTGAAAATAAATGCCAGTTTAAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGTAAATCCTATATCCTAATAATTGAAAATAAATGCCAGTTTAAT  1039

seq1  AATGCTATATGTAAATAGGAGTAATATGAATTC  1079
      |||||||||||||||||||||||||||||||||
seq2  AATGCTATATGTAAATAGGAGTAATATGAATTC  1072


| Home | SequenceCutter | Blast | Download |