BAC Information

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BAC

Clone NameB6Ng01-294H19
Chromosome16 (Build37)
Map Location 80,821,397 - 80,822,570
singlet/doubletsinglet
Overlap genenone
Upstream geneEG383172, 1700066C05Rik, LOC621365
Downstream geneLOC100039724, Ncam2, LOC621470
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294H19.bB6Ng01-294H19.g
ACCGA090600GA090601
length1,185562
definitionB6Ng01-294H19.b B6Ng01-294H19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatacaaacatggtttgagtaataatacatctacagtcaattgc
tgattcaattcttgtttactgatttagctatatgtatctgcctttacttg
gatgtcttcaaacacttcaccttttcaacaaagagacaggactgaactcc
cttctttagtttaggacttttctgtgactgatttgtctgagaggatatgt
caggaatcaggctgtgatcatttccaggctcatgcttggcatgtgatcac
aatccccacttctaatctttttggaacaatctcttcaagctcagccaaat
gttgagaagagccccaagcagtatttcagaaattctcattaagaaagaag
ctgataactagggatggcagcttcagttcagcttccaccaatatgagcga
gaggttgaaggcctttttcccaccccagccagcaaaatcatctgagactg
tgtgcaaactatccgaatgaagtcctgatggagttgcatatctatgatca
agttcagcattgctttaagacattgttatttatgagtgtgaccacactac
tgcagaaaaatggaagatcatcccagttacttagtacaacatagaaatgt
ccaacactctccttgtttatgatatttggttatgcttgctgattttaaag
tattttatgtattatacatatttatgaagtgcagagtgatgattcagttt
gtgtatgtgattctcacactgtagggaacacagttcatatttcttgtaca
aacaaatattaggcaggtatgctgacccatgtctaacctcaatgctctga
aatcagatagaggaatctcaagggcaagtttggttgcttgtctcactgaa
ttattgaattttgaatacaagacagtaagattgccataggaagatggggc
acaactgaaggaatcaatattaccatccagtttttcacaagcatacaaat
atgcatctttactctcccagagtgctcctatacatgtcctaacacacata
gtactgttactgcacacacatacccataaataaatttaaactttattaga
tgataatatcagtataaatggagtgaccaaattcagtatatattgcattc
ccatttctttacacgtttattcatttcttttgtggtttgggcacgtttga
tttttcaatttcttaccttatggcttaatttttat

cctctctccactgtagggtatttcatctaaggtctctctctctctctctc
tctctctctctctctctctctctctctctctctctctctattctttcttc
tctcaggtttctgggacatacgagaatgtccacctctatttctatctccc
ttttttctcctccttttattttattctgagacactctccacatgacatcc
gggctcccacactcactcccctccacatacctgatcgggttccagtttaa
caaaaacctccctgccgtgagtgatagaaataaatccataaaccctcaat
gagtgttttcttctctcacaaaagaggaaataaagacacctctctagaga
tatctagatagcgcaacttcttactctttgaccaaaagagagagagtatt
ctgtacatatgtggtcaatatccctaattaccttgcatggtctgtgggga
cagacttacctcactaggatattatttttgagtttctattatttatctac
acaacccaccccgcctttgttatatatatatgaatattcttccactgaga
gtcatcgatttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_80821397_80822570
seq2: B6Ng01-294H19.b_46_1230 (reverse)

seq1  --ATAAATTTAACCATAAG--TAGAAATGAAAAATTCAAAAGTGCCCAA-  45
        | ||||| | |||||||   ||||||  |||| ||||| |||||||| 
seq2  ATAAAAATTAAGCCATAAGGTAAGAAATTGAAAAATCAAACGTGCCCAAA  50

seq1  -CAC-AAAGAAATG-ATAAACGTGT-AAGGAATGGGAATGCATATTATAC  91
       ||| ||||||||| |||||||||| ||| ||||||||||||   |||||
seq2  CCACAAAAGAAATGAATAAACGTGTAAAGAAATGGGAATGCAATATATAC  100

seq1  TG-ATTTTGTCACTCATTTTATACTGATATTTATCATTTTATTAAGTTT-  139
      || |||| |||||||  |||||||||||| ||||||| | || |||||| 
seq2  TGAATTTGGTCACTCCATTTATACTGATA-TTATCATCTAATAAAGTTTA  149

seq1  AATTTATTTATGGGTATGTGTGTGCAGTAACAGTACTATGTGTGTTAGGA  189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTTATGGGTATGTGTGTGCAGTAACAGTACTATGTGTGTTAGGA  199

