BAC Information

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BAC

Clone NameB6Ng01-291I24
Chromosome16 (Build37)
Map Location 71,062,776 - 71,063,905
singlet/doubletsinglet
Overlap genenone
Upstream geneEG664930, Gbe1, D16Ertd519e, LOC100039231
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291I24.bB6Ng01-291I24.g
ACCGA088415GA088416
length7471,161
definitionB6Ng01-291I24.b B6Ng01-291I24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgcaccccatttttaaatagggttatttgttt
ctctggagtctaacttcttgagttctttgtatatattgggtattagcctg
ctatcagatgtaggattggtaaagatcttttcccaatctgttggttgcct
ttttgttttattgacagtgtcttttgccttacagaagctttgcaattttg
tgaggtaccatttgttgatacttgatcttagaggacaaaccattggtgtt
ctgttcagggaattttcctgtatccatgttttcaaggctttcccccactt
tcttttctattactttcagtgtatctggttttatgtggaggatcttgatc
cacttggacttgagctttgtacaaggagttaagaatgaattgatttgcat
tccacttgctaacctccaggtgaaccagcactatttgttgaaaatactgt
cttttttccactggatagttttagctccttcaaagatcaagtgagcatag
atgtgtgggttcatttctgggtcttcaattctattccattgatttaccac
agtaccaataccatacactttttatcactattgctctattgtttagctca
aggtcagcaatggtgattttcccataagttcttttattgttgagaatagt
tttcactaccttagttttatttgttattccagacgaatttgcaaattgcc
ctttctaactcggtgaggaattgagttgggattttgatggggattgc

gaattctcttcttcacatctagcttatcacccatacaggtatcccataca
attggatacaaatacaattcaaagtattttatatttcattagtaaagtta
gctaaacttggctctcacaattacaaagagggttgttgaatcaccaaaat
gaattttcccttcagtgtgtcactggcttttggaaaagtcagggactttt
ctaaggacactaaaaatgtatctgcttttgattagaaatagagtcctcac
atttgattacagaagagcgccactcaaataactcagatgttttgcaggct
cagcctttttacaaagagcactgattttcataaatgctcacttccgattt
agagcccactagaaacccctgagggcttccatctgaaggagccaggccat
ttccatgaaagccttgtgcttacaacgctccctgtgcaattatgcttctt
gtatttgacccacttctctaagactgaatgatgacatcatgtctgagtgt
gctgagaagagctattccaggtcacagagtcttaacttccacatcactaa
caagagtttgtcactgagccttcagtagaagattctgataacacagtgaa
ggtctcatgcaaccaaatcaatgtcatgaaatatttttcttgttttctaa
ttttctcattctgtgcttcccaaacacagatattttattttgcatacaag
ctcaggatttcagattaattaaacttcgtggtagaaaaagctgattcctt
ccactacagacacggaagaactgattagatatgtgcagacagcaatttgt
tctaatggtttatctttgttcctaacaatttttgcttgtgtatatttcca
cctgttaaattactctataatttactgtttcctgccatttgacaagaaaa
cattacaatcacaataaaaggtaatttaaggctattaccaatcaatgaaa
gatgtccagtctaaaatgagatggaaatatttatggggatttccagtcac
atagaatgcagattattcacagggggaatgactcctgcaaactgcagcat
catatattttcttatagtcttcacagcctgaaacaatgtcaatatcacga
gcatagtaaattctgtcaagctgagacttacaataatgctggcaaagaag
gaaattctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_71062776_71063905
seq2: B6Ng01-291I24.g_67_1227

seq1  GAATTCTCTTCTTCACATCTAGCTTATCACCCATACAGGTATCCCATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTTCACATCTAGCTTATCACCCATACAGGTATCCCATACA  50

seq1  ATTGGATACAAATACAATTCAAAGTATTTTATATTTCATTAGTAAAGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATACAAATACAATTCAAAGTATTTTATATTTCATTAGTAAAGTTA  100

seq1  GCTAAACTTGGCTCTCACAATTACAAAGAGGGTTGTTGAATCACCAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAACTTGGCTCTCACAATTACAAAGAGGGTTGTTGAATCACCAAAAT  150

seq1  GAATTTTCCCTTCAGTGTGTCACTGGCTTTTGGAAAAGTCAGGGACTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTCCCTTCAGTGTGTCACTGGCTTTTGGAAAAGTCAGGGACTTTT  200

seq1  CTAAGGACACTAAAAATGTATCTGCTTTTGATTAGAAATAGAGTCCTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGACACTAAAAATGTATCTGCTTTTGATTAGAAATAGAGTCCTCAC  250

