BAC Information

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BAC

Clone NameB6Ng01-297A19
Chromosome16 (Build37)
Map Location 87,363,948 - 87,364,927
singlet/doubletsinglet
Overlap geneN6amt1
Upstream genenone
Downstream geneZfp294, ORF5, LOC100040088, Usp16, Cct8, B130034C11Rik, LOC435486, ORF63, Bach1, LOC100039901, Grik1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297A19.bB6Ng01-297A19.g
ACCGA092507GA092508
length1,173978
definitionB6Ng01-297A19.b B6Ng01-297A19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagaaaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctgcactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccgggcctagcaaaca
cagaagtggatgcccacagtcaactatggatggatacaggctcccaatgg
aggagctagagaagtacccaagagctaaagggatctgcaaccctatagtg
atcaacattatgactaccagtacctcggagcccttgactctagctgcata
tgtatcaaagatgcctagtcgcccatcactgcaagaaaggcctatgacac
tataactttatgctctaaacagggtaacgctcaggctcaaaaatggggga
tggggccgatgatggaattgctg
gaattccactttgcttcgggactctggagacctccctttaattctgggct
gatgccccgtgctttaattctgggcaagctgctcctgctcagtgctctca
gcactactccatccttttgtaggaactggtctggctatttcagcaggtgt
gacgctttgggtcagtccctgtcaggcctctctacccgctgctccagaat
gcagtggggcttcctgcgataagattccaggctactgagccagccccatt
tatctgtttataactgagatgacttcaagaatgtctggcaccagcccaac
cctggggccaaagaagagagtattccatttcagaaggagtcaggcatatg
ctagtggccatctggttgcttgctccctgggccagcaaatgggtccatcc
ttggtccctaagggaccacaggtacaagcctcagcacttgatttcaagtg
tctgaatgtgatagtgaatacagagatttttaaggctccaattcttatgt
cttctggatgtcatctctaagtctttatttttaacccttgctaaaggtta
agctagtcgtcgttacaggcaagcacctttacctgctgagccatcttgct
ggaaatacattgagacgccaagtgggtcaccgtgttctcagaactgtttc
ctcaatgactgttttctctgtatgaactgaaaccatgaccatgaattccc
tcttgctctgcacacgggctctgtctgcttcagtttttatcctctaagtg
aatgatttgtgtttgcttggaggtagggtctcactgtatagccctggctg
gcctggaactcagatctgcctgcctttgcctcctgagactgggggactaa
aggcaccaccacggccagctattgaatgggtttaaaatagatgttaaagg
actggaatcactggccggaaccctgtttaaaattgattgacttcctgtgt
ggctgtgtgtgggtgtggaatgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_87363948_87364927
seq2: B6Ng01-297A19.g_68_1045 (reverse)

seq1  CACACACATCCCACACCCACACACAGCCACACAGGAAGTCAATCAATTTT  50
      ||||||||| |||||||||||||||||||||||||||||||||||| |||
seq2  CACACACATTCCACACCCACACACAGCCACACAGGAAGTCAATCAA-TTT  49

seq1  TAAACAGGGTTCCGGCCAGTGATTCCAGTCC-TTAACATCTATTTTTAAA  99
      ||||||||||||||||||||||||||||||| ||||||||||||||  ||
seq2  TAAACAGGGTTCCGGCCAGTGATTCCAGTCCTTTAACATCTATTTT--AA  97

seq1  AACCATTCAATAGCTGGCCGTGGTGGTGCCTTTAGTCCCCCAGTCTCAGG  149
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTCAATAGCTGGCCGTGGTGGTGCCTTTAGTCCCCCAGTCTCAGG  147

seq1  AGGCAAAGGCAGGCAGATCTGAGTTCCAGGCCAGCCAGGGCTATACAGTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAGGCAGGCAGATCTGAGTTCCAGGCCAGCCAGGGCTATACAGTG  197

seq1  AGACCCTACCTCCAAGCAAACACAAATCATTCACTTAGAGGATAAAAACT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTACCTCCAAGCAAACACAAATCATTCACTTAGAGGATAAAAACT  247

seq1  GAAGCAGACAGAGCCCGTGTGCAGAGCAAGAGGGAATTCATGGTCATGGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGACAGAGCCCGTGTGCAGAGCAAGAGGGAATTCATGGTCATGGT  297

seq1  TTCAGTTCATACAGAGAAAACAGTCATTGAGGAAACAGTTCTGAGAACAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTCATACAGAGAAAACAGTCATTGAGGAAACAGTTCTGAGAACAC  347

seq1  GGTGACCCACTTGGCGTCTCAATGTATTTCCAGCAAGATGGCTCAGCAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACCCACTTGGCGTCTCAATGTATTTCCAGCAAGATGGCTCAGCAGG  397

seq1  TAAAGGTGCTTGCCTGTAACGACGACTAGCTTAACCTTTAGCAAGGGTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGCTTGCCTGTAACGACGACTAGCTTAACCTTTAGCAAGGGTTA  447

seq1  AAAATAAAGACTTAGAGATGACATCCAGAAGACATAAGAATTGGAGCCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAGACTTAGAGATGACATCCAGAAGACATAAGAATTGGAGCCTT  497

seq1  AAAAATCTCTGTATTCACTATCACATTCAGACACTTGAAATCAAGTGCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCTCTGTATTCACTATCACATTCAGACACTTGAAATCAAGTGCTG  547

seq1  AGGCTTGTACCTGTGGTCCCTTAGGGACCAAGGATGGACCCATTTGCTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGTACCTGTGGTCCCTTAGGGACCAAGGATGGACCCATTTGCTGG  597

seq1  CCCAGGGAGCAAGCAACCAGATGGCCACTAGCATATGCCTGACTCCTTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGAGCAAGCAACCAGATGGCCACTAGCATATGCCTGACTCCTTCT  647

seq1  GAAATGGAATACTCTCTTCTTTGGCCCCAGGGTTGGGCTGGTGCCAGACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGAATACTCTCTTCTTTGGCCCCAGGGTTGGGCTGGTGCCAGACA  697

seq1  TTCTTGAAGTCATCTCAGTTATAAACAGATAAATGGGGCTGGCTCAGTAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAAGTCATCTCAGTTATAAACAGATAAATGGGGCTGGCTCAGTAG  747

seq1  CCTGGAATCTTATCGCAGGAAGCCCCACTGCATTCTGGAGCAGCGGGTAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAATCTTATCGCAGGAAGCCCCACTGCATTCTGGAGCAGCGGGTAG  797

seq1  AGAGGCCTGACAGGGACTGACCCAAAGCGTCACACCTGCTGAAATAGCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCTGACAGGGACTGACCCAAAGCGTCACACCTGCTGAAATAGCCA  847

seq1  GACCAGTTCCTACAAAAGGATGGAGTAGTGCTGAGAGCACTGAGCAGGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGTTCCTACAAAAGGATGGAGTAGTGCTGAGAGCACTGAGCAGGAG  897

seq1  CAGCTTGCCCAGAATTAAAGCACGGGGCATCAGCCCAGAATTAAAGGGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTGCCCAGAATTAAAGCACGGGGCATCAGCCCAGAATTAAAGGGAG  947

seq1  GTCTCCAGAGTCCCGAAGCAAAGTGGAATTC  980
      |||||||||||||||||||||||||||||||
seq2  GTCTCCAGAGTCCCGAAGCAAAGTGGAATTC  978