seq1  CATGTATAGGAGCACTCTGGGAGAGTAAAGATGCATATTTGTATGCTTGT  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATAGGAGCACTCTGGGAGAGTAAAGATGCATATTTGTATGCTTGT  249

seq1  GAAAAACTGGATGGTAATATTGATTCCTTCAGTTGTGCCCCATCTTCCTA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACTGGATGGTAATATTGATTCCTTCAGTTGTGCCCCATCTTCCTA  299

seq1  TGGCAATCTTACTGTCTTGTATTCAAAATTCAATAATTCAGTGAGACAAG  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAATCTTACTGTCTTGTATTCAAAATTCAATAATTCAGTGAGACAAG  349

seq1  CAACC-AACTTGCCCTTGAGATTCCTCTATCTGATTTCAGAGCATTGAGG  388
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAAACTTGCCCTTGAGATTCCTCTATCTGATTTCAGAGCATTGAGG  399

seq1  TTAGACATGGGTCAGCATACCTGCCTAATATTTGTTTGTACAAGAAATAT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACATGGGTCAGCATACCTGCCTAATATTTGTTTGTACAAGAAATAT  449

seq1  GAACTGTGTTCCCTACAGTGTGAGAATCACATACACAAACTGAATCATCA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTGTTCCCTACAGTGTGAGAATCACATACACAAACTGAATCATCA  499

seq1  CTCTGCACTTCATAAATATGTATAATACATAAAATACTTTAAAATCAGCA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCACTTCATAAATATGTATAATACATAAAATACTTTAAAATCAGCA  549

seq1  AGCATAACCAAATATCATAAACAAGGAGAGTGTTGGACATTTCTATGTTG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAACCAAATATCATAAACAAGGAGAGTGTTGGACATTTCTATGTTG  599

seq1  TACTAAGTAACTGGGATGATCTTCCATTTTTCTGCAGTAGTGTGGTCACA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGTAACTGGGATGATCTTCCATTTTTCTGCAGTAGTGTGGTCACA  649

seq1  CTCATAAATAACAATGTCTTAAAGCAATGCTGAACTTGATCATAGATATG  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAAATAACAATGTCTTAAAGCAATGCTGAACTTGATCATAGATATG  699

seq1  CAACTCCATCAGGACTTCATTCGGATAGTTTGCACACAGTCTCAGATGAT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCATCAGGACTTCATTCGGATAGTTTGCACACAGTCTCAGATGAT  749

seq1  TTTGCTGGCTGGGGTGGGAAAAAGGCCTTCAACCTCTCGCTCATATTGGT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGGCTGGGGTGGGAAAAAGGCCTTCAACCTCTCGCTCATATTGGT  799

seq1  GGAAGCTGAACTGAAGCTGCCATCCCTAGTTATCAGCTTCTTTCTTAATG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTGAACTGAAGCTGCCATCCCTAGTTATCAGCTTCTTTCTTAATG  849

seq1  AGAATTTCTGAAATACTGCTTGGGGCTCTTCTCAACATTTGGCTGAGCTT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCTGAAATACTGCTTGGGGCTCTTCTCAACATTTGGCTGAGCTT  899

seq1  GAAGAGATTGTTCCAAAAAGATTAGAAGTGGGGATTGTGATCACATGCCA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGATTGTTCCAAAAAGATTAGAAGTGGGGATTGTGATCACATGCCA  949

seq1  AGCATGAGCCTGGAAATGATCACAGCCTGATTCCTGACATATCCTCTCAG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGAGCCTGGAAATGATCACAGCCTGATTCCTGACATATCCTCTCAG  999

seq1  ACAAATCAGTCACAGAAAAGTCCTAAACTAAAGAAGGGAGTTCAGTCCTG  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCAGTCACAGAAAAGTCCTAAACTAAAGAAGGGAGTTCAGTCCTG  1049

seq1  TCTCTTTGTTGAAAAGGTGAAGTGTTTGAAGACATCCAAGTAAAGGCAGA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTGTTGAAAAGGTGAAGTGTTTGAAGACATCCAAGTAAAGGCAGA  1099

seq1  TACATATAGCTAAATCAGTAAACAAGAATTGAATCAGCAATTGACTGTAG  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATAGCTAAATCAGTAAACAAGAATTGAATCAGCAATTGACTGTAG  1149

seq1  ATGTATTATTACTCAAACCATGTTTGTATGGAATTC  1174
      ||||||||||||||||||||||||||||||||||||
seq2  ATGTATTATTACTCAAACCATGTTTGTATGGAATTC  1185


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