seq1  ATTTGATTACAGAAGAGCGCCACTCAAATAACTCAGATGTTTTGCAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATTACAGAAGAGCGCCACTCAAATAACTCAGATGTTTTGCAGGCT  300

seq1  CAGCCTTTTTACAAAGAGCACTGATTTTCATAAATGCTCACTTCCGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTTTTACAAAGAGCACTGATTTTCATAAATGCTCACTTCCGATTT  350

seq1  AGAGCCCACTAGAAACCCCTGAGGGCTTCCATCTGAAGGAGCCAGGCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCCACTAGAAACCCCTGAGGGCTTCCATCTGAAGGAGCCAGGCCAT  400

seq1  TTCCATGAAAGCCTTGTGCTTACAACGCTCCCTGTGCAATTATGCTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGAAAGCCTTGTGCTTACAACGCTCCCTGTGCAATTATGCTTCTT  450

seq1  GTATTTGACCCACTTCTCTAAGACTGAATGATGACATCATGTCTGAGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGACCCACTTCTCTAAGACTGAATGATGACATCATGTCTGAGTGT  500

seq1  GCTGAGAAGAGCTATTCCAGGTCACAGAGTCTTAACTTCCACATCACTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAAGAGCTATTCCAGGTCACAGAGTCTTAACTTCCACATCACTAA  550

seq1  CAAGAGTTTGTCACTGAGCCTTCAGTAGAAGATTCTGATAACACAGTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTTTGTCACTGAGCCTTCAGTAGAAGATTCTGATAACACAGTGAA  600

seq1  GGTCTCATGCAACCAAATCAATGTCATGAAATATTTTTCTTGTTTTCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCATGCAACCAAATCAATGTCATGAAATATTTTTCTTGTTTTCTAA  650

seq1  TTTTCTCATTCTGTGCTTCCCAAACACAGATATTTTATTTTGCATACAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCATTCTGTGCTTCCCAAACACAGATATTTTATTTTGCATACAAG  700

seq1  CTCAGGATTTCAGATTAATTAAACTTCGTGGTAGAAAAAGCTGATTCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGATTTCAGATTAATTAAACTTCGTGGTAGAAAAAGCTGATTCCTT  750

seq1  CCACTACAGACACGGAAGAACTGATTAGATATGTGCAGACAGCAATTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTACAGACACGGAAGAACTGATTAGATATGTGCAGACAGCAATTTGT  800

seq1  TCTAATGGTTTATCTTTGTTCCTAACAATTTTTGCTTGTGTATATTTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATGGTTTATCTTTGTTCCTAACAATTTTTGCTTGTGTATATTTCCA  850

seq1  CCTGTTAAATTACTCTATAATTTACTGTTTCCTGCCATTTGACAAGAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTAAATTACTCTATAATTTACTGTTTCCTGCCATTTGACAAGAAAA  900

seq1  CATTACAATCACAATAAAAGGTAATTTAAGGCTATTACCAATCAATGAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAATCACAATAAAAGGTAATTTAAGGCTATTACCAATCAATGAAA  950

seq1  GATGTCCCAGTCTAAAATGAGATGGAAATAATTTATGGGGATTTTCCAGT  1000
      ||||| ||||||||||||||||||||||| ||||||||||| ||||||||
seq2  GATGT-CCAGTCTAAAATGAGATGGAAAT-ATTTATGGGGA-TTTCCAGT  997

seq1  CACATTAGAATGCAGATTATTCCACAGGGGGGAATTGACTTCTGCAAAAC  1050
      |||| |||||||||||||||| |||||||||  | ||||| |||| ||||
seq2  CACA-TAGAATGCAGATTATT-CACAGGGGG--AATGACTCCTGC-AAAC  1042

seq1  TGCAAGCATCATATATTTTCTAATAAGTTCTCACAG-CTGAAACAATGTC  1099
      ||| ||||||||||||||||| || |||  |||||| |||||||||||||
seq2  TGC-AGCATCATATATTTTCTTAT-AGTCTTCACAGCCTGAAACAATGTC  1090

seq1  ATTATTGGAAGGGAGCACAGGAAATTCTGTG-------------------  1130
      | |||       ||||| || |||||||||                    
seq2  AATAT----CACGAGCATAGTAAATTCTGTCAAGCTGAGACTTACAATAA  1136

seq1  -------------------------  1130
                               
seq2  TGCTGGCAAAGAAGGAAATTCTGTG  1161